data_8L2 # _chem_comp.id 8L2 _chem_comp.name "(2~{S})-3-azanyl-2-[[(2~{S})-4-methyl-2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]pentanoyl]amino]propanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H29 N4 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-02-09 _chem_comp.pdbx_modified_date 2017-06-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 444.419 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8L2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5N3Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8L2 C3 C1 C 0 1 N N N 12.145 39.996 -6.846 1.455 -0.744 1.923 C3 8L2 1 8L2 C8 C2 C 0 1 N N N 13.800 40.358 -11.396 5.582 1.174 0.336 C8 8L2 2 8L2 C9 C3 C 0 1 Y N N 15.299 40.493 -11.544 6.923 0.791 -0.237 C9 8L2 3 8L2 C10 C4 C 0 1 Y N N 16.003 39.868 -12.587 7.990 0.547 0.607 C10 8L2 4 8L2 C11 C5 C 0 1 Y N N 17.380 39.994 -12.709 9.220 0.196 0.081 C11 8L2 5 8L2 C12 C6 C 0 1 Y N N 18.061 40.751 -11.765 9.382 0.088 -1.287 C12 8L2 6 8L2 C13 C7 C 0 1 Y N N 17.381 41.374 -10.701 8.314 0.331 -2.131 C13 8L2 7 8L2 C14 C8 C 0 1 Y N N 16.011 41.220 -10.594 7.083 0.678 -1.605 C14 8L2 8 8L2 C16 C9 C 0 1 N N S 10.063 38.611 -3.668 -2.338 -0.608 0.172 C16 8L2 9 8L2 C19 C10 C 0 1 N N N 9.630 38.506 0.199 -3.064 -2.027 -2.373 C19 8L2 10 8L2 C20 C11 C 0 1 N N N 9.223 36.566 -1.402 -4.519 -3.543 -1.021 C20 8L2 11 8L2 C21 C12 C 0 1 N N N 8.837 39.499 -3.914 -3.460 0.348 0.483 C21 8L2 12 8L2 N23 N1 N 0 1 N N N 9.129 40.813 -4.162 -4.375 0.643 -0.461 N23 8L2 13 8L2 C24 C13 C 0 1 N N S 8.147 41.862 -4.384 -5.402 1.653 -0.196 C24 8L2 14 8L2 N26 N2 N 0 1 N N N 7.591 42.255 -2.068 -4.739 2.764 -2.275 N26 8L2 15 8L2 P2 P1 P 0 1 N N N 11.441 38.554 -6.007 0.229 -0.727 0.574 P2 8L2 16 8L2 O1 O1 O 0 1 N N N 12.421 37.411 -6.110 0.290 -2.124 -0.224 O1 8L2 17 8L2 N4 N3 N 0 1 N N N 12.795 39.596 -8.078 2.796 -0.928 1.362 N4 8L2 18 8L2 C5 C14 C 0 1 N N N 12.819 40.336 -9.198 3.571 0.144 1.104 C5 8L2 19 8L2 O6 O2 O 0 1 N N N 12.374 41.446 -9.312 3.158 1.262 1.337 O6 8L2 20 8L2 O7 O3 O 0 1 N N N 13.443 39.644 -10.195 4.803 -0.025 0.588 O7 8L2 21 8L2 N15 N4 N 0 1 N N N 11.237 39.112 -4.412 -1.311 -0.516 1.219 N15 8L2 22 8L2 C17 C15 C 0 1 N N N 10.420 38.629 -2.193 -2.885 -2.036 0.119 C17 8L2 23 8L2 C18 C16 C 0 1 N N N 9.351 38.081 -1.245 -3.845 -2.171 -1.065 C18 8L2 24 8L2 O22 O4 O 0 1 N N N 7.689 39.084 -3.836 -3.539 0.853 1.583 O22 8L2 25 8L2 O27 O5 O 0 1 N N N 10.092 38.196 -6.563 0.532 0.385 -0.354 O27 8L2 26 8L2 C28 C17 C 0 1 N N N 8.581 42.657 -5.604 -6.562 1.013 0.523 C28 8L2 27 8L2 O29 O6 O 0 1 N N N 9.691 42.600 -6.062 -7.627 1.753 0.870 O29 8L2 28 8L2 O30 O7 O 0 1 N N N 7.616 43.411 -6.122 -6.533 -0.166 0.786 O30 8L2 29 8L2 C25 C18 C 0 1 N N N 8.082 42.886 -3.262 -5.888 2.247 -1.520 C25 8L2 30 8L2 H1 H1 H 0 1 N N N 12.883 40.475 -6.186 1.414 0.201 2.464 H1 8L2 31 8L2 H2 H2 H 0 1 N N N 11.341 40.710 -7.076 1.232 -1.564 2.606 H2 8L2 32 8L2 H3 H3 H 0 1 N N N 13.354 41.363 -11.359 5.728 1.716 1.270 H3 8L2 33 8L2 H4 H4 H 0 1 N N N 13.404 39.813 -12.265 5.052 1.809 -0.374 H4 8L2 34 8L2 H5 H5 H 0 1 N N N 15.461 39.276 -13.310 7.864 0.631 1.676 H5 8L2 35 8L2 H6 H6 H 0 1 N N N 17.909 39.514 -13.519 10.054 0.006 0.740 H6 8L2 36 8L2 H7 H7 H 0 1 N N N 19.132 40.864 -11.848 10.343 -0.185 -1.698 H7 8L2 37 8L2 H8 H8 H 0 1 N N N 17.923 41.965 -9.977 8.440 0.247 -3.200 H8 8L2 38 8L2 H9 H9 H 0 1 N N N 15.487 41.669 -9.763 6.248 0.864 -2.264 H9 8L2 39 8L2 H10 H10 H 0 1 N N N 9.833 37.581 -3.977 -1.898 -0.352 -0.791 H10 8L2 40 8L2 H11 H11 H 0 1 N N N 8.849 38.100 0.859 -3.729 -2.217 -3.216 H11 8L2 41 8L2 H12 H12 H 0 1 N N N 10.611 38.119 0.512 -2.662 -1.017 -2.448 H12 8L2 42 8L2 H13 H13 H 0 1 N N N 9.631 39.604 0.264 -2.245 -2.746 -2.388 H13 8L2 43 8L2 H14 H14 H 0 1 N N N 8.451 36.189 -0.714 -5.075 -3.646 -0.089 H14 8L2 44 8L2 H15 H15 H 0 1 N N N 8.939 36.328 -2.438 -5.203 -3.639 -1.865 H15 8L2 45 8L2 H16 H16 H 0 1 N N N 10.187 36.090 -1.167 -3.760 -4.323 -1.079 H16 8L2 46 8L2 H17 H17 H 0 1 N N N 10.094 41.072 -4.193 -4.353 0.186 -1.317 H17 8L2 47 8L2 H18 H18 H 0 1 N N N 7.149 41.432 -4.555 -4.982 2.444 0.425 H18 8L2 48 8L2 H19 H19 H 0 1 N N N 7.548 42.927 -1.329 -4.046 2.045 -2.418 H19 8L2 49 8L2 H20 H20 H 0 1 N N N 6.677 41.887 -2.238 -5.034 3.162 -3.154 H20 8L2 50 8L2 H22 H22 H 0 1 N N N 11.996 36.664 -6.514 0.029 -2.891 0.304 H22 8L2 51 8L2 H23 H23 H 0 1 N N N 13.257 38.709 -8.095 3.126 -1.821 1.176 H23 8L2 52 8L2 H24 H24 H 0 1 N N N 12.053 38.853 -3.896 -1.488 -1.180 1.958 H24 8L2 53 8L2 H25 H25 H 0 1 N N N 11.331 38.028 -2.058 -2.059 -2.737 -0.001 H25 8L2 54 8L2 H26 H26 H 0 1 N N N 10.623 39.672 -1.907 -3.416 -2.256 1.045 H26 8L2 55 8L2 H27 H27 H 0 1 N N N 8.389 38.526 -1.540 -4.604 -1.391 -1.008 H27 8L2 56 8L2 H28 H28 H 0 1 N N N 9.749 43.164 -6.824 -8.346 1.298 1.330 H28 8L2 57 8L2 H29 H29 H 0 1 N N N 9.088 43.291 -3.076 -6.388 1.474 -2.103 H29 8L2 58 8L2 H30 H30 H 0 1 N N N 7.405 43.704 -3.550 -6.586 3.059 -1.319 H30 8L2 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8L2 C11 C10 DOUB Y N 1 8L2 C11 C12 SING Y N 2 8L2 C10 C9 SING Y N 3 8L2 C12 C13 DOUB Y N 4 8L2 C9 C8 SING N N 5 8L2 C9 C14 DOUB Y N 6 8L2 C8 O7 SING N N 7 8L2 C13 C14 SING Y N 8 8L2 O7 C5 SING N N 9 8L2 O6 C5 DOUB N N 10 8L2 C5 N4 SING N N 11 8L2 N4 C3 SING N N 12 8L2 C3 P2 SING N N 13 8L2 O27 P2 DOUB N N 14 8L2 O30 C28 DOUB N N 15 8L2 O1 P2 SING N N 16 8L2 O29 C28 SING N N 17 8L2 P2 N15 SING N N 18 8L2 C28 C24 SING N N 19 8L2 N15 C16 SING N N 20 8L2 C24 N23 SING N N 21 8L2 C24 C25 SING N N 22 8L2 N23 C21 SING N N 23 8L2 C21 O22 DOUB N N 24 8L2 C21 C16 SING N N 25 8L2 C16 C17 SING N N 26 8L2 C25 N26 SING N N 27 8L2 C17 C18 SING N N 28 8L2 C20 C18 SING N N 29 8L2 C18 C19 SING N N 30 8L2 C3 H1 SING N N 31 8L2 C3 H2 SING N N 32 8L2 C8 H3 SING N N 33 8L2 C8 H4 SING N N 34 8L2 C10 H5 SING N N 35 8L2 C11 H6 SING N N 36 8L2 C12 H7 SING N N 37 8L2 C13 H8 SING N N 38 8L2 C14 H9 SING N N 39 8L2 C16 H10 SING N N 40 8L2 C19 H11 SING N N 41 8L2 C19 H12 SING N N 42 8L2 C19 H13 SING N N 43 8L2 C20 H14 SING N N 44 8L2 C20 H15 SING N N 45 8L2 C20 H16 SING N N 46 8L2 N23 H17 SING N N 47 8L2 C24 H18 SING N N 48 8L2 N26 H19 SING N N 49 8L2 N26 H20 SING N N 50 8L2 O1 H22 SING N N 51 8L2 N4 H23 SING N N 52 8L2 N15 H24 SING N N 53 8L2 C17 H25 SING N N 54 8L2 C17 H26 SING N N 55 8L2 C18 H27 SING N N 56 8L2 O29 H28 SING N N 57 8L2 C25 H29 SING N N 58 8L2 C25 H30 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8L2 InChI InChI 1.03 "InChI=1S/C18H29N4O7P/c1-12(2)8-14(16(23)21-15(9-19)17(24)25)22-30(27,28)11-20-18(26)29-10-13-6-4-3-5-7-13/h3-7,12,14-15H,8-11,19H2,1-2H3,(H,20,26)(H,21,23)(H,24,25)(H2,22,27,28)/t14-,15-/m0/s1" 8L2 InChIKey InChI 1.03 XMQOUWSDXLWVTQ-GJZGRUSLSA-N 8L2 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)N[C@@H](CN)C(O)=O" 8L2 SMILES CACTVS 3.385 "CC(C)C[CH](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)N[CH](CN)C(O)=O" 8L2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(C)C[C@@H](C(=O)N[C@@H](CN)C(=O)O)NP(=O)(CNC(=O)OCc1ccccc1)O" 8L2 SMILES "OpenEye OEToolkits" 2.0.6 "CC(C)CC(C(=O)NC(CN)C(=O)O)NP(=O)(CNC(=O)OCc1ccccc1)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 8L2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-3-azanyl-2-[[(2~{S})-4-methyl-2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]pentanoyl]amino]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8L2 "Create component" 2017-02-09 EBI 8L2 "Initial release" 2017-06-21 RCSB #