data_8I7 # _chem_comp.id 8I7 _chem_comp.name "(1R,2S,5S)-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(3-methylbutanoyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H44 N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-09-16 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 492.651 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8I7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7S75 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8I7 C1 C1 C 0 1 N N N N N N -7.211 -19.896 -17.944 -5.727 -1.280 -1.169 C1 8I7 1 8I7 C11 C2 C 0 1 N N S N N N -9.635 -17.217 -19.126 -2.530 -0.072 0.556 C11 8I7 2 8I7 C12 C3 C 0 1 N N N N N N -9.681 -15.994 -18.248 -1.139 -0.173 -0.017 C12 8I7 3 8I7 C13 C4 C 0 1 N N N N N N -8.208 -14.755 -19.871 -0.472 2.107 0.888 C13 8I7 4 8I7 C14 C5 C 0 1 N N S N N N -9.190 -13.647 -17.946 1.082 0.983 -0.452 C14 8I7 5 8I7 C15 C6 C 0 1 N N N N N N -10.611 -13.160 -18.065 2.128 0.660 0.585 C15 8I7 6 8I7 C16 C7 C 0 1 N N S N N N -7.603 -13.354 -19.816 0.161 3.204 0.005 C16 8I7 7 8I7 C17 C8 C 0 1 N N S N N N -12.594 -12.228 -17.004 4.407 0.070 1.213 C17 8I7 8 8I7 C18 C9 C 0 1 N N N N N N -6.742 -13.044 -18.578 -0.044 3.119 -1.508 C18 8I7 9 8I7 C19 C10 C 0 1 N N N N N N -13.511 -12.976 -16.027 5.510 -0.779 0.578 C19 8I7 10 8I7 C2 C11 C 0 1 N N N N N N -6.555 -19.248 -16.729 -7.138 -0.712 -1.004 C2 8I7 11 8I7 C20 C12 C 0 1 N N S N N N -13.625 -14.426 -16.467 4.932 -2.130 0.151 C20 8I7 12 8I7 C21 C13 C 0 1 N N N N N N -14.467 -14.586 -17.729 6.036 -3.020 -0.467 C21 8I7 13 8I7 C22 C14 C 0 1 N N N N N N -15.260 -15.869 -17.497 5.882 -2.712 -1.972 C22 8I7 14 8I7 C23 C15 C 0 1 N N N N N N -6.214 -14.262 -17.815 -1.152 2.196 -2.019 C23 8I7 15 8I7 C24 C16 C 0 1 N N N N N N -14.316 -15.305 -15.464 3.932 -1.948 -0.969 C24 8I7 16 8I7 C25 C17 C 0 1 N N N N N N -5.671 -12.012 -18.941 0.178 4.396 -2.322 C25 8I7 17 8I7 C26 C18 C 0 1 N N N N N N -11.617 -16.412 -20.453 -2.239 -2.148 1.916 C26 8I7 18 8I7 C3 C19 C 0 1 N N N N N N -6.023 -17.866 -17.087 -8.087 -1.417 -1.975 C3 8I7 19 8I7 C30 C20 C 0 1 N N N N N N -10.997 -17.616 -19.741 -2.540 -0.649 1.973 C30 8I7 20 8I7 C31 C21 C 0 1 N N N N N N -12.002 -18.127 -18.708 -1.475 0.053 2.818 C31 8I7 21 8I7 C32 C22 C 0 1 N N N N N N -10.782 -18.694 -20.794 -3.917 -0.429 2.602 C32 8I7 22 8I7 C34 C23 C 0 1 N N R N N N -8.226 -12.653 -18.606 1.186 2.463 -0.878 C34 8I7 23 8I7 C4 C24 C 0 1 N N N N N N -5.440 -20.124 -16.162 -7.615 -0.940 0.432 C4 8I7 24 8I7 C8 C25 C 0 1 N N N N N N -12.542 -10.739 -16.648 5.009 1.370 1.751 C8 8I7 25 8I7 C9 C26 C 0 1 N N N N N N -7.865 -18.854 -18.823 -4.769 -0.503 -0.303 C9 8I7 26 8I7 N10 N1 N 0 1 N N N N N N -9.006 -18.308 -18.389 -3.461 -0.827 -0.286 N10 8I7 27 8I7 N13 N2 N 0 1 N N N N N N -9.067 -14.890 -18.692 -0.277 0.853 0.123 N13 8I7 28 8I7 N16 N3 N 0 1 N N N N N N -11.239 -12.780 -16.955 3.391 0.384 0.205 N16 8I7 29 8I7 N23 N4 N 0 1 N N N N N N -15.237 -16.064 -16.057 4.488 -2.286 -2.145 N23 8I7 30 8I7 O26 O1 O 0 1 N N N N N N -14.027 -15.300 -14.277 2.794 -1.555 -0.827 O26 8I7 31 8I7 O29 O2 O 0 1 N N N N N N -7.353 -18.547 -19.898 -5.175 0.414 0.379 O29 8I7 32 8I7 O33 O3 O 0 1 N N N N N N -10.220 -16.051 -17.157 -0.797 -1.177 -0.604 O33 8I7 33 8I7 O38 O4 O 0 1 N N N N N N -11.152 -13.125 -19.153 1.832 0.650 1.761 O38 8I7 34 8I7 O9 O5 O 0 1 N N N N N N -13.865 -10.206 -16.454 5.711 2.039 0.702 O9 8I7 35 8I7 H1 H1 H 0 1 N N N N N N -7.975 -20.610 -17.603 -5.719 -2.328 -0.869 H1 8I7 36 8I7 H2 H2 H 0 1 N N N N N N -6.445 -20.429 -18.526 -5.422 -1.197 -2.212 H2 8I7 37 8I7 H3 H3 H 0 1 N N N N N N -8.976 -16.973 -19.972 -2.835 0.974 0.587 H3 8I7 38 8I7 H4 H4 H 0 1 N N N N N N -8.802 -14.875 -20.789 0.040 2.049 1.849 H4 8I7 39 8I7 H5 H5 H 0 1 N N N N N N -7.411 -15.513 -19.848 -1.535 2.302 1.034 H5 8I7 40 8I7 H6 H6 H 0 1 N N N N N N -8.920 -13.789 -16.889 1.193 0.329 -1.318 H6 8I7 41 8I7 H7 H7 H 0 1 N N N N N N -7.437 -12.792 -20.747 0.392 4.160 0.476 H7 8I7 42 8I7 H8 H8 H 0 1 N N N N N N -13.000 -12.334 -18.021 3.948 -0.484 2.031 H8 8I7 43 8I7 H9 H9 H 0 1 N N N N N N -13.086 -12.930 -15.014 5.909 -0.262 -0.296 H9 8I7 44 8I7 H10 H10 H 0 1 N N N N N N -14.508 -12.511 -16.027 6.309 -0.937 1.302 H10 8I7 45 8I7 H11 H11 H 0 1 N N N N N N -7.323 -19.127 -15.951 -7.127 0.356 -1.218 H11 8I7 46 8I7 H12 H12 H 0 1 N N N N N N -12.617 -14.821 -16.660 4.467 -2.630 1.001 H12 8I7 47 8I7 H13 H13 H 0 1 N N N N N N -13.824 -14.681 -18.616 7.022 -2.725 -0.107 H13 8I7 48 8I7 H14 H14 H 0 1 N N N N N N -15.144 -13.728 -17.857 5.847 -4.073 -0.262 H14 8I7 49 8I7 H15 H15 H 0 1 N N N N N N -16.294 -15.756 -17.856 6.560 -1.910 -2.265 H15 8I7 50 8I7 H16 H16 H 0 1 N N N N N N -14.784 -16.717 -18.011 6.079 -3.607 -2.562 H16 8I7 51 8I7 H17 H17 H 0 1 N N N N N N -5.616 -13.926 -16.955 -1.955 2.796 -2.449 H17 8I7 52 8I7 H18 H18 H 0 1 N N N N N N -7.061 -14.866 -17.458 -0.748 1.530 -2.781 H18 8I7 53 8I7 H19 H19 H 0 1 N N N N N N -5.586 -14.869 -18.483 -1.544 1.606 -1.191 H19 8I7 54 8I7 H20 H20 H 0 1 N N N N N N -5.057 -11.792 -18.055 0.609 5.165 -1.682 H20 8I7 55 8I7 H21 H21 H 0 1 N N N N N N -5.031 -12.414 -19.740 0.859 4.186 -3.147 H21 8I7 56 8I7 H22 H22 H 0 1 N N N N N N -6.156 -11.088 -19.289 -0.776 4.745 -2.718 H22 8I7 57 8I7 H23 H23 H 0 1 N N N N N N -11.790 -15.605 -19.726 -1.258 -2.304 1.467 H23 8I7 58 8I7 H24 H24 H 0 1 N N N N N N -10.932 -16.058 -21.238 -2.247 -2.559 2.925 H24 8I7 59 8I7 H25 H25 H 0 1 N N N N N N -12.574 -16.708 -20.907 -2.998 -2.648 1.314 H25 8I7 60 8I7 H26 H26 H 0 1 N N N N N N -5.554 -17.413 -16.202 -8.098 -2.486 -1.761 H26 8I7 61 8I7 H27 H27 H 0 1 N N N N N N -5.278 -17.957 -17.891 -9.093 -1.013 -1.858 H27 8I7 62 8I7 H28 H28 H 0 1 N N N N N N -6.854 -17.230 -17.427 -7.748 -1.255 -2.998 H28 8I7 63 8I7 H29 H29 H 0 1 N N N N N N -12.165 -17.355 -17.941 -0.491 -0.127 2.385 H29 8I7 64 8I7 H30 H30 H 0 1 N N N N N N -12.956 -18.356 -19.206 -1.674 1.125 2.836 H30 8I7 65 8I7 H31 H31 H 0 1 N N N N N N -11.608 -19.038 -18.233 -1.502 -0.338 3.835 H31 8I7 66 8I7 H32 H32 H 0 1 N N N N N N -10.336 -19.583 -20.324 -3.925 -0.840 3.612 H32 8I7 67 8I7 H33 H33 H 0 1 N N N N N N -11.748 -18.964 -21.245 -4.132 0.639 2.644 H33 8I7 68 8I7 H34 H34 H 0 1 N N N N N N -10.107 -18.314 -21.575 -4.676 -0.930 2.001 H34 8I7 69 8I7 H35 H35 H 0 1 N N N N N N -8.506 -11.592 -18.677 2.175 2.874 -1.078 H35 8I7 70 8I7 H36 H36 H 0 1 N N N N N N -4.991 -19.627 -15.290 -6.938 -0.438 1.123 H36 8I7 71 8I7 H37 H37 H 0 1 N N N N N N -5.856 -21.095 -15.857 -8.620 -0.536 0.549 H37 8I7 72 8I7 H38 H38 H 0 1 N N N N N N -4.670 -20.281 -16.932 -7.626 -2.009 0.646 H38 8I7 73 8I7 H39 H39 H 0 1 N N N N N N -11.964 -10.611 -15.721 4.212 2.013 2.123 H39 8I7 74 8I7 H40 H40 H 0 1 N Y N N N N -12.050 -10.191 -17.465 5.700 1.141 2.562 H40 8I7 75 8I7 H41 H41 H 0 1 N N N N N N -9.432 -18.651 -17.552 -3.136 -1.561 -0.831 H41 8I7 76 8I7 H42 H42 H 0 1 N N N N N N -10.778 -12.873 -16.073 3.627 0.392 -0.736 H42 8I7 77 8I7 H43 H43 H 0 1 N N N N N N -15.841 -16.694 -15.569 4.028 -2.253 -2.998 H43 8I7 78 8I7 H44 H44 H 0 1 N N N N N N -13.806 -9.284 -16.235 6.120 2.873 0.972 H44 8I7 79 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8I7 C32 C30 SING N N 1 8I7 C26 C30 SING N N 2 8I7 O29 C9 DOUB N N 3 8I7 C13 C16 SING N N 4 8I7 C13 N13 SING N N 5 8I7 C16 C34 SING N N 6 8I7 C16 C18 SING N N 7 8I7 C30 C11 SING N N 8 8I7 C30 C31 SING N N 9 8I7 O38 C15 DOUB N N 10 8I7 C11 N10 SING N N 11 8I7 C11 C12 SING N N 12 8I7 C25 C18 SING N N 13 8I7 C9 N10 SING N N 14 8I7 C9 C1 SING N N 15 8I7 N13 C12 SING N N 16 8I7 N13 C14 SING N N 17 8I7 C34 C18 SING N N 18 8I7 C34 C14 SING N N 19 8I7 C18 C23 SING N N 20 8I7 C12 O33 DOUB N N 21 8I7 C15 C14 SING N N 22 8I7 C15 N16 SING N N 23 8I7 C1 C2 SING N N 24 8I7 C21 C22 SING N N 25 8I7 C21 C20 SING N N 26 8I7 C22 N23 SING N N 27 8I7 C3 C2 SING N N 28 8I7 C17 N16 SING N N 29 8I7 C17 C8 SING N N 30 8I7 C17 C19 SING N N 31 8I7 C2 C4 SING N N 32 8I7 C8 O9 SING N N 33 8I7 C20 C19 SING N N 34 8I7 C20 C24 SING N N 35 8I7 N23 C24 SING N N 36 8I7 C24 O26 DOUB N N 37 8I7 C1 H1 SING N N 38 8I7 C1 H2 SING N N 39 8I7 C11 H3 SING N N 40 8I7 C13 H4 SING N N 41 8I7 C13 H5 SING N N 42 8I7 C14 H6 SING N N 43 8I7 C16 H7 SING N N 44 8I7 C17 H8 SING N N 45 8I7 C19 H9 SING N N 46 8I7 C19 H10 SING N N 47 8I7 C2 H11 SING N N 48 8I7 C20 H12 SING N N 49 8I7 C21 H13 SING N N 50 8I7 C21 H14 SING N N 51 8I7 C22 H15 SING N N 52 8I7 C22 H16 SING N N 53 8I7 C23 H17 SING N N 54 8I7 C23 H18 SING N N 55 8I7 C23 H19 SING N N 56 8I7 C25 H20 SING N N 57 8I7 C25 H21 SING N N 58 8I7 C25 H22 SING N N 59 8I7 C26 H23 SING N N 60 8I7 C26 H24 SING N N 61 8I7 C26 H25 SING N N 62 8I7 C3 H26 SING N N 63 8I7 C3 H27 SING N N 64 8I7 C3 H28 SING N N 65 8I7 C31 H29 SING N N 66 8I7 C31 H30 SING N N 67 8I7 C31 H31 SING N N 68 8I7 C32 H32 SING N N 69 8I7 C32 H33 SING N N 70 8I7 C32 H34 SING N N 71 8I7 C34 H35 SING N N 72 8I7 C4 H36 SING N N 73 8I7 C4 H37 SING N N 74 8I7 C4 H38 SING N N 75 8I7 C8 H39 SING N N 76 8I7 C8 H40 SING N N 77 8I7 N10 H41 SING N N 78 8I7 N16 H42 SING N N 79 8I7 N23 H43 SING N N 80 8I7 O9 H44 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8I7 SMILES ACDLabs 12.01 "CC1(C)C2C(C(=O)NC(CC3CCNC3=O)CO)N(CC21)C(=O)C(NC(=O)CC(C)C)C(C)(C)C" 8I7 InChI InChI 1.03 "InChI=1S/C26H44N4O5/c1-14(2)10-18(32)29-21(25(3,4)5)24(35)30-12-17-19(26(17,6)7)20(30)23(34)28-16(13-31)11-15-8-9-27-22(15)33/h14-17,19-21,31H,8-13H2,1-7H3,(H,27,33)(H,28,34)(H,29,32)/t15-,16-,17-,19-,20-,21+/m0/s1" 8I7 InChIKey InChI 1.03 YJDABKUOTKRKDF-RZCQQDKOSA-N 8I7 SMILES_CANONICAL CACTVS 3.385 "CC(C)CC(=O)N[C@H](C(=O)N1C[C@H]2[C@@H]([C@H]1C(=O)N[C@H](CO)C[C@@H]3CCNC3=O)C2(C)C)C(C)(C)C" 8I7 SMILES CACTVS 3.385 "CC(C)CC(=O)N[CH](C(=O)N1C[CH]2[CH]([CH]1C(=O)N[CH](CO)C[CH]3CCNC3=O)C2(C)C)C(C)(C)C" 8I7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)CC(=O)N[C@H](C(=O)N1C[C@H]2[C@@H]([C@H]1C(=O)N[C@@H](C[C@@H]3CCNC3=O)CO)C2(C)C)C(C)(C)C" 8I7 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(=O)NC(C(=O)N1CC2C(C1C(=O)NC(CC3CCNC3=O)CO)C2(C)C)C(C)(C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 8I7 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S,5S)-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(3-methylbutanoyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" 8I7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S},5~{S})-3-[(2~{S})-3,3-dimethyl-2-(3-methylbutanoylamino)butanoyl]-6,6-dimethyl-~{N}-[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8I7 "Create component" 2021-09-16 RCSB 8I7 "Initial release" 2022-07-27 RCSB 8I7 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 8I7 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C8 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #