data_8KL # _chem_comp.id 8KL _chem_comp.name ;9-O-3'-quinolinium propylberberine ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H28 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 2017-07-26 _chem_comp.pdbx_modified_date 2018-01-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 492.565 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8KL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5Y1B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8KL CAB C1 C 0 1 Y N N 35.839 1.371 13.326 -3.096 0.240 0.162 CAB 8KL 1 8KL CAC C2 C 0 1 Y N N 35.913 -1.250 12.419 -0.795 1.723 0.309 CAC 8KL 2 8KL CAD C3 C 0 1 Y N N 35.796 2.686 13.770 -4.336 -0.577 0.121 CAD 8KL 3 8KL CAE C4 C 0 1 Y N N 34.727 -0.670 12.839 -0.796 0.327 0.440 CAE 8KL 4 8KL CAG C5 C 0 1 Y N N 37.041 0.812 12.908 -3.192 1.608 -0.019 CAG 8KL 5 8KL CAH C6 C 0 1 Y N N 34.583 3.340 13.905 -4.295 -1.891 0.581 CAH 8KL 6 8KL CAI C7 C 0 1 Y N N 36.956 3.384 14.075 -5.517 -0.015 -0.378 CAI 8KL 7 8KL CAJ C8 C 0 1 Y N N 35.973 -2.565 11.967 0.385 2.480 0.417 CAJ 8KL 8 8KL CAK C9 C 0 1 Y N N 37.078 -0.499 12.449 -2.025 2.386 0.053 CAK 8KL 9 8KL CAL C10 C 0 1 Y N N 36.907 4.652 14.491 -6.641 -0.825 -0.403 CAL 8KL 10 8KL CAM C11 C 0 1 Y N N 35.740 5.285 14.620 -6.591 -2.154 0.052 CAM 8KL 11 8KL CAN C12 C 0 1 Y N N 30.298 -2.708 15.399 5.682 -1.606 -0.362 CAN 8KL 12 8KL CAO C13 C 0 1 Y N N 34.597 4.657 14.338 -5.417 -2.704 0.550 CAO 8KL 13 8KL CAP C14 C 0 1 N N N 33.430 1.214 13.751 -1.823 -1.825 0.383 CAP 8KL 14 8KL CAS C15 C 0 1 Y N N 37.171 -3.130 11.537 0.326 3.852 0.254 CAS 8KL 15 8KL CAT C16 C 0 1 N N N 37.339 6.777 14.845 -8.532 -1.840 -0.994 CAT 8KL 16 8KL CAU C17 C 0 1 N N N 33.370 2.727 13.589 -3.001 -2.424 1.144 CAU 8KL 17 8KL CAV C18 C 0 1 Y N N 38.278 -1.059 12.026 -2.045 3.778 -0.113 CAV 8KL 18 8KL CAW C19 C 0 1 Y N N 38.335 -2.372 11.570 -0.886 4.489 -0.012 CAW 8KL 19 8KL CAX C20 C 0 1 Y N N 28.986 -3.048 15.715 6.872 -2.227 0.091 CAX 8KL 20 8KL CAY C21 C 0 1 N N N 32.244 -2.784 13.903 4.456 0.320 -1.163 CAY 8KL 21 8KL CAZ C22 C 0 1 Y N N 30.099 -3.921 13.361 6.788 0.405 -0.611 CAZ 8KL 22 8KL CBC C23 C 0 1 N N N 32.933 -3.999 13.271 3.632 0.781 0.041 CBC 8KL 23 8KL CBD C24 C 0 1 Y N N 28.789 -4.267 13.664 7.993 -0.146 -0.184 CBD 8KL 24 8KL CBE C25 C 0 1 Y N N 31.034 -1.927 16.282 4.503 -2.368 -0.449 CBE 8KL 25 8KL CBF C26 C 0 1 N N N 34.457 -3.846 13.203 2.340 1.440 -0.447 CBF 8KL 26 8KL CBG C27 C 0 1 Y N N 28.230 -3.825 14.852 8.051 -1.463 0.177 CBG 8KL 27 8KL CBH C28 C 0 1 Y N N 28.407 -2.617 16.900 6.854 -3.586 0.446 CBH 8KL 28 8KL CBI C29 C 0 1 N N N 38.191 -4.635 10.135 1.340 6.002 0.178 CBI 8KL 29 8KL CBJ C30 C 0 1 Y N N 30.454 -1.495 17.469 4.522 -3.682 -0.098 CBJ 8KL 30 8KL CBK C31 C 0 1 Y N N 29.143 -1.838 17.780 5.694 -4.291 0.349 CBK 8KL 31 8KL NAA N1 N 1 1 Y N N 34.710 0.647 13.287 -1.913 -0.361 0.339 NAA 8KL 32 8KL NAF N2 N 1 1 Y N N 30.846 -3.132 14.248 5.693 -0.311 -0.695 NAF 8KL 33 8KL OAQ O1 O 0 1 N N N 37.936 5.465 14.843 -7.898 -0.555 -0.822 OAQ 8KL 34 8KL OAR O2 O 0 1 N N N 35.929 6.556 15.066 -7.817 -2.707 -0.090 OAR 8KL 35 8KL OBA O3 O 0 1 N N N 34.829 -3.309 11.927 1.571 1.870 0.678 OBA 8KL 36 8KL OBB O4 O 0 1 N N N 37.147 -4.420 11.097 1.465 4.589 0.355 OBB 8KL 37 8KL H1 H1 H 0 1 N N N 33.812 -1.243 12.819 0.133 -0.190 0.628 H1 8KL 38 8KL H2 H2 H 0 1 N N N 37.948 1.398 12.940 -4.148 2.070 -0.212 H2 8KL 39 8KL H3 H3 H 0 1 N N N 37.913 2.894 13.974 -5.551 1.006 -0.728 H3 8KL 40 8KL H4 H4 H 0 1 N N N 33.662 5.186 14.449 -5.379 -3.726 0.898 H4 8KL 41 8KL H5 H5 H 0 1 N N N 32.613 0.764 13.168 -0.895 -2.111 0.878 H5 8KL 42 8KL H6 H6 H 0 1 N N N 33.300 0.968 14.815 -1.820 -2.213 -0.635 H6 8KL 43 8KL H7 H7 H 0 1 N N N 37.763 7.392 15.652 -9.585 -1.786 -0.719 H7 8KL 44 8KL H8 H8 H 0 1 N N N 37.504 7.276 13.879 -8.424 -2.187 -2.021 H8 8KL 45 8KL H9 H9 H 0 1 N N N 33.116 2.962 12.545 -2.927 -2.157 2.198 H9 8KL 46 8KL H10 H10 H 0 1 N N N 32.589 3.124 14.254 -2.983 -3.510 1.044 H10 8KL 47 8KL H11 H11 H 0 1 N N N 39.180 -0.466 12.052 -2.975 4.286 -0.322 H11 8KL 48 8KL H12 H12 H 0 1 N N N 39.273 -2.797 11.245 -0.907 5.561 -0.140 H12 8KL 49 8KL H13 H13 H 0 1 N N N 32.784 -2.490 14.815 3.879 -0.399 -1.745 H13 8KL 50 8KL H14 H14 H 0 1 N N N 32.248 -1.948 13.188 4.700 1.180 -1.786 H14 8KL 51 8KL H15 H15 H 0 1 N N N 30.545 -4.261 12.438 6.757 1.447 -0.893 H15 8KL 52 8KL H16 H16 H 0 1 N N N 32.547 -4.131 12.250 3.388 -0.079 0.665 H16 8KL 53 8KL H17 H17 H 0 1 N N N 32.695 -4.890 13.871 4.209 1.499 0.623 H17 8KL 54 8KL H18 H18 H 0 1 N N N 28.212 -4.874 12.981 8.878 0.469 -0.125 H18 8KL 55 8KL H19 H19 H 0 1 N N N 32.053 -1.657 16.047 3.587 -1.911 -0.792 H19 8KL 56 8KL H20 H20 H 0 1 N N N 34.930 -4.830 13.338 2.585 2.300 -1.070 H20 8KL 57 8KL H21 H21 H 0 1 N N N 34.793 -3.165 13.999 1.763 0.721 -1.029 H21 8KL 58 8KL H22 H22 H 0 1 N N N 27.212 -4.084 15.104 8.975 -1.904 0.520 H22 8KL 59 8KL H23 H23 H 0 1 N N N 27.388 -2.887 17.136 7.756 -4.069 0.792 H23 8KL 60 8KL H24 H24 H 0 1 N N N 38.161 -5.678 9.788 2.319 6.469 0.283 H24 8KL 61 8KL H25 H25 H 0 1 N N N 38.045 -3.960 9.279 0.944 6.210 -0.816 H25 8KL 62 8KL H26 H26 H 0 1 N N N 39.166 -4.431 10.601 0.662 6.405 0.930 H26 8KL 63 8KL H27 H27 H 0 1 N N N 31.026 -0.888 18.155 3.614 -4.263 -0.166 H27 8KL 64 8KL H28 H28 H 0 1 N N N 28.699 -1.499 18.704 5.681 -5.336 0.621 H28 8KL 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8KL CBI OBB SING N N 1 8KL OBB CAS SING N N 2 8KL CAS CAW DOUB Y N 3 8KL CAS CAJ SING Y N 4 8KL CAW CAV SING Y N 5 8KL OBA CAJ SING N N 6 8KL OBA CBF SING N N 7 8KL CAJ CAC DOUB Y N 8 8KL CAV CAK DOUB Y N 9 8KL CAC CAK SING Y N 10 8KL CAC CAE SING Y N 11 8KL CAK CAG SING Y N 12 8KL CAE NAA DOUB Y N 13 8KL CAG CAB DOUB Y N 14 8KL CBF CBC SING N N 15 8KL CBC CAY SING N N 16 8KL NAA CAB SING Y N 17 8KL NAA CAP SING N N 18 8KL CAB CAD SING N N 19 8KL CAZ CBD DOUB Y N 20 8KL CAZ NAF SING Y N 21 8KL CAU CAP SING N N 22 8KL CAU CAH SING N N 23 8KL CBD CBG SING Y N 24 8KL CAD CAH DOUB Y N 25 8KL CAD CAI SING Y N 26 8KL CAY NAF SING N N 27 8KL CAH CAO SING Y N 28 8KL CAI CAL DOUB Y N 29 8KL NAF CAN DOUB Y N 30 8KL CAO CAM DOUB Y N 31 8KL CAL CAM SING Y N 32 8KL CAL OAQ SING N N 33 8KL CAM OAR SING N N 34 8KL OAQ CAT SING N N 35 8KL CAT OAR SING N N 36 8KL CBG CAX DOUB Y N 37 8KL CAN CAX SING Y N 38 8KL CAN CBE SING Y N 39 8KL CAX CBH SING Y N 40 8KL CBE CBJ DOUB Y N 41 8KL CBH CBK DOUB Y N 42 8KL CBJ CBK SING Y N 43 8KL CAE H1 SING N N 44 8KL CAG H2 SING N N 45 8KL CAI H3 SING N N 46 8KL CAO H4 SING N N 47 8KL CAP H5 SING N N 48 8KL CAP H6 SING N N 49 8KL CAT H7 SING N N 50 8KL CAT H8 SING N N 51 8KL CAU H9 SING N N 52 8KL CAU H10 SING N N 53 8KL CAV H11 SING N N 54 8KL CAW H12 SING N N 55 8KL CAY H13 SING N N 56 8KL CAY H14 SING N N 57 8KL CAZ H15 SING N N 58 8KL CBC H16 SING N N 59 8KL CBC H17 SING N N 60 8KL CBD H18 SING N N 61 8KL CBE H19 SING N N 62 8KL CBF H20 SING N N 63 8KL CBF H21 SING N N 64 8KL CBG H22 SING N N 65 8KL CBH H23 SING N N 66 8KL CBI H24 SING N N 67 8KL CBI H25 SING N N 68 8KL CBI H26 SING N N 69 8KL CBJ H27 SING N N 70 8KL CBK H28 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8KL InChI InChI 1.03 "InChI=1S/C31H28N2O4/c1-34-28-10-9-22-16-27-24-18-30-29(36-20-37-30)17-23(24)11-14-33(27)19-25(22)31(28)35-15-5-13-32-12-4-7-21-6-2-3-8-26(21)32/h2-4,6-10,12,16-19H,5,11,13-15,20H2,1H3/q+2" 8KL InChIKey InChI 1.03 NCXCLFQYKFLSTH-UHFFFAOYSA-N 8KL SMILES_CANONICAL CACTVS 3.385 "COc1ccc2cc3c4cc5OCOc5cc4CC[n+]3cc2c1OCCC[n+]6cccc7ccccc67" 8KL SMILES CACTVS 3.385 "COc1ccc2cc3c4cc5OCOc5cc4CC[n+]3cc2c1OCCC[n+]6cccc7ccccc67" 8KL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "COc1ccc2cc-3[n+](cc2c1OCCC[n+]4cccc5c4cccc5)CCc6c3cc7c(c6)OCO7" 8KL SMILES "OpenEye OEToolkits" 2.0.6 "COc1ccc2cc-3[n+](cc2c1OCCC[n+]4cccc5c4cccc5)CCc6c3cc7c(c6)OCO7" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8KL "Create component" 2017-07-26 PDBJ 8KL "Initial release" 2018-01-24 RCSB #