data_8KI # _chem_comp.id 8KI _chem_comp.name "(1S,5S,6S)-5-methyl-1-[(1S,2S)-2-methyl-1,2,3-tris(oxidanyl)propyl]-2-oxa-7,9-diazabicyclo[4.2.2]decane-8,10-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H20 N2 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-12-20 _chem_comp.pdbx_modified_date 2023-02-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 288.297 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8KI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7V2U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8KI C12 C1 C 0 1 N N N 33.947 42.189 72.391 4.422 -1.051 -0.134 C12 8KI 1 8KI C09 C2 C 0 1 N N S 35.295 41.766 72.968 3.119 -0.454 -0.669 C09 8KI 2 8KI C02 C3 C 0 1 N N S 36.266 42.950 72.854 2.684 0.637 0.263 C02 8KI 3 8KI N01 N1 N 0 1 N N N 36.268 43.532 71.520 2.111 -0.006 1.461 N01 8KI 4 8KI C01 C4 C 0 1 N N N 37.222 43.098 70.517 0.830 -0.431 1.383 C01 8KI 5 8KI O01 O1 O 0 1 N N N 37.203 43.574 69.428 0.388 -1.171 2.236 O01 8KI 6 8KI C10 C5 C 0 1 N N N 35.818 40.468 72.304 2.121 -1.584 -0.861 C10 8KI 7 8KI C08 C6 C 0 1 N N N 36.260 40.634 70.831 0.917 -1.091 -1.667 C08 8KI 8 8KI O04 O2 O 0 1 N N N 37.691 40.710 70.703 -0.234 -0.919 -0.792 O04 8KI 9 8KI C04 C7 C 0 1 N N S 38.251 42.015 70.877 -0.037 0.002 0.263 C04 8KI 10 8KI N02 N2 N 0 1 N N N 38.631 42.126 72.270 0.365 1.302 -0.302 N02 8KI 11 8KI C03 C8 C 0 1 N N N 37.675 42.543 73.262 1.689 1.578 -0.335 C03 8KI 12 8KI O02 O3 O 0 1 N N N 37.986 42.586 74.394 2.074 2.603 -0.857 O02 8KI 13 8KI C05 C9 C 0 1 N N S 39.520 42.193 70.007 -1.421 0.245 0.870 C05 8KI 14 8KI O05 O4 O 0 1 N N N 39.857 43.558 69.957 -1.568 1.633 1.179 O05 8KI 15 8KI C06 C10 C 0 1 N N S 40.742 41.376 70.489 -2.498 -0.170 -0.134 C06 8KI 16 8KI C11 C11 C 0 1 N N N 41.880 41.677 69.531 -2.320 0.623 -1.431 C11 8KI 17 8KI O06 O5 O 0 1 N N N 41.127 41.745 71.797 -2.379 -1.567 -0.410 O06 8KI 18 8KI C07 C12 C 0 1 N N N 40.484 39.859 70.454 -3.881 0.117 0.453 C07 8KI 19 8KI O03 O6 O 0 1 N N N 41.717 39.179 70.423 -4.887 -0.270 -0.484 O03 8KI 20 8KI H1 H1 H 0 1 N N N 33.609 43.112 72.886 4.241 -1.502 0.842 H1 8KI 21 8KI H2 H2 H 0 1 N N N 34.051 42.369 71.311 4.784 -1.813 -0.824 H2 8KI 22 8KI H3 H3 H 0 1 N N N 33.209 41.391 72.560 5.170 -0.264 -0.037 H3 8KI 23 8KI H4 H4 H 0 1 N N N 35.151 41.555 74.038 3.324 -0.010 -1.643 H4 8KI 24 8KI H5 H5 H 0 1 N N N 35.927 43.719 73.564 3.561 1.204 0.573 H5 8KI 25 8KI H6 H6 H 0 1 N N N 35.602 44.242 71.291 2.632 -0.119 2.271 H6 8KI 26 8KI H7 H7 H 0 1 N N N 35.015 39.717 72.339 2.601 -2.405 -1.394 H7 8KI 27 8KI H8 H8 H 0 1 N N N 36.682 40.110 72.883 1.781 -1.936 0.113 H8 8KI 28 8KI H9 H9 H 0 1 N N N 35.818 41.558 70.430 1.161 -0.137 -2.134 H9 8KI 29 8KI H10 H10 H 0 1 N N N 35.897 39.772 70.252 0.676 -1.821 -2.440 H10 8KI 30 8KI H11 H11 H 0 1 N N N 39.568 41.911 72.546 -0.292 1.934 -0.636 H11 8KI 31 8KI H12 H12 H 0 1 N N N 39.273 41.846 68.993 -1.527 -0.344 1.781 H12 8KI 32 8KI H13 H13 H 0 1 N N N 39.081 44.069 69.759 -1.609 2.207 0.402 H13 8KI 33 8KI H14 H14 H 0 1 N N N 42.775 41.115 69.836 -1.302 0.493 -1.799 H14 8KI 34 8KI H15 H15 H 0 1 N N N 41.590 41.380 68.512 -3.025 0.260 -2.178 H15 8KI 35 8KI H16 H16 H 0 1 N N N 42.100 42.755 69.550 -2.505 1.680 -1.239 H16 8KI 36 8KI H17 H17 H 0 1 N N N 40.418 41.558 72.401 -2.481 -2.132 0.368 H17 8KI 37 8KI H18 H18 H 0 1 N N N 39.902 39.606 69.556 -4.008 -0.447 1.377 H18 8KI 38 8KI H19 H19 H 0 1 N N N 39.922 39.561 71.351 -3.972 1.183 0.664 H19 8KI 39 8KI H20 H20 H 0 1 N N N 41.562 38.242 70.401 -5.791 -0.116 -0.178 H20 8KI 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8KI O01 C01 DOUB N N 1 8KI C11 C06 SING N N 2 8KI O05 C05 SING N N 3 8KI C05 C06 SING N N 4 8KI C05 C04 SING N N 5 8KI O03 C07 SING N N 6 8KI C07 C06 SING N N 7 8KI C06 O06 SING N N 8 8KI C01 C04 SING N N 9 8KI C01 N01 SING N N 10 8KI O04 C08 SING N N 11 8KI O04 C04 SING N N 12 8KI C08 C10 SING N N 13 8KI C04 N02 SING N N 14 8KI N01 C02 SING N N 15 8KI N02 C03 SING N N 16 8KI C10 C09 SING N N 17 8KI C12 C09 SING N N 18 8KI C02 C09 SING N N 19 8KI C02 C03 SING N N 20 8KI C03 O02 DOUB N N 21 8KI C12 H1 SING N N 22 8KI C12 H2 SING N N 23 8KI C12 H3 SING N N 24 8KI C09 H4 SING N N 25 8KI C02 H5 SING N N 26 8KI N01 H6 SING N N 27 8KI C10 H7 SING N N 28 8KI C10 H8 SING N N 29 8KI C08 H9 SING N N 30 8KI C08 H10 SING N N 31 8KI N02 H11 SING N N 32 8KI C05 H12 SING N N 33 8KI O05 H13 SING N N 34 8KI C11 H14 SING N N 35 8KI C11 H15 SING N N 36 8KI C11 H16 SING N N 37 8KI O06 H17 SING N N 38 8KI C07 H18 SING N N 39 8KI C07 H19 SING N N 40 8KI O03 H20 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8KI InChI InChI 1.03 "InChI=1S/C12H20N2O6/c1-6-3-4-20-12(9(17)11(2,19)5-15)10(18)13-7(6)8(16)14-12/h6-7,9,15,17,19H,3-5H2,1-2H3,(H,13,18)(H,14,16)/t6-,7-,9-,11-,12-/m0/s1" 8KI InChIKey InChI 1.03 BXNDMHSEWSMSNI-USYUNJQESA-N 8KI SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CCO[C@@]2(NC(=O)[C@H]1NC2=O)[C@@H](O)[C@@](C)(O)CO" 8KI SMILES CACTVS 3.385 "C[CH]1CCO[C]2(NC(=O)[CH]1NC2=O)[CH](O)[C](C)(O)CO" 8KI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1CCO[C@]2(C(=O)N[C@@H]1C(=O)N2)[C@H]([C@](C)(CO)O)O" 8KI SMILES "OpenEye OEToolkits" 2.0.7 "CC1CCOC2(C(=O)NC1C(=O)N2)C(C(C)(CO)O)O" # _pdbx_chem_comp_identifier.comp_id 8KI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{S},5~{S},6~{S})-5-methyl-1-[(1~{S},2~{S})-2-methyl-1,2,3-tris(oxidanyl)propyl]-2-oxa-7,9-diazabicyclo[4.2.2]decane-8,10-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8KI "Create component" 2021-12-20 PDBJ 8KI "Initial release" 2023-02-15 RCSB #