data_8G4 # _chem_comp.id 8G4 _chem_comp.name "(1S,2S,5R)-8'-[(3-chloro-4-fluorophenyl)methyl]-2'-[2-(2,5-dioxo-2,5-dihydro-1H-pyrrol-1-yl)ethyl]-6'-hydroxy-9',10'-dihydro-2'H-spiro[bicyclo[3.1.0]hexane-2,3'-imidazo[5,1-a][2,6]naphthyridine]-1',5',7'(8'H)-trione" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H24 Cl F N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-02-03 _chem_comp.pdbx_modified_date 2017-03-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 566.965 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8G4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5UOP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8G4 F F1 F 0 1 N N N 38.284 -41.143 21.893 6.940 2.479 -2.399 F 8G4 1 8G4 CL CL1 CL 0 0 N N N 37.967 -40.378 19.090 6.203 3.852 0.105 CL 8G4 2 8G4 C1 C1 C 0 1 N N N 33.433 -36.484 19.889 2.994 -2.068 0.641 C1 8G4 3 8G4 N1 N1 N 0 1 N N N 29.146 -36.534 19.848 -1.209 -1.998 -0.083 N1 8G4 4 8G4 O1 O1 O 0 1 N N N 29.174 -36.306 17.577 -1.106 -4.033 -0.979 O1 8G4 5 8G4 C2 C2 C 0 1 N N N 31.974 -36.518 19.911 1.543 -2.070 0.359 C2 8G4 6 8G4 N2 N2 N 0 1 N N N 27.622 -36.698 21.455 -2.793 -0.315 0.381 N2 8G4 7 8G4 O2 O2 O 0 1 N N N 29.003 -36.853 23.286 -1.347 1.213 1.254 O2 8G4 8 8G4 C3 C3 C 0 1 N N N 31.190 -36.613 21.139 0.775 -0.933 0.696 C3 8G4 9 8G4 N3 N3 N 0 1 N N N 26.916 -34.787 23.543 -5.256 2.405 -0.290 N3 8G4 10 8G4 C4 C4 C 0 1 N N N 31.942 -36.633 22.442 1.468 0.270 1.284 C4 8G4 11 8G4 C5 C5 C 0 1 N N N 29.846 -36.629 21.032 -0.570 -0.917 0.481 C5 8G4 12 8G4 C6 C6 C 0 1 N N N 29.788 -36.429 18.628 -0.526 -3.099 -0.455 C6 8G4 13 8G4 C7 C7 C 0 1 N N N 31.230 -36.439 18.690 0.926 -3.163 -0.223 C7 8G4 14 8G4 C8 C8 C 0 1 N N S 27.657 -36.553 19.979 -2.629 -1.660 -0.158 C8 8G4 15 8G4 C10 C9 C 0 1 N N N 26.362 -36.791 22.193 -4.054 0.423 0.491 C10 8G4 16 8G4 C11 C10 C 0 1 N N N 25.876 -35.458 22.750 -3.996 1.666 -0.400 C11 8G4 17 8G4 C12 C11 C 0 1 N N N 27.713 -33.753 23.061 -6.339 2.211 -1.065 C12 8G4 18 8G4 C25 C12 C 0 1 Y N N 37.583 -39.999 21.732 6.466 1.646 -1.447 C25 8G4 19 8G4 C24 C13 C 0 1 Y N N 37.094 -39.349 22.833 6.371 0.289 -1.698 C24 8G4 20 8G4 C23 C14 C 0 1 Y N N 36.401 -38.165 22.654 5.885 -0.562 -0.723 C23 8G4 21 8G4 C26 C15 C 0 1 Y N N 37.392 -39.499 20.463 6.078 2.151 -0.215 C26 8G4 22 8G4 C27 C16 C 0 1 Y N N 36.713 -38.310 20.291 5.592 1.297 0.758 C27 8G4 23 8G4 C22 C17 C 0 1 Y N N 36.203 -37.627 21.390 5.493 -0.058 0.503 C22 8G4 24 8G4 C21 C18 C 0 1 N N N 35.453 -36.327 21.226 4.963 -0.987 1.565 C21 8G4 25 8G4 N N4 N 0 1 N N N 34.003 -36.502 21.109 3.509 -1.104 1.429 N 8G4 26 8G4 O5 O3 O 0 1 N N N 34.091 -36.436 18.864 3.712 -2.928 0.172 O5 8G4 27 8G4 O O4 O 0 1 N N N 31.850 -36.377 17.496 1.638 -4.261 -0.571 O 8G4 28 8G4 C19 C19 C 0 1 N N S 27.160 -37.744 19.111 -3.480 -2.678 0.616 C19 8G4 29 8G4 C20 C20 C 0 1 N N N 25.797 -38.355 19.147 -4.826 -2.226 1.186 C20 8G4 30 8G4 C18 C21 C 0 1 N N S 26.082 -37.225 18.218 -4.772 -2.874 -0.199 C18 8G4 31 8G4 C17 C22 C 0 1 N N N 25.717 -35.821 18.694 -4.660 -1.951 -1.431 C17 8G4 32 8G4 C16 C23 C 0 1 N N N 26.978 -35.304 19.383 -3.135 -1.739 -1.612 C16 8G4 33 8G4 C9 C24 C 0 1 N N N 28.837 -36.742 22.079 -1.578 0.126 0.760 C9 8G4 34 8G4 C C25 C 0 1 N N N 33.349 -37.160 22.243 2.644 -0.174 2.150 C 8G4 35 8G4 C15 C26 C 0 1 N N N 27.218 -35.140 24.858 -5.510 3.376 0.605 C15 8G4 36 8G4 O3 O5 O 0 1 N N N 26.679 -36.060 25.468 -4.738 3.784 1.449 O3 8G4 37 8G4 C14 C27 C 0 1 N N N 28.321 -34.237 25.338 -6.890 3.864 0.386 C14 8G4 38 8G4 C13 C28 C 0 1 N N N 28.654 -33.341 24.159 -7.398 3.148 -0.630 C13 8G4 39 8G4 O4 O6 O 0 1 N N N 27.630 -33.288 21.933 -6.431 1.405 -1.968 O4 8G4 40 8G4 H1 H1 H 0 1 N N N 31.993 -35.611 22.845 1.833 0.907 0.478 H1 8G4 41 8G4 H2 H2 H 0 1 N N N 31.411 -37.281 23.155 0.762 0.830 1.896 H2 8G4 42 8G4 H3 H3 H 0 1 N N N 25.591 -37.185 21.515 -4.878 -0.215 0.171 H3 8G4 43 8G4 H4 H4 H 0 1 N N N 26.502 -37.487 23.033 -4.208 0.725 1.526 H4 8G4 44 8G4 H5 H5 H 0 1 N N N 25.590 -34.805 21.912 -3.841 1.364 -1.436 H5 8G4 45 8G4 H6 H6 H 0 1 N N N 25.000 -35.638 23.391 -3.172 2.304 -0.080 H6 8G4 46 8G4 H7 H7 H 0 1 N N N 37.246 -39.753 23.823 6.677 -0.106 -2.655 H7 8G4 47 8G4 H8 H8 H 0 1 N N N 36.006 -37.648 23.516 5.812 -1.622 -0.919 H8 8G4 48 8G4 H9 H9 H 0 1 N N N 36.577 -37.908 19.298 5.290 1.689 1.718 H9 8G4 49 8G4 H10 H10 H 0 1 N N N 35.818 -35.826 20.317 5.419 -1.970 1.448 H10 8G4 50 8G4 H11 H11 H 0 1 N N N 35.658 -35.693 22.101 5.205 -0.589 2.550 H11 8G4 51 8G4 H12 H12 H 0 1 N N N 32.791 -36.380 17.627 1.107 -4.964 -0.970 H12 8G4 52 8G4 H13 H13 H 0 1 N N N 27.951 -38.339 18.630 -2.957 -3.510 1.088 H13 8G4 53 8G4 H14 H14 H 0 1 N N N 25.147 -38.198 20.020 -5.250 -2.814 2.000 H14 8G4 54 8G4 H15 H15 H 0 1 N N N 25.638 -39.368 18.748 -5.018 -1.154 1.231 H15 8G4 55 8G4 H16 H16 H 0 1 N N N 26.139 -37.417 17.136 -5.202 -3.864 -0.351 H16 8G4 56 8G4 H17 H17 H 0 1 N N N 25.450 -35.180 17.841 -5.084 -2.435 -2.310 H17 8G4 57 8G4 H18 H18 H 0 1 N N N 24.876 -35.858 19.402 -5.157 -1.000 -1.241 H18 8G4 58 8G4 H19 H19 H 0 1 N N N 27.642 -34.815 18.655 -2.935 -0.807 -2.141 H19 8G4 59 8G4 H20 H20 H 0 1 N N N 26.717 -34.590 20.179 -2.686 -2.585 -2.132 H20 8G4 60 8G4 H21 H21 H 0 1 N N N 33.304 -38.243 22.053 3.224 0.701 2.440 H21 8G4 61 8G4 H22 H22 H 0 1 N N N 33.935 -36.972 23.154 2.263 -0.663 3.046 H22 8G4 62 8G4 H23 H23 H 0 1 N N N 28.780 -34.228 26.316 -7.394 4.641 0.942 H23 8G4 63 8G4 H24 H24 H 0 1 N N N 29.409 -32.569 24.117 -8.387 3.242 -1.053 H24 8G4 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8G4 O C7 SING N N 1 8G4 O1 C6 DOUB N N 2 8G4 C18 C17 SING N N 3 8G4 C18 C19 SING N N 4 8G4 C18 C20 SING N N 5 8G4 C6 C7 SING N N 6 8G4 C6 N1 SING N N 7 8G4 C7 C2 DOUB N N 8 8G4 C17 C16 SING N N 9 8G4 O5 C1 DOUB N N 10 8G4 CL C26 SING N N 11 8G4 C19 C20 SING N N 12 8G4 C19 C8 SING N N 13 8G4 C16 C8 SING N N 14 8G4 N1 C8 SING N N 15 8G4 N1 C5 SING N N 16 8G4 C1 C2 SING N N 17 8G4 C1 N SING N N 18 8G4 C2 C3 SING N N 19 8G4 C8 N2 SING N N 20 8G4 C27 C26 DOUB Y N 21 8G4 C27 C22 SING Y N 22 8G4 C26 C25 SING Y N 23 8G4 C5 C3 DOUB N N 24 8G4 C5 C9 SING N N 25 8G4 N C21 SING N N 26 8G4 N C SING N N 27 8G4 C3 C4 SING N N 28 8G4 C21 C22 SING N N 29 8G4 C22 C23 DOUB Y N 30 8G4 N2 C9 SING N N 31 8G4 N2 C10 SING N N 32 8G4 C25 F SING N N 33 8G4 C25 C24 DOUB Y N 34 8G4 O4 C12 DOUB N N 35 8G4 C9 O2 DOUB N N 36 8G4 C10 C11 SING N N 37 8G4 C C4 SING N N 38 8G4 C23 C24 SING Y N 39 8G4 C11 N3 SING N N 40 8G4 C12 N3 SING N N 41 8G4 C12 C13 SING N N 42 8G4 N3 C15 SING N N 43 8G4 C13 C14 DOUB N N 44 8G4 C15 C14 SING N N 45 8G4 C15 O3 DOUB N N 46 8G4 C4 H1 SING N N 47 8G4 C4 H2 SING N N 48 8G4 C10 H3 SING N N 49 8G4 C10 H4 SING N N 50 8G4 C11 H5 SING N N 51 8G4 C11 H6 SING N N 52 8G4 C24 H7 SING N N 53 8G4 C23 H8 SING N N 54 8G4 C27 H9 SING N N 55 8G4 C21 H10 SING N N 56 8G4 C21 H11 SING N N 57 8G4 O H12 SING N N 58 8G4 C19 H13 SING N N 59 8G4 C20 H14 SING N N 60 8G4 C20 H15 SING N N 61 8G4 C18 H16 SING N N 62 8G4 C17 H17 SING N N 63 8G4 C17 H18 SING N N 64 8G4 C16 H19 SING N N 65 8G4 C16 H20 SING N N 66 8G4 C H21 SING N N 67 8G4 C H22 SING N N 68 8G4 C14 H23 SING N N 69 8G4 C13 H24 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8G4 SMILES ACDLabs 12.01 "Fc1ccc(cc1Cl)CN2C(C=7C(CC2)=C3N(C6(N(C3=O)CCN4C(C=CC4=O)=O)C5CC5CC6)C(=O)C=7O)=O" 8G4 InChI InChI 1.03 "InChI=1S/C28H24ClFN4O6/c29-18-11-14(1-2-19(18)30)13-31-8-6-16-22(25(31)38)24(37)27(40)34-23(16)26(39)33(28(34)7-5-15-12-17(15)28)10-9-32-20(35)3-4-21(32)36/h1-4,11,15,17,37H,5-10,12-13H2/t15-,17+,28+/m1/s1" 8G4 InChIKey InChI 1.03 PTJSQLXTSPVZSQ-AFRUXQHESA-N 8G4 SMILES_CANONICAL CACTVS 3.385 "OC1=C2C(=O)N(CCC2=C3N(C1=O)[C@]4(CC[C@@H]5C[C@H]45)N(CCN6C(=O)C=CC6=O)C3=O)Cc7ccc(F)c(Cl)c7" 8G4 SMILES CACTVS 3.385 "OC1=C2C(=O)N(CCC2=C3N(C1=O)[C]4(CC[CH]5C[CH]45)N(CCN6C(=O)C=CC6=O)C3=O)Cc7ccc(F)c(Cl)c7" 8G4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(c(cc1CN2CCC3=C4C(=O)N([C@]5(N4C(=O)C(=C3C2=O)O)CC[C@H]6[C@@H]5C6)CCN7C(=O)C=CC7=O)Cl)F" 8G4 SMILES "OpenEye OEToolkits" 2.0.6 "c1cc(c(cc1CN2CCC3=C4C(=O)N(C5(N4C(=O)C(=C3C2=O)O)CCC6C5C6)CCN7C(=O)C=CC7=O)Cl)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 8G4 "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S,5R)-8'-[(3-chloro-4-fluorophenyl)methyl]-2'-[2-(2,5-dioxo-2,5-dihydro-1H-pyrrol-1-yl)ethyl]-6'-hydroxy-9',10'-dihydro-2'H-spiro[bicyclo[3.1.0]hexane-2,3'-imidazo[5,1-a][2,6]naphthyridine]-1',5',7'(8'H)-trione" 8G4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(1'~{S},3~{S},5'~{R})-2-[2-[2,5-bis(oxidanylidene)pyrrol-1-yl]ethyl]-8-[(3-chloranyl-4-fluoranyl-phenyl)methyl]-6-oxidanyl-spiro[9,10-dihydroimidazo[5,1-a][2,6]naphthyridine-3,2'-bicyclo[3.1.0]hexane]-1,5,7-trione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8G4 "Create component" 2017-02-03 RCSB 8G4 "Initial release" 2017-03-29 RCSB #