data_8JY # _chem_comp.id 8JY _chem_comp.name "[2-[[(2~{R})-2-hexanoyloxy-3-[(~{E})-hex-3-enoxy]propoxy]-oxidanyl-phosphoryl]oxy-3,4,5,6-tetrakis(oxidanyl)phenyl] (2~{E},4~{E})-hepta-2,4-dienoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H47 O13 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-12-20 _chem_comp.pdbx_modified_date 2022-02-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 622.639 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8JY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7W72 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8JY C20 C1 C 0 1 N N N 146.701 163.722 189.364 3.526 -2.345 -0.869 C20 8JY 1 8JY C21 C2 C 0 1 N N N 147.932 161.530 192.098 3.000 0.516 0.418 C21 8JY 2 8JY C22 C3 C 0 1 N N N 148.418 162.261 193.384 3.029 2.007 0.197 C22 8JY 3 8JY C17 C4 C 0 1 N N N 147.150 161.171 188.816 1.037 -2.331 -0.656 C17 8JY 4 8JY C18 C5 C 0 1 N N R 147.443 162.374 189.853 2.338 -1.701 -0.154 C18 8JY 5 8JY C01 C6 C 0 1 Y N N 147.348 158.623 184.117 -4.560 -2.596 1.253 C01 8JY 6 8JY C02 C7 C 0 1 Y N N 147.061 158.863 182.775 -5.912 -2.823 1.029 C02 8JY 7 8JY C03 C8 C 0 1 Y N N 146.002 159.744 182.424 -6.596 -2.067 0.086 C03 8JY 8 8JY C04 C9 C 0 1 Y N N 145.243 160.369 183.435 -5.929 -1.083 -0.633 C04 8JY 9 8JY C05 C10 C 0 1 Y N N 145.504 160.160 184.819 -4.576 -0.856 -0.408 C05 8JY 10 8JY C06 C11 C 0 1 Y N N 146.574 159.268 185.187 -3.893 -1.609 0.539 C06 8JY 11 8JY C23 C12 C 0 1 N N N 147.481 162.240 194.649 3.864 2.669 1.295 C23 8JY 12 8JY C24 C13 C 0 1 N N N 146.989 163.644 195.193 3.893 4.182 1.070 C24 8JY 13 8JY C25 C14 C 0 1 N N N 147.149 163.900 196.739 4.728 4.845 2.168 C25 8JY 14 8JY C26 C15 C 0 1 N N N 148.576 163.657 197.310 4.758 6.358 1.943 C26 8JY 15 8JY C29 C16 C 0 1 N N N 145.513 164.751 191.250 5.922 -2.382 -0.920 C29 8JY 16 8JY C30 C17 C 0 1 N N N 145.613 166.291 190.834 7.160 -1.775 -0.255 C30 8JY 17 8JY C31 C18 C 0 1 N N N 146.027 167.247 192.012 8.420 -2.355 -0.899 C31 8JY 18 8JY C32 C19 C 0 1 N N N 145.605 166.758 193.455 9.658 -1.747 -0.235 C32 8JY 19 8JY C33 C20 C 0 1 N N N 145.786 167.783 194.618 10.919 -2.327 -0.879 C33 8JY 20 8JY C34 C21 C 0 1 N N N 145.635 169.266 194.216 12.156 -1.720 -0.215 C34 8JY 21 8JY C35 C22 C 0 1 N N N 144.426 162.166 185.900 -3.904 1.342 -0.585 C35 8JY 22 8JY C36 C23 C 0 1 N N N 143.995 162.981 187.170 -3.198 2.460 -1.307 C36 8JY 23 8JY C38 C24 C 0 1 N N N 142.551 163.647 187.124 -3.327 3.752 -0.497 C38 8JY 24 8JY C39 C25 C 0 1 N N N 142.164 164.574 188.338 -2.611 4.887 -1.231 C39 8JY 25 8JY C40 C26 C 0 1 N N N 141.961 166.093 187.999 -2.739 6.179 -0.421 C40 8JY 26 8JY C41 C27 C 0 1 N N N 141.174 166.932 189.060 -2.023 7.314 -1.155 C41 8JY 27 8JY C42 C28 C 0 1 N N N 140.400 168.154 188.491 -2.152 8.606 -0.345 C42 8JY 28 8JY O07 O1 O 0 1 N N N 146.863 159.018 186.483 -2.570 -1.383 0.764 O07 8JY 29 8JY O08 O2 O 0 1 N N N 148.388 157.762 184.490 -3.890 -3.338 2.178 O08 8JY 30 8JY O09 O3 O 0 1 N N N 147.831 158.228 181.785 -6.567 -3.787 1.733 O09 8JY 31 8JY O10 O4 O 0 1 N N N 145.735 159.967 181.070 -7.922 -2.290 -0.135 O10 8JY 32 8JY O11 O5 O 0 1 N N N 144.200 161.234 183.085 -6.599 -0.342 -1.558 O11 8JY 33 8JY O12 O6 O 0 1 N N N 144.712 160.798 185.842 -3.922 0.108 -1.112 O12 8JY 34 8JY O14 O7 O 0 1 N N N 148.264 160.322 188.683 -0.064 -1.813 0.094 O14 8JY 35 8JY O15 O8 O 0 1 N N N 148.737 157.891 187.817 -1.761 -3.818 0.190 O15 8JY 36 8JY O16 O9 O 0 1 N N N 149.398 159.892 186.315 -1.931 -2.036 -1.589 O16 8JY 37 8JY O19 O10 O 0 1 N N N 147.025 162.001 191.197 2.322 -0.275 -0.429 O19 8JY 38 8JY O27 O11 O 0 1 N N N 148.402 160.419 191.820 3.586 0.034 1.358 O27 8JY 39 8JY O28 O12 O 0 1 N N N 145.472 163.877 190.091 4.745 -1.841 -0.318 O28 8JY 40 8JY O37 O13 O 0 1 N N N 144.516 162.788 184.842 -4.455 1.556 0.474 O37 8JY 41 8JY P13 P1 P 0 1 N N N 148.464 159.266 187.308 -1.589 -2.258 -0.167 P13 8JY 42 8JY H1 H1 H 0 1 N N N 147.352 164.589 189.553 3.487 -3.427 -0.736 H1 8JY 43 8JY H2 H2 H 0 1 N N N 146.485 163.653 188.288 3.483 -2.108 -1.932 H2 8JY 44 8JY H3 H3 H 0 1 N N N 149.374 161.803 193.678 3.473 2.221 -0.776 H3 8JY 45 8JY H4 H4 H 0 1 N N N 148.583 163.315 193.118 2.013 2.398 0.226 H4 8JY 46 8JY H5 H5 H 0 1 N N N 146.907 161.599 187.832 0.902 -2.093 -1.711 H5 8JY 47 8JY H6 H6 H 0 1 N N N 146.295 160.584 189.182 1.085 -3.412 -0.530 H6 8JY 48 8JY H7 H7 H 0 1 N N N 148.526 162.567 189.843 2.429 -1.862 0.920 H7 8JY 49 8JY H8 H8 H 0 1 N N N 146.588 161.650 194.393 3.420 2.455 2.267 H8 8JY 50 8JY H9 H9 H 0 1 N N N 148.029 161.741 195.462 4.880 2.277 1.265 H9 8JY 51 8JY H10 H10 H 0 1 N N N 147.558 164.424 194.666 4.337 4.396 0.097 H10 8JY 52 8JY H11 H11 H 0 1 N N N 145.921 163.741 194.948 2.877 4.574 1.099 H11 8JY 53 8JY H12 H12 H 0 1 N N N 146.876 164.947 196.940 4.284 4.631 3.140 H12 8JY 54 8JY H13 H13 H 0 1 N N N 146.453 163.232 197.268 5.744 4.453 2.138 H13 8JY 55 8JY H14 H14 H 0 1 N N N 148.579 163.863 198.391 3.741 6.750 1.973 H14 8JY 56 8JY H15 H15 H 0 1 N N N 148.867 162.611 197.135 5.352 6.830 2.725 H15 8JY 57 8JY H16 H16 H 0 1 N N N 149.291 164.326 196.808 5.201 6.572 0.970 H16 8JY 58 8JY H17 H17 H 0 1 N N N 144.597 164.601 191.841 5.928 -2.146 -1.984 H17 8JY 59 8JY H18 H18 H 0 1 N N N 146.390 164.490 191.861 5.933 -3.464 -0.788 H18 8JY 60 8JY H19 H19 H 0 1 N N N 146.361 166.385 190.033 7.149 -0.693 -0.387 H19 8JY 61 8JY H20 H20 H 0 1 N N N 144.631 166.612 190.457 7.153 -2.012 0.809 H20 8JY 62 8JY H21 H21 H 0 1 N N N 147.122 167.353 191.995 8.431 -3.437 -0.767 H21 8JY 63 8JY H22 H22 H 0 1 N N N 144.541 166.481 193.416 9.647 -0.666 -0.367 H22 8JY 64 8JY H23 H23 H 0 1 N N N 145.033 167.561 195.388 10.930 -3.409 -0.747 H23 8JY 65 8JY H24 H24 H 0 1 N N N 146.793 167.645 195.039 10.925 -2.091 -1.943 H24 8JY 66 8JY H25 H25 H 0 1 N N N 145.780 169.903 195.101 12.145 -0.638 -0.347 H25 8JY 67 8JY H26 H26 H 0 1 N N N 146.389 169.518 193.456 12.150 -1.956 0.850 H26 8JY 68 8JY H27 H27 H 0 1 N N N 144.629 169.434 193.804 13.054 -2.133 -0.673 H27 8JY 69 8JY H28 H28 H 0 1 N N N 144.022 162.298 188.032 -2.144 2.208 -1.425 H28 8JY 70 8JY H29 H29 H 0 1 N N N 142.492 164.254 186.208 -4.381 4.003 -0.380 H29 8JY 71 8JY H30 H30 H 0 1 N N N 141.224 164.195 188.766 -1.557 4.636 -1.349 H30 8JY 72 8JY H31 H31 H 0 1 N N N 142.956 166.548 187.881 -3.793 6.430 -0.303 H31 8JY 73 8JY H32 H32 H 0 1 N N N 140.448 166.267 189.550 -0.969 7.063 -1.273 H32 8JY 74 8JY H33 H33 H 0 1 N N N 141.894 167.301 189.805 -2.475 7.455 -2.137 H33 8JY 75 8JY H34 H34 H 0 1 N N N 139.883 168.675 189.310 -1.641 9.415 -0.868 H34 8JY 76 8JY H35 H35 H 0 1 N N N 141.108 168.843 188.007 -3.206 8.858 -0.227 H35 8JY 77 8JY H36 H36 H 0 1 N N N 139.662 167.809 187.753 -1.700 8.466 0.637 H36 8JY 78 8JY H37 H37 H 0 1 N N N 148.943 158.194 185.129 -3.902 -2.962 3.068 H37 8JY 79 8JY H38 H38 H 0 1 N N N 148.488 157.680 182.197 -6.959 -3.473 2.559 H38 8JY 80 8JY H39 H39 H 0 1 N N N 145.008 160.572 180.986 -8.508 -1.762 0.424 H39 8JY 81 8JY H40 H40 H 0 1 N N N 144.165 161.955 183.703 -6.996 0.465 -1.202 H40 8JY 82 8JY H41 H41 H 0 1 N N N 149.531 157.557 187.417 -1.553 -4.037 1.109 H41 8JY 83 8JY H42 H42 H 0 1 N N N 146.207 165.869 193.696 9.652 -1.984 0.829 H42 8JY 84 8JY H43 H43 H 0 1 N N N 145.560 168.227 191.835 8.427 -2.118 -1.963 H43 8JY 85 8JY H45 H45 H 0 1 N N N 141.414 166.155 187.047 -2.287 6.039 0.561 H45 8JY 86 8JY H44 H44 H 0 1 N N N 142.965 164.500 189.088 -3.063 5.027 -2.213 H44 8JY 87 8JY H46 H46 H 0 1 N N N 141.810 162.835 187.074 -2.875 3.611 0.484 H46 8JY 88 8JY H47 H47 H 0 1 N N N 144.731 163.786 187.317 -3.650 2.600 -2.289 H47 8JY 89 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8JY O10 C03 SING N N 1 8JY O09 C02 SING N N 2 8JY C03 C02 DOUB Y N 3 8JY C03 C04 SING Y N 4 8JY C02 C01 SING Y N 5 8JY O11 C04 SING N N 6 8JY C04 C05 DOUB Y N 7 8JY C01 O08 SING N N 8 8JY C01 C06 DOUB Y N 9 8JY C05 C06 SING Y N 10 8JY C05 O12 SING N N 11 8JY O37 C35 DOUB N N 12 8JY C06 O07 SING N N 13 8JY O12 C35 SING N N 14 8JY C35 C36 SING N N 15 8JY O16 P13 DOUB N N 16 8JY O07 P13 SING N N 17 8JY C38 C36 SING N N 18 8JY C38 C39 SING N N 19 8JY P13 O15 SING N N 20 8JY P13 O14 SING N N 21 8JY C40 C39 SING N N 22 8JY C40 C41 SING N N 23 8JY C42 C41 SING N N 24 8JY O14 C17 SING N N 25 8JY C17 C18 SING N N 26 8JY C20 C18 SING N N 27 8JY C20 O28 SING N N 28 8JY C18 O19 SING N N 29 8JY O28 C29 SING N N 30 8JY C30 C29 SING N N 31 8JY C30 C31 SING N N 32 8JY O19 C21 SING N N 33 8JY O27 C21 DOUB N N 34 8JY C31 C32 SING N N 35 8JY C21 C22 SING N N 36 8JY C22 C23 SING N N 37 8JY C32 C33 SING N N 38 8JY C34 C33 SING N N 39 8JY C23 C24 SING N N 40 8JY C24 C25 SING N N 41 8JY C25 C26 SING N N 42 8JY C20 H1 SING N N 43 8JY C20 H2 SING N N 44 8JY C22 H3 SING N N 45 8JY C22 H4 SING N N 46 8JY C17 H5 SING N N 47 8JY C17 H6 SING N N 48 8JY C18 H7 SING N N 49 8JY C23 H8 SING N N 50 8JY C23 H9 SING N N 51 8JY C24 H10 SING N N 52 8JY C24 H11 SING N N 53 8JY C25 H12 SING N N 54 8JY C25 H13 SING N N 55 8JY C26 H14 SING N N 56 8JY C26 H15 SING N N 57 8JY C26 H16 SING N N 58 8JY C29 H17 SING N N 59 8JY C29 H18 SING N N 60 8JY C30 H19 SING N N 61 8JY C30 H20 SING N N 62 8JY C31 H21 SING N N 63 8JY C32 H22 SING N N 64 8JY C33 H23 SING N N 65 8JY C33 H24 SING N N 66 8JY C34 H25 SING N N 67 8JY C34 H26 SING N N 68 8JY C34 H27 SING N N 69 8JY C36 H28 SING N N 70 8JY C38 H29 SING N N 71 8JY C39 H30 SING N N 72 8JY C40 H31 SING N N 73 8JY C41 H32 SING N N 74 8JY C41 H33 SING N N 75 8JY C42 H34 SING N N 76 8JY C42 H35 SING N N 77 8JY C42 H36 SING N N 78 8JY O08 H37 SING N N 79 8JY O09 H38 SING N N 80 8JY O10 H39 SING N N 81 8JY O11 H40 SING N N 82 8JY O15 H41 SING N N 83 8JY C32 H42 SING N N 84 8JY C31 H43 SING N N 85 8JY C40 H45 SING N N 86 8JY C39 H44 SING N N 87 8JY C38 H46 SING N N 88 8JY C36 H47 SING N N 89 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8JY InChI InChI 1.03 "InChI=1S/C28H47O13P/c1-4-7-10-13-16-22(30)40-27-25(33)23(31)24(32)26(34)28(27)41-42(35,36)38-19-20(18-37-17-14-11-8-5-2)39-21(29)15-12-9-6-3/h20,31-34H,4-19H2,1-3H3,(H,35,36)/t20-/m1/s1" 8JY InChIKey InChI 1.03 JZBYPPGRAPDSFI-HXUWFJFHSA-N 8JY SMILES_CANONICAL CACTVS 3.385 "CCCCCCOC[C@H](CO[P](O)(=O)Oc1c(O)c(O)c(O)c(O)c1OC(=O)CCCCCC)OC(=O)CCCCC" 8JY SMILES CACTVS 3.385 "CCCCCCOC[CH](CO[P](O)(=O)Oc1c(O)c(O)c(O)c(O)c1OC(=O)CCCCCC)OC(=O)CCCCC" 8JY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCC(=O)Oc1c(c(c(c(c1OP(=O)(O)OC[C@@H](COCCCCCC)OC(=O)CCCCC)O)O)O)O" 8JY SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCC(=O)Oc1c(c(c(c(c1OP(=O)(O)OCC(COCCCCCC)OC(=O)CCCCC)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id 8JY _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[2-[[(2~{R})-2-hexanoyloxy-3-hexoxy-propoxy]-oxidanyl-phosphoryl]oxy-3,4,5,6-tetrakis(oxidanyl)phenyl] heptanoate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8JY "Create component" 2021-12-20 PDBJ 8JY "Initial release" 2022-02-16 RCSB ##