data_8KC # _chem_comp.id 8KC _chem_comp.name "(2~{S})-2-[[(2~{S})-1-[[(2~{S})-3-(1~{H}-indol-3-yl)-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-hexan-2-yl]amino]-4-phenyl-butanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H33 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-25 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 479.568 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8KC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7Q24 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8KC C21 C1 C 0 1 N N N -45.626 61.262 -19.684 0.123 6.023 2.138 C21 8KC 1 8KC C20 C2 C 0 1 N N N -47.153 61.454 -20.075 0.431 4.579 2.539 C20 8KC 2 8KC C19 C3 C 0 1 N N N -47.468 62.909 -20.485 0.125 3.647 1.364 C19 8KC 3 8KC C18 C4 C 0 1 N N N -48.926 63.102 -20.976 0.433 2.203 1.765 C18 8KC 4 8KC C17 C5 C 0 1 N N S -49.963 62.914 -19.890 0.057 1.264 0.618 C17 8KC 5 8KC C10 C6 C 0 1 Y N N -45.033 63.673 -16.382 3.948 -0.783 -1.008 C10 8KC 6 8KC C11 C7 C 0 1 Y N N -44.442 64.940 -16.461 4.057 0.571 -0.685 C11 8KC 7 8KC C12 C8 C 0 1 Y N N -43.111 65.064 -16.865 4.275 1.489 -1.673 C12 8KC 8 8KC C13 C9 C 0 1 Y N N -42.374 63.929 -17.187 4.388 1.087 -2.997 C13 8KC 9 8KC C14 C10 C 0 1 Y N N -42.963 62.668 -17.108 4.284 -0.244 -3.338 C14 8KC 10 8KC C16 C11 C 0 1 N N N -49.734 63.912 -18.752 0.426 -0.150 0.984 C16 8KC 11 8KC C27 C12 C 0 1 N N N -53.778 63.035 -20.253 -3.164 0.494 -1.084 C27 8KC 12 8KC C28 C13 C 0 1 N N N -54.809 63.681 -19.279 -3.327 -0.788 -0.265 C28 8KC 13 8KC C29 C14 C 0 1 Y N N -56.297 63.728 -19.797 -4.759 -1.252 -0.338 C29 8KC 14 8KC C30 C15 C 0 1 Y N N -57.316 63.282 -18.965 -5.154 -2.118 -1.341 C30 8KC 15 8KC C31 C16 C 0 1 Y N N -58.634 63.322 -19.395 -6.468 -2.544 -1.409 C31 8KC 16 8KC C02 C17 C 0 1 N N N -48.104 65.900 -17.287 1.857 -2.045 3.089 C02 8KC 17 8KC C04 C18 C 0 1 N N S -48.538 64.612 -16.636 2.067 -1.839 1.611 C04 8KC 18 8KC C05 C19 C 0 1 N N N -47.515 64.143 -15.566 3.537 -2.088 1.266 C05 8KC 19 8KC C06 C20 C 0 1 Y N N -46.326 63.237 -16.030 3.723 -2.002 -0.227 C06 8KC 20 8KC C07 C21 C 0 1 Y N N -46.300 61.846 -16.139 3.715 -3.027 -1.094 C07 8KC 21 8KC C09 C22 C 0 1 Y N N -44.304 62.547 -16.701 4.069 -1.197 -2.348 C09 8KC 22 8KC C23 C23 C 0 1 N N S -52.397 62.791 -19.546 -1.711 0.966 -1.010 C23 8KC 23 8KC C24 C24 C 0 1 N N N -52.277 61.366 -19.125 -1.522 2.157 -1.914 C24 8KC 24 8KC C32 C25 C 0 1 Y N N -58.943 63.821 -20.665 -7.386 -2.104 -0.474 C32 8KC 25 8KC C33 C26 C 0 1 Y N N -57.925 64.273 -21.499 -6.991 -1.238 0.529 C33 8KC 26 8KC C34 C27 C 0 1 Y N N -56.607 64.233 -21.070 -5.676 -0.817 0.600 C34 8KC 27 8KC N08 N1 N 0 1 Y N N -45.095 61.474 -16.545 3.916 -2.565 -2.366 N08 8KC 28 8KC N15 N2 N 0 1 N N N -48.729 63.635 -17.701 1.709 -0.464 1.255 N15 8KC 29 8KC N22 N3 N 0 1 N N N -51.303 63.130 -20.479 -1.389 1.345 0.372 N22 8KC 30 8KC O01 O1 O 0 1 N N N -47.515 65.869 -18.400 1.449 -1.137 3.774 O01 8KC 31 8KC O03 O2 O 0 1 N N N -48.347 67.010 -16.731 2.122 -3.238 3.644 O03 8KC 32 8KC O25 O3 O 0 1 N N N -52.072 60.471 -19.976 -1.641 3.275 -1.473 O25 8KC 33 8KC O26 O4 O 0 1 N N N -52.365 61.069 -17.910 -1.221 1.975 -3.210 O26 8KC 34 8KC O35 O5 O 0 1 N N N -50.378 64.910 -18.717 -0.431 -1.007 1.036 O35 8KC 35 8KC H211 H1 H 0 0 N N N -45.449 60.214 -19.400 -0.930 6.109 1.870 H211 8KC 36 8KC H213 H2 H 0 0 N N N -44.992 61.521 -20.545 0.341 6.687 2.974 H213 8KC 37 8KC H212 H3 H 0 0 N N N -45.379 61.918 -18.836 0.739 6.302 1.283 H212 8KC 38 8KC H202 H4 H 0 0 N N N -47.777 61.186 -19.210 1.484 4.493 2.806 H202 8KC 39 8KC H201 H5 H 0 0 N N N -47.390 60.788 -20.918 -0.185 4.300 3.394 H201 8KC 40 8KC H192 H6 H 0 0 N N N -46.784 63.200 -21.296 -0.928 3.734 1.097 H192 8KC 41 8KC H191 H7 H 0 0 N N N -47.303 63.561 -19.615 0.741 3.926 0.509 H191 8KC 42 8KC H182 H8 H 0 0 N N N -49.025 64.121 -21.378 1.497 2.105 1.982 H182 8KC 43 8KC H181 H9 H 0 0 N N N -49.123 62.372 -21.775 -0.144 1.942 2.652 H181 8KC 44 8KC H171 H10 H 0 0 N N N -49.892 61.891 -19.492 0.595 1.558 -0.284 H171 8KC 45 8KC H111 H11 H 0 0 N N N -45.015 65.820 -16.210 3.970 0.891 0.343 H111 8KC 46 8KC H121 H12 H 0 0 N N N -42.654 66.041 -16.927 4.359 2.536 -1.422 H121 8KC 47 8KC H131 H13 H 0 0 N N N -41.344 64.025 -17.499 4.555 1.825 -3.767 H131 8KC 48 8KC H141 H14 H 0 0 N N N -42.391 61.787 -17.359 4.373 -0.547 -4.371 H141 8KC 49 8KC H272 H15 H 0 0 N N N -53.627 63.706 -21.111 -3.430 0.298 -2.123 H272 8KC 50 8KC H271 H16 H 0 0 N N N -54.174 62.072 -20.606 -3.818 1.268 -0.683 H271 8KC 51 8KC H282 H17 H 0 0 N N N -54.795 63.106 -18.341 -2.673 -1.561 -0.667 H282 8KC 52 8KC H281 H18 H 0 0 N N N -54.487 64.714 -19.081 -3.062 -0.591 0.774 H281 8KC 53 8KC H301 H19 H 0 0 N N N -57.081 62.903 -17.981 -4.437 -2.461 -2.072 H301 8KC 54 8KC H311 H20 H 0 0 N N N -59.423 62.967 -18.748 -6.776 -3.220 -2.192 H311 8KC 55 8KC H041 H21 H 0 0 N N N -49.500 64.785 -16.130 1.440 -2.534 1.054 H041 8KC 56 8KC H051 H22 H 0 0 N N N -47.080 65.046 -15.112 4.157 -1.337 1.753 H051 8KC 57 8KC H052 H23 H 0 0 N N N -48.075 63.582 -14.803 3.828 -3.080 1.612 H052 8KC 58 8KC H071 H24 H 0 0 N N N -47.126 61.183 -15.927 3.571 -4.064 -0.826 H071 8KC 59 8KC H231 H25 H 0 0 N N N -52.341 63.440 -18.660 -1.050 0.159 -1.329 H231 8KC 60 8KC H321 H26 H 0 0 N N N -59.970 63.855 -20.998 -8.412 -2.436 -0.527 H321 8KC 61 8KC H331 H27 H 0 0 N N N -58.162 64.655 -22.481 -7.707 -0.898 1.262 H331 8KC 62 8KC H341 H28 H 0 0 N N N -55.818 64.591 -21.715 -5.367 -0.141 1.383 H341 8KC 63 8KC H081 H29 H 0 0 N N N -44.815 60.529 -16.711 3.940 -3.118 -3.162 H081 8KC 64 8KC H151 H30 H 0 0 N N N -48.191 62.793 -17.721 2.394 0.221 1.213 H151 8KC 65 8KC H221 H31 H 0 0 N N N -51.388 64.093 -20.736 -1.900 0.776 1.031 H221 8KC 66 8KC H2 H33 H 0 1 N N N -48.024 67.716 -17.278 1.972 -3.323 4.596 H2 8KC 67 8KC H3 H34 H 0 1 N N N -52.254 60.131 -17.804 -1.110 2.769 -3.750 H3 8KC 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8KC C33 C34 DOUB Y N 1 8KC C33 C32 SING Y N 2 8KC C34 C29 SING Y N 3 8KC C18 C19 SING N N 4 8KC C18 C17 SING N N 5 8KC C32 C31 DOUB Y N 6 8KC C19 C20 SING N N 7 8KC N22 C17 SING N N 8 8KC N22 C23 SING N N 9 8KC C27 C23 SING N N 10 8KC C27 C28 SING N N 11 8KC C20 C21 SING N N 12 8KC O25 C24 DOUB N N 13 8KC C17 C16 SING N N 14 8KC C29 C28 SING N N 15 8KC C29 C30 DOUB Y N 16 8KC C23 C24 SING N N 17 8KC C31 C30 SING Y N 18 8KC C24 O26 SING N N 19 8KC C16 O35 DOUB N N 20 8KC C16 N15 SING N N 21 8KC O01 C02 DOUB N N 22 8KC N15 C04 SING N N 23 8KC C02 O03 SING N N 24 8KC C02 C04 SING N N 25 8KC C13 C14 DOUB Y N 26 8KC C13 C12 SING Y N 27 8KC C14 C09 SING Y N 28 8KC C12 C11 DOUB Y N 29 8KC C09 N08 SING Y N 30 8KC C09 C10 DOUB Y N 31 8KC C04 C05 SING N N 32 8KC N08 C07 SING Y N 33 8KC C11 C10 SING Y N 34 8KC C10 C06 SING Y N 35 8KC C07 C06 DOUB Y N 36 8KC C06 C05 SING N N 37 8KC C21 H211 SING N N 38 8KC C21 H213 SING N N 39 8KC C21 H212 SING N N 40 8KC C20 H202 SING N N 41 8KC C20 H201 SING N N 42 8KC C19 H192 SING N N 43 8KC C19 H191 SING N N 44 8KC C18 H182 SING N N 45 8KC C18 H181 SING N N 46 8KC C17 H171 SING N N 47 8KC C11 H111 SING N N 48 8KC C12 H121 SING N N 49 8KC C13 H131 SING N N 50 8KC C14 H141 SING N N 51 8KC C27 H272 SING N N 52 8KC C27 H271 SING N N 53 8KC C28 H282 SING N N 54 8KC C28 H281 SING N N 55 8KC C30 H301 SING N N 56 8KC C31 H311 SING N N 57 8KC C04 H041 SING N N 58 8KC C05 H051 SING N N 59 8KC C05 H052 SING N N 60 8KC C07 H071 SING N N 61 8KC C23 H231 SING N N 62 8KC C32 H321 SING N N 63 8KC C33 H331 SING N N 64 8KC C34 H341 SING N N 65 8KC N08 H081 SING N N 66 8KC N15 H151 SING N N 67 8KC N22 H221 SING N N 68 8KC O03 H2 SING N N 69 8KC O26 H3 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8KC InChI InChI 1.06 "InChI=1S/C27H33N3O5/c1-2-3-12-22(29-23(26(32)33)15-14-18-9-5-4-6-10-18)25(31)30-24(27(34)35)16-19-17-28-21-13-8-7-11-20(19)21/h4-11,13,17,22-24,28-29H,2-3,12,14-16H2,1H3,(H,30,31)(H,32,33)(H,34,35)/t22-,23-,24-/m0/s1" 8KC InChIKey InChI 1.06 YWBHCYRCVYEOPE-HJOGWXRNSA-N 8KC SMILES_CANONICAL CACTVS 3.385 "CCCC[C@H](N[C@@H](CCc1ccccc1)C(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(O)=O" 8KC SMILES CACTVS 3.385 "CCCC[CH](N[CH](CCc1ccccc1)C(O)=O)C(=O)N[CH](Cc2c[nH]c3ccccc23)C(O)=O" 8KC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCC[C@@H](C(=O)N[C@@H](Cc1c[nH]c2c1cccc2)C(=O)O)N[C@@H](CCc3ccccc3)C(=O)O" 8KC SMILES "OpenEye OEToolkits" 2.0.7 "CCCCC(C(=O)NC(Cc1c[nH]c2c1cccc2)C(=O)O)NC(CCc3ccccc3)C(=O)O" # _pdbx_chem_comp_identifier.comp_id 8KC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-[[(2~{S})-1-[[(2~{S})-3-(1~{H}-indol-3-yl)-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-hexan-2-yl]amino]-4-phenyl-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8KC "Create component" 2021-10-25 PDBE 8KC "Initial release" 2022-02-16 RCSB 8KC "Modify descriptor" 2022-08-22 RCSB #