data_8KD # _chem_comp.id 8KD _chem_comp.name "2-(2-BENZYL-6-HYDROXYADAMANTAN-2-YL)-1-(3-HYDROXYAZETIDIN-1-YL)ETHAN-1-ONE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H29 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-02-10 _chem_comp.pdbx_modified_date 2017-10-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 355.471 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8KD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5PGX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8KD C13 C1 C 0 1 Y N N 42.150 61.040 82.554 -0.272 -3.284 -0.008 C13 8KD 1 8KD C18 C2 C 0 1 Y N N 41.145 61.717 83.224 0.477 -4.290 -0.589 C18 8KD 2 8KD C15 C3 C 0 1 N N N 45.151 61.382 83.533 1.380 1.009 0.522 C15 8KD 3 8KD C19 C4 C 0 1 Y N N 40.789 62.993 82.833 1.858 -4.235 -0.550 C19 8KD 4 8KD C20 C5 C 0 1 Y N N 41.440 63.589 81.772 2.490 -3.173 0.070 C20 8KD 5 8KD C21 C6 C 0 1 Y N N 42.447 62.911 81.103 1.741 -2.167 0.650 C21 8KD 6 8KD C22 C7 C 0 1 N N N 43.999 63.431 84.631 3.727 2.085 0.867 C22 8KD 7 8KD C23 C8 C 0 1 N N N 43.230 62.935 85.901 4.608 1.541 -0.272 C23 8KD 8 8KD C24 C9 C 0 1 N N N 44.176 61.697 85.883 3.327 1.535 -1.126 C24 8KD 9 8KD C11 C10 C 0 1 N N N 43.941 60.902 80.789 -0.456 -1.122 1.239 C11 8KD 10 8KD C12 C11 C 0 1 N N N 45.639 62.125 82.307 0.453 0.415 -0.507 C12 8KD 11 8KD C1 C12 C 0 1 N N N 46.383 60.325 80.599 -1.747 -0.714 -0.861 C1 8KD 12 8KD C2 C13 C 0 1 N N N 45.388 61.480 80.899 -0.821 -0.081 0.179 C2 8KD 13 8KD C3 C14 C 0 1 N N N 45.664 62.495 79.752 -1.533 1.098 0.846 C3 8KD 14 8KD C4 C15 C 0 1 N N N 45.398 61.900 78.359 -2.807 0.602 1.533 C4 8KD 15 8KD C5 C16 C 0 1 N N N 46.333 60.707 78.125 -3.733 -0.031 0.493 C5 8KD 16 8KD C6 C17 C 0 1 N N N 46.125 59.669 79.234 -3.021 -1.210 -0.174 C6 8KD 17 8KD C7 C18 C 0 1 N N N 47.849 60.779 80.616 -2.112 0.327 -1.921 C7 8KD 18 8KD C8 C19 C 0 1 N N N 47.785 61.182 78.162 -4.098 1.010 -0.567 C8 8KD 19 8KD C9 C20 C 0 1 N N N 48.072 61.823 79.518 -2.823 1.506 -1.254 C9 8KD 20 8KD C10 C21 C 0 1 N N N 47.115 63.001 79.747 -1.897 2.139 -0.214 C10 8KD 21 8KD C14 C22 C 0 1 Y N N 42.823 61.632 81.493 0.360 -2.219 0.606 C14 8KD 22 8KD N16 N1 N 0 1 N N N 44.562 62.085 84.525 2.595 1.462 0.153 N16 8KD 23 8KD O17 O1 O 0 1 N N N 45.262 60.170 83.597 1.033 1.080 1.682 O17 8KD 24 8KD O25 O2 O 0 1 N N N 43.485 63.792 87.016 5.598 2.466 -0.726 O25 8KD 25 8KD O26 O3 O 0 1 N N N 48.050 62.086 77.100 -4.763 2.111 0.056 O26 8KD 26 8KD H44 H1 H 0 1 N N N 42.414 60.039 82.860 -1.350 -3.328 -0.038 H44 8KD 27 8KD H45 H2 H 0 1 N N N 40.639 61.246 84.054 -0.016 -5.120 -1.073 H45 8KD 28 8KD H46 H3 H 0 1 N N N 40.005 63.522 83.355 2.443 -5.021 -1.004 H46 8KD 29 8KD H47 H4 H 0 1 N N N 41.164 64.586 81.462 3.568 -3.129 0.100 H47 8KD 30 8KD H48 H5 H 0 1 N N N 42.945 63.383 80.269 2.234 -1.334 1.130 H48 8KD 31 8KD H50 H6 H 0 1 N N N 44.738 64.223 84.822 3.935 1.635 1.837 H50 8KD 32 8KD H49 H7 H 0 1 N N N 43.354 63.726 83.790 3.680 3.173 0.905 H49 8KD 33 8KD H51 H8 H 0 1 N N N 42.175 62.690 85.711 5.012 0.547 -0.078 H51 8KD 34 8KD H52 H9 H 0 1 N N N 43.662 60.727 85.953 3.161 2.462 -1.675 H52 8KD 35 8KD H53 H10 H 0 1 N N N 44.992 61.734 86.619 3.218 0.647 -1.748 H53 8KD 36 8KD H40 H11 H 0 1 N N N 43.685 60.867 79.720 0.124 -0.647 2.030 H40 8KD 37 8KD H41 H12 H 0 1 N N N 43.967 59.879 81.193 -1.368 -1.545 1.662 H41 8KD 38 8KD H42 H13 H 0 1 N N N 46.726 62.256 82.416 0.196 1.175 -1.246 H42 8KD 39 8KD H43 H14 H 0 1 N N N 45.149 63.110 82.306 0.948 -0.420 -1.003 H43 8KD 40 8KD H27 H15 H 0 1 N N N 46.254 59.558 81.376 -1.240 -1.554 -1.336 H27 8KD 41 8KD H28 H16 H 0 1 N N N 44.997 63.358 79.892 -0.873 1.549 1.587 H28 8KD 42 8KD H29 H17 H 0 1 N N N 45.582 62.666 77.592 -2.547 -0.140 2.288 H29 8KD 43 8KD H30 H18 H 0 1 N N N 44.352 61.564 78.298 -3.314 1.442 2.008 H30 8KD 44 8KD H31 H19 H 0 1 N N N 46.116 60.253 77.147 -4.641 -0.385 0.982 H31 8KD 45 8KD H33 H20 H 0 1 N N N 45.092 59.293 79.196 -3.681 -1.661 -0.915 H33 8KD 46 8KD H32 H21 H 0 1 N N N 46.825 58.833 79.090 -2.762 -1.952 0.581 H32 8KD 47 8KD H34 H22 H 0 1 N N N 48.503 59.913 80.437 -1.204 0.681 -2.410 H34 8KD 48 8KD H35 H23 H 0 1 N N N 48.085 61.221 81.595 -2.772 -0.124 -2.661 H35 8KD 49 8KD H36 H24 H 0 1 N N N 48.433 60.299 78.060 -4.758 0.559 -1.308 H36 8KD 50 8KD H37 H25 H 0 1 N N N 49.112 62.179 79.549 -3.083 2.248 -2.009 H37 8KD 51 8KD H39 H26 H 0 1 N N N 47.341 63.473 80.714 -2.404 2.979 0.261 H39 8KD 52 8KD H38 H27 H 0 1 N N N 47.243 63.738 78.940 -0.989 2.493 -0.703 H38 8KD 53 8KD H54 H28 H 0 1 N N N 43.010 63.474 87.775 6.154 2.128 -1.441 H54 8KD 54 8KD H55 H29 H 0 1 N N N 48.956 62.368 77.142 -5.023 2.811 -0.558 H55 8KD 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8KD O26 C8 SING N N 1 8KD C5 C8 SING N N 2 8KD C5 C4 SING N N 3 8KD C5 C6 SING N N 4 8KD C8 C9 SING N N 5 8KD C4 C3 SING N N 6 8KD C6 C1 SING N N 7 8KD C9 C10 SING N N 8 8KD C9 C7 SING N N 9 8KD C10 C3 SING N N 10 8KD C3 C2 SING N N 11 8KD C1 C7 SING N N 12 8KD C1 C2 SING N N 13 8KD C11 C2 SING N N 14 8KD C11 C14 SING N N 15 8KD C2 C12 SING N N 16 8KD C21 C14 DOUB Y N 17 8KD C21 C20 SING Y N 18 8KD C14 C13 SING Y N 19 8KD C20 C19 DOUB Y N 20 8KD C12 C15 SING N N 21 8KD C13 C18 DOUB Y N 22 8KD C19 C18 SING Y N 23 8KD C15 O17 DOUB N N 24 8KD C15 N16 SING N N 25 8KD N16 C22 SING N N 26 8KD N16 C24 SING N N 27 8KD C22 C23 SING N N 28 8KD C24 C23 SING N N 29 8KD C23 O25 SING N N 30 8KD C13 H44 SING N N 31 8KD C18 H45 SING N N 32 8KD C19 H46 SING N N 33 8KD C20 H47 SING N N 34 8KD C21 H48 SING N N 35 8KD C22 H50 SING N N 36 8KD C22 H49 SING N N 37 8KD C23 H51 SING N N 38 8KD C24 H52 SING N N 39 8KD C24 H53 SING N N 40 8KD C11 H40 SING N N 41 8KD C11 H41 SING N N 42 8KD C12 H42 SING N N 43 8KD C12 H43 SING N N 44 8KD C1 H27 SING N N 45 8KD C3 H28 SING N N 46 8KD C4 H29 SING N N 47 8KD C4 H30 SING N N 48 8KD C5 H31 SING N N 49 8KD C6 H33 SING N N 50 8KD C6 H32 SING N N 51 8KD C7 H34 SING N N 52 8KD C7 H35 SING N N 53 8KD C8 H36 SING N N 54 8KD C9 H37 SING N N 55 8KD C10 H39 SING N N 56 8KD C10 H38 SING N N 57 8KD O25 H54 SING N N 58 8KD O26 H55 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8KD SMILES ACDLabs 12.01 "c1ccccc1CC3(CC(=O)N2CC(O)C2)C5CC4C(C(CC3C4)C5)O" 8KD InChI InChI 1.03 "InChI=1S/C22H29NO3/c24-19-12-23(13-19)20(25)11-22(10-14-4-2-1-3-5-14)17-6-15-7-18(22)9-16(8-17)21(15)26/h1-5,15-19,21,24,26H,6-13H2/t15-,16+,17-,18+,21-,22-/m0/s1" 8KD InChIKey InChI 1.03 TUDXSLUOQMCPRD-YORQRNKESA-N 8KD SMILES_CANONICAL CACTVS 3.385 "O[C@H]1CN(C1)C(=O)C[C@@]2(Cc3ccccc3)C4CC5CC2CC(C4)[C@@H]5O" 8KD SMILES CACTVS 3.385 "O[CH]1CN(C1)C(=O)C[C]2(Cc3ccccc3)C4CC5CC2CC(C4)[CH]5O" 8KD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)CC2(C3CC4CC2CC(C3)C4O)CC(=O)N5CC(C5)O" 8KD SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)CC2(C3CC4CC2CC(C3)C4O)CC(=O)N5CC(C5)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 8KD "SYSTEMATIC NAME" ACDLabs 12.01 "2-[(1R,2R,3S,5R,6R,7S)-2-benzyl-6-hydroxytricyclo[3.3.1.1~3,7~]decan-2-yl]-1-(3-hydroxyazetidin-1-yl)ethan-1-one" 8KD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "1-(3-oxidanylazetidin-1-yl)-2-[6-oxidanyl-2-(phenylmethyl)-2-adamantyl]ethanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8KD "Create component" 2017-02-10 RCSB 8KD "Modify name" 2017-04-18 RCSB 8KD "Initial release" 2017-11-01 RCSB #