data_8IY # _chem_comp.id 8IY _chem_comp.name "(2S,4S)-N-((3R,5R)-1-(cyclopropanecarbonyl)-5-((4-((4-((S)-2-hydroxy-1-methoxyethyl)phenyl)ethynyl)benzamido)methyl)pyrrolidin-3-yl)-4-fluoropyrrolidine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H37 F N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-22 _chem_comp.pdbx_modified_date 2022-11-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 576.658 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8IY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7PZX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8IY C1 C1 C 0 1 N N N -3.248 -8.909 33.924 11.598 -2.298 0.669 C1 8IY 1 8IY C2 C2 C 0 1 N N S -2.241 -9.842 34.578 11.369 -1.044 -0.177 C2 8IY 2 8IY C3 C3 C 0 1 N N N -2.199 -11.777 35.966 13.018 -1.099 -1.916 C3 8IY 3 8IY C4 C4 C 0 1 Y N N -1.214 -10.325 33.565 9.933 -0.606 -0.049 C4 8IY 4 8IY C5 C5 C 0 1 Y N N 0.048 -9.758 33.530 9.603 0.431 0.807 C5 8IY 5 8IY C6 C6 C 0 1 Y N N 0.989 -10.172 32.625 8.291 0.837 0.930 C6 8IY 6 8IY C7 C7 C 0 1 Y N N 0.712 -11.186 31.711 7.293 0.199 0.188 C7 8IY 7 8IY O1 O1 O 0 1 N N N -2.745 -7.588 34.049 10.658 -3.306 0.290 O1 8IY 8 8IY O2 O2 O 0 1 N N N -2.995 -10.905 35.165 11.658 -1.334 -1.546 O2 8IY 9 8IY C8 C8 C 0 1 N N N 1.702 -11.620 30.769 5.928 0.611 0.314 C8 8IY 10 8IY C9 C9 C 0 1 N N N 2.569 -11.980 30.024 4.808 0.949 0.418 C9 8IY 11 8IY C10 C10 C 0 1 Y N N 3.627 -12.505 29.212 3.443 1.362 0.545 C10 8IY 12 8IY C11 C11 C 0 1 Y N N 4.948 -12.105 29.424 3.105 2.409 1.408 C11 8IY 13 8IY C12 C12 C 0 1 Y N N 5.979 -12.651 28.685 1.803 2.802 1.529 C12 8IY 14 8IY C13 C13 C 0 1 Y N N 5.732 -13.600 27.704 0.807 2.157 0.789 C13 8IY 15 8IY C14 C14 C 0 1 N N N 6.896 -14.190 26.954 -0.601 2.583 0.919 C14 8IY 16 8IY N1 N1 N 0 1 N N N 6.776 -15.477 26.588 -1.561 1.962 0.206 N1 8IY 17 8IY C15 C15 C 0 1 N N N 7.873 -16.340 26.163 -2.958 2.384 0.335 C15 8IY 18 8IY C16 C16 C 0 1 N N R 7.347 -17.747 25.890 -3.820 1.609 -0.664 C16 8IY 19 8IY N2 N2 N 0 1 N N N 8.404 -18.726 25.537 -5.199 2.116 -0.634 N2 8IY 20 8IY C17 C17 C 0 1 N N N 9.233 -19.244 26.462 -5.582 3.372 -0.939 C17 8IY 21 8IY C18 C18 C 0 1 N N N 8.862 -19.094 27.894 -7.019 3.787 -0.754 C18 8IY 22 8IY C19 C19 C 0 1 N N N 9.521 -19.973 28.918 -7.324 4.801 0.350 C19 8IY 23 8IY C20 C20 C 0 1 N N N 9.907 -18.557 28.837 -7.390 5.226 -1.118 C20 8IY 24 8IY O3 O3 O 0 1 N N N 10.263 -19.801 26.089 -4.770 4.167 -1.362 O3 8IY 25 8IY C21 C21 C 0 1 N N N 8.451 -19.048 24.108 -6.095 1.022 -0.215 C21 8IY 26 8IY C22 C22 C 0 1 N N R 7.385 -18.112 23.511 -5.337 -0.276 -0.586 C22 8IY 27 8IY N3 N3 N 0 1 N N N 7.935 -16.912 22.904 -5.772 -1.396 0.252 N3 8IY 28 8IY C23 C23 C 0 1 N N N 7.196 -16.027 22.225 -6.846 -2.129 -0.107 C23 8IY 29 8IY C24 C24 C 0 1 N N S 7.961 -14.828 21.679 -7.294 -3.281 0.755 C24 8IY 30 8IY N4 N4 N 0 1 N N N 7.161 -14.102 20.692 -8.669 -3.702 0.383 N4 8IY 31 8IY C25 C25 C 0 1 N N N 6.410 -13.013 21.354 -8.769 -5.099 0.877 C25 8IY 32 8IY C26 C26 C 0 1 N N S 6.900 -12.979 22.780 -7.391 -5.721 0.567 C26 8IY 33 8IY F1 F1 F 0 1 N N N 6.028 -13.671 23.625 -7.428 -6.400 -0.655 F1 8IY 34 8IY C27 C27 C 0 1 N N N 8.201 -13.749 22.745 -6.420 -4.525 0.487 C27 8IY 35 8IY O4 O4 O 0 1 N N N 5.982 -16.140 22.030 -7.451 -1.860 -1.123 O4 8IY 36 8IY C28 C28 C 0 1 N N N 6.434 -17.805 24.674 -3.867 0.117 -0.271 C28 8IY 37 8IY O5 O5 O 0 1 N N N 7.940 -13.547 26.778 -0.894 3.493 1.669 O5 8IY 38 8IY C29 C29 C 0 1 Y N N 4.424 -14.021 27.496 1.143 1.111 -0.075 C29 8IY 39 8IY C30 C30 C 0 1 Y N N 3.379 -13.480 28.242 2.446 0.721 -0.200 C30 8IY 40 8IY C31 C31 C 0 1 Y N N -0.555 -11.758 31.733 7.634 -0.847 -0.674 C31 8IY 41 8IY C32 C32 C 0 1 Y N N -1.505 -11.335 32.654 8.951 -1.239 -0.790 C32 8IY 42 8IY H1 H1 H 0 1 N N N -4.221 -8.991 34.431 12.611 -2.666 0.507 H1 8IY 43 8IY H2 H2 H 0 1 N N N -3.366 -9.168 32.861 11.464 -2.054 1.723 H2 8IY 44 8IY H3 H3 H 0 1 N N N -1.714 -9.285 35.367 12.025 -0.246 0.171 H3 8IY 45 8IY H4 H4 H 0 1 N N N -2.834 -12.570 36.388 13.156 -1.343 -2.969 H4 8IY 46 8IY H5 H5 H 0 1 N N N -1.412 -12.229 35.345 13.264 -0.050 -1.750 H5 8IY 47 8IY H6 H6 H 0 1 N N N -1.737 -11.204 36.783 13.673 -1.725 -1.309 H6 8IY 48 8IY H7 H7 H 0 1 N N N 0.296 -8.974 34.230 10.375 0.923 1.379 H7 8IY 49 8IY H8 H8 H 0 1 N N N 1.962 -9.704 32.620 8.035 1.646 1.598 H8 8IY 50 8IY H9 H9 H 0 1 N N N -3.353 -6.978 33.649 10.745 -4.131 0.787 H9 8IY 51 8IY H10 H10 H 0 1 N N N 5.166 -11.360 30.175 3.874 2.907 1.980 H10 8IY 52 8IY H11 H11 H 0 1 N N N 6.994 -12.334 28.874 1.542 3.610 2.196 H11 8IY 53 8IY H12 H12 H 0 1 N N N 5.859 -15.876 26.609 -1.328 1.235 -0.393 H12 8IY 54 8IY H13 H13 H 0 1 N N N 8.633 -16.382 26.957 -3.307 2.182 1.348 H13 8IY 55 8IY H14 H14 H 0 1 N N N 8.323 -15.934 25.245 -3.036 3.451 0.130 H14 8IY 56 8IY H15 H15 H 0 1 N N N 6.795 -18.102 26.773 -3.408 1.714 -1.668 H15 8IY 57 8IY H16 H16 H 0 1 N N N 7.823 -18.799 28.103 -7.761 3.012 -0.946 H16 8IY 58 8IY H17 H17 H 0 1 N N N 8.944 -20.335 29.782 -8.267 4.694 0.885 H17 8IY 59 8IY H18 H18 H 0 1 N N N 10.228 -20.752 28.597 -6.486 5.167 0.943 H18 8IY 60 8IY H19 H19 H 0 1 N N N 10.901 -18.281 28.455 -6.595 5.872 -1.492 H19 8IY 61 8IY H20 H20 H 0 1 N N N 9.617 -17.863 29.639 -8.376 5.398 -1.549 H20 8IY 62 8IY H21 H21 H 0 1 N N N 8.195 -20.103 23.931 -6.270 1.066 0.860 H21 8IY 63 8IY H22 H22 H 0 1 N N N 9.445 -18.836 23.687 -7.041 1.079 -0.754 H22 8IY 64 8IY H23 H23 H 0 1 N N N 6.824 -18.676 22.751 -5.458 -0.511 -1.643 H23 8IY 65 8IY H24 H24 H 0 1 N N N 8.915 -16.739 22.998 -5.288 -1.611 1.065 H24 8IY 66 8IY H25 H25 H 0 1 N N N 8.920 -15.153 21.249 -7.250 -3.006 1.809 H25 8IY 67 8IY H26 H26 H 0 1 N N N 6.517 -14.733 20.259 -8.802 -3.661 -0.616 H26 8IY 68 8IY H28 H28 H 0 1 N N N 6.612 -12.052 20.857 -8.958 -5.110 1.951 H28 8IY 69 8IY H29 H29 H 0 1 N N N 5.330 -13.221 21.326 -9.556 -5.635 0.347 H29 8IY 70 8IY H30 H30 H 0 1 N N N 7.070 -11.943 23.109 -7.093 -6.399 1.367 H30 8IY 71 8IY H31 H31 H 0 1 N N N 8.413 -14.205 23.723 -5.973 -4.467 -0.505 H31 8IY 72 8IY H32 H32 H 0 1 N N N 9.036 -13.094 22.458 -5.645 -4.615 1.248 H32 8IY 73 8IY H33 H33 H 0 1 N N N 5.926 -16.842 24.520 -3.173 -0.467 -0.875 H33 8IY 74 8IY H34 H34 H 0 1 N N N 5.683 -18.601 24.786 -3.654 -0.006 0.791 H34 8IY 75 8IY H35 H35 H 0 1 N N N 4.216 -14.774 26.750 0.373 0.613 -0.646 H35 8IY 76 8IY H36 H36 H 0 1 N N N 2.368 -13.817 28.069 2.706 -0.088 -0.867 H36 8IY 77 8IY H37 H37 H 0 1 N N N -0.803 -12.538 31.028 6.868 -1.345 -1.250 H37 8IY 78 8IY H38 H38 H 0 1 N N N -2.482 -11.796 32.663 9.216 -2.047 -1.456 H38 8IY 79 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8IY N4 C25 SING N N 1 8IY N4 C24 SING N N 2 8IY C25 C26 SING N N 3 8IY C24 C23 SING N N 4 8IY C24 C27 SING N N 5 8IY O4 C23 DOUB N N 6 8IY C23 N3 SING N N 7 8IY C27 C26 SING N N 8 8IY C26 F1 SING N N 9 8IY N3 C22 SING N N 10 8IY C22 C21 SING N N 11 8IY C22 C28 SING N N 12 8IY C21 N2 SING N N 13 8IY C28 C16 SING N N 14 8IY N2 C16 SING N N 15 8IY N2 C17 SING N N 16 8IY C16 C15 SING N N 17 8IY O3 C17 DOUB N N 18 8IY C15 N1 SING N N 19 8IY C17 C18 SING N N 20 8IY N1 C14 SING N N 21 8IY O5 C14 DOUB N N 22 8IY C14 C13 SING N N 23 8IY C29 C13 DOUB Y N 24 8IY C29 C30 SING Y N 25 8IY C13 C12 SING Y N 26 8IY C18 C20 SING N N 27 8IY C18 C19 SING N N 28 8IY C30 C10 DOUB Y N 29 8IY C12 C11 DOUB Y N 30 8IY C20 C19 SING N N 31 8IY C10 C11 SING Y N 32 8IY C10 C9 SING N N 33 8IY C9 C8 TRIP N N 34 8IY C8 C7 SING N N 35 8IY C7 C31 DOUB Y N 36 8IY C7 C6 SING Y N 37 8IY C31 C32 SING Y N 38 8IY C6 C5 DOUB Y N 39 8IY C32 C4 DOUB Y N 40 8IY C5 C4 SING Y N 41 8IY C4 C2 SING N N 42 8IY C1 O1 SING N N 43 8IY C1 C2 SING N N 44 8IY C2 O2 SING N N 45 8IY O2 C3 SING N N 46 8IY C1 H1 SING N N 47 8IY C1 H2 SING N N 48 8IY C2 H3 SING N N 49 8IY C3 H4 SING N N 50 8IY C3 H5 SING N N 51 8IY C3 H6 SING N N 52 8IY C5 H7 SING N N 53 8IY C6 H8 SING N N 54 8IY O1 H9 SING N N 55 8IY C11 H10 SING N N 56 8IY C12 H11 SING N N 57 8IY N1 H12 SING N N 58 8IY C15 H13 SING N N 59 8IY C15 H14 SING N N 60 8IY C16 H15 SING N N 61 8IY C18 H16 SING N N 62 8IY C19 H17 SING N N 63 8IY C19 H18 SING N N 64 8IY C20 H19 SING N N 65 8IY C20 H20 SING N N 66 8IY C21 H21 SING N N 67 8IY C21 H22 SING N N 68 8IY C22 H23 SING N N 69 8IY N3 H24 SING N N 70 8IY C24 H25 SING N N 71 8IY N4 H26 SING N N 72 8IY C25 H28 SING N N 73 8IY C25 H29 SING N N 74 8IY C26 H30 SING N N 75 8IY C27 H31 SING N N 76 8IY C27 H32 SING N N 77 8IY C28 H33 SING N N 78 8IY C28 H34 SING N N 79 8IY C29 H35 SING N N 80 8IY C30 H36 SING N N 81 8IY C31 H37 SING N N 82 8IY C32 H38 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8IY InChI InChI 1.06 "InChI=1S/C32H37FN4O5/c1-42-29(19-38)22-8-4-20(5-9-22)2-3-21-6-10-23(11-7-21)30(39)35-17-27-15-26(18-37(27)32(41)24-12-13-24)36-31(40)28-14-25(33)16-34-28/h4-11,24-29,34,38H,12-19H2,1H3,(H,35,39)(H,36,40)/t25-,26+,27+,28-,29+/m0/s1" 8IY InChIKey InChI 1.06 HFMBZFMCSBGVPE-MLZSXWJDSA-N 8IY SMILES_CANONICAL CACTVS 3.385 "CO[C@H](CO)c1ccc(cc1)C#Cc2ccc(cc2)C(=O)NC[C@H]3C[C@H](CN3C(=O)C4CC4)NC(=O)[C@@H]5C[C@H](F)CN5" 8IY SMILES CACTVS 3.385 "CO[CH](CO)c1ccc(cc1)C#Cc2ccc(cc2)C(=O)NC[CH]3C[CH](CN3C(=O)C4CC4)NC(=O)[CH]5C[CH](F)CN5" 8IY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CO[C@H](CO)c1ccc(cc1)C#Cc2ccc(cc2)C(=O)NC[C@H]3C[C@H](CN3C(=O)C4CC4)NC(=O)[C@@H]5C[C@@H](CN5)F" 8IY SMILES "OpenEye OEToolkits" 2.0.7 "COC(CO)c1ccc(cc1)C#Cc2ccc(cc2)C(=O)NCC3CC(CN3C(=O)C4CC4)NC(=O)C5CC(CN5)F" # _pdbx_chem_comp_identifier.comp_id 8IY _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},4~{S})-~{N}-[(3~{R},5~{R})-1-cyclopropylcarbonyl-5-[[[4-[2-[4-[(1~{S})-1-methoxy-2-oxidanyl-ethyl]phenyl]ethynyl]phenyl]carbonylamino]methyl]pyrrolidin-3-yl]-4-fluoranyl-pyrrolidine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8IY "Create component" 2021-10-22 PDBE 8IY "Modify descriptor" 2022-08-22 RCSB 8IY "Initial release" 2022-11-23 RCSB #