data_8N1 # _chem_comp.id 8N1 _chem_comp.name "N-{2-chloro-5-[({2-[3-(prop-1-en-2-yl)phenyl]propan-2-yl}carbamoyl)amino]phenyl}-beta-D-xylofuranosylamine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H30 Cl N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-02-20 _chem_comp.pdbx_modified_date 2017-03-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 475.965 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8N1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5UUW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8N1 C1 C1 C 0 1 Y N N -24.823 17.484 -3.066 5.098 -0.454 0.216 C1 8N1 1 8N1 C2 C2 C 0 1 Y N N -25.207 18.597 -2.332 4.757 -1.796 0.224 C2 8N1 2 8N1 C3 C3 C 0 1 Y N N -24.253 19.529 -1.943 5.733 -2.764 0.068 C3 8N1 3 8N1 C4 C4 C 0 1 Y N N -22.917 19.334 -2.278 7.053 -2.398 -0.095 C4 8N1 4 8N1 C5 C5 C 0 1 Y N N -22.534 18.213 -3.005 7.403 -1.047 -0.104 C5 8N1 5 8N1 C6 C6 C 0 1 Y N N -23.488 17.287 -3.395 6.414 -0.075 0.053 C6 8N1 6 8N1 C7 C7 C 0 1 N N N -21.091 17.997 -3.367 8.816 -0.648 -0.278 C7 8N1 7 8N1 C8 C8 C 0 1 N N N -20.191 18.928 -3.106 9.185 0.026 -1.357 C8 8N1 8 8N1 C10 C9 C 0 1 N N N -25.429 16.369 -5.959 1.626 0.804 0.029 C10 8N1 9 8N1 C11 C10 C 0 1 N N N -25.848 16.474 -3.477 4.028 0.594 0.380 C11 8N1 10 8N1 C12 C11 C 0 1 N N N -25.885 15.437 -2.356 3.940 1.007 1.851 C12 8N1 11 8N1 C13 C12 C 0 1 N N N -27.213 17.147 -3.559 4.376 1.816 -0.472 C13 8N1 12 8N1 C17 C13 C 0 1 Y N N -24.878 15.727 -8.256 -0.696 1.120 -0.387 C17 8N1 13 8N1 C18 C14 C 0 1 Y N N -24.433 14.625 -8.976 -0.574 2.471 -0.685 C18 8N1 14 8N1 C19 C15 C 0 1 Y N N -24.241 14.704 -10.346 -1.694 3.280 -0.704 C19 8N1 15 8N1 C20 C16 C 0 1 Y N N -24.503 15.894 -11.010 -2.939 2.748 -0.428 C20 8N1 16 8N1 C21 C17 C 0 1 Y N N -24.948 17.001 -10.311 -3.067 1.396 -0.129 C21 8N1 17 8N1 C22 C18 C 0 1 Y N N -25.139 16.925 -8.928 -1.944 0.581 -0.114 C22 8N1 18 8N1 C24 C19 C 0 1 N N R -25.644 19.374 -10.402 -4.460 -0.567 0.466 C24 8N1 19 8N1 C25 C20 C 0 1 N N R -25.317 20.442 -11.435 -5.624 -0.794 1.457 C25 8N1 20 8N1 C26 C21 C 0 1 N N R -26.388 21.499 -11.246 -6.259 -2.123 0.991 C26 8N1 21 8N1 C27 C22 C 0 1 N N R -27.425 20.848 -10.333 -5.404 -2.542 -0.226 C27 8N1 22 8N1 C29 C23 C 0 1 N N N -28.841 20.990 -10.875 -6.284 -3.184 -1.300 C29 8N1 23 8N1 C9 C24 C 0 1 N N N -20.719 16.867 -3.943 9.835 -1.007 0.772 C9 8N1 24 8N1 N1 N1 N 0 1 N N N -25.192 18.134 -11.018 -4.326 0.858 0.152 N1 8N1 25 8N1 N3 N2 N 0 1 N N N -25.455 15.827 -4.730 2.739 0.048 -0.052 N3 8N1 26 8N1 N4 N3 N 0 1 N N N -25.025 15.529 -6.916 0.440 0.302 -0.368 N4 8N1 27 8N1 O2 O1 O 0 1 N N N -25.744 17.528 -6.185 1.692 1.939 0.460 O2 8N1 28 8N1 O3 O2 O 0 1 N N N -27.059 19.468 -10.211 -4.831 -1.310 -0.715 O3 8N1 29 8N1 O4 O3 O 0 1 N N N -24.018 20.993 -11.212 -5.128 -0.916 2.792 O4 8N1 30 8N1 O5 O4 O 0 1 N N N -26.949 21.867 -12.511 -7.619 -1.919 0.601 O5 8N1 31 8N1 O6 O5 O 0 1 N N N -29.136 22.377 -11.083 -5.462 -3.668 -2.363 O6 8N1 32 8N1 CL1 CL1 CL 0 0 N N N -24.267 15.999 -12.786 -4.344 3.768 -0.453 CL1 8N1 33 8N1 H1 H1 H 0 1 N N N -26.244 18.738 -2.064 3.725 -2.087 0.352 H1 8N1 34 8N1 H2 H2 H 0 1 N N N -24.548 20.403 -1.382 5.460 -3.809 0.076 H2 8N1 35 8N1 H3 H3 H 0 1 N N N -22.175 20.056 -1.972 7.814 -3.155 -0.215 H3 8N1 36 8N1 H4 H4 H 0 1 N N N -23.194 16.412 -3.955 6.679 0.972 0.048 H4 8N1 37 8N1 H5 H5 H 0 1 N N N -20.490 19.850 -2.630 10.217 0.318 -1.485 H5 8N1 38 8N1 H6 H6 H 0 1 N N N -19.156 18.767 -3.368 8.455 0.284 -2.110 H6 8N1 39 8N1 H7 H7 H 0 1 N N N -26.180 15.924 -1.415 4.899 1.413 2.172 H7 8N1 40 8N1 H8 H8 H 0 1 N N N -26.614 14.652 -2.607 3.166 1.765 1.970 H8 8N1 41 8N1 H9 H9 H 0 1 N N N -24.888 14.988 -2.239 3.692 0.137 2.459 H9 8N1 42 8N1 H10 H10 H 0 1 N N N -27.451 17.613 -2.592 4.439 1.521 -1.520 H10 8N1 43 8N1 H11 H11 H 0 1 N N N -27.195 17.918 -4.343 3.602 2.574 -0.354 H11 8N1 44 8N1 H12 H12 H 0 1 N N N -27.978 16.395 -3.802 5.335 2.222 -0.151 H12 8N1 45 8N1 H13 H13 H 0 1 N N N -24.234 13.696 -8.462 0.398 2.890 -0.902 H13 8N1 46 8N1 H14 H14 H 0 1 N N N -23.889 13.843 -10.895 -1.596 4.331 -0.936 H14 8N1 47 8N1 H15 H15 H 0 1 N N N -25.487 17.789 -8.381 -2.041 -0.469 0.118 H15 8N1 48 8N1 H16 H16 H 0 1 N N N -25.098 19.572 -9.468 -3.529 -0.952 0.881 H16 8N1 49 8N1 H17 H17 H 0 1 N N N -25.394 20.014 -12.445 -6.347 0.019 1.389 H17 8N1 50 8N1 H18 H18 H 0 1 N N N -25.955 22.375 -10.741 -6.195 -2.874 1.779 H18 8N1 51 8N1 H19 H19 H 0 1 N N N -27.377 21.334 -9.348 -4.617 -3.230 0.083 H19 8N1 52 8N1 H20 H20 H 0 1 N N N -29.554 20.568 -10.152 -6.842 -4.013 -0.865 H20 8N1 53 8N1 H21 H21 H 0 1 N N N -28.924 20.450 -11.830 -6.982 -2.442 -1.689 H21 8N1 54 8N1 H22 H22 H 0 1 N N N -21.597 16.219 -4.080 9.891 -0.209 1.513 H22 8N1 55 8N1 H23 H23 H 0 1 N N N -20.268 17.086 -4.922 9.542 -1.936 1.261 H23 8N1 56 8N1 H24 H24 H 0 1 N N N -19.982 16.356 -3.306 10.810 -1.136 0.303 H24 8N1 57 8N1 H25 H25 H 0 1 N N N -25.889 17.892 -11.693 -5.111 1.427 0.138 H25 8N1 58 8N1 H26 H26 H 0 1 N N N -25.173 14.870 -4.663 2.687 -0.857 -0.395 H26 8N1 59 8N1 H27 H27 H 0 1 N N N -24.794 14.609 -6.599 0.374 -0.626 -0.641 H27 8N1 60 8N1 H28 H28 H 0 1 N N N -23.362 20.317 -11.335 -4.719 -0.110 3.134 H28 8N1 61 8N1 H29 H29 H 0 1 N N N -27.618 22.529 -12.381 -8.188 -1.597 1.313 H29 8N1 62 8N1 H30 H30 H 0 1 N N N -30.019 22.466 -11.421 -5.954 -4.088 -3.081 H30 8N1 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8N1 CL1 C20 SING N N 1 8N1 O5 C26 SING N N 2 8N1 C25 C26 SING N N 3 8N1 C25 O4 SING N N 4 8N1 C25 C24 SING N N 5 8N1 C26 C27 SING N N 6 8N1 O6 C29 SING N N 7 8N1 N1 C24 SING N N 8 8N1 N1 C21 SING N N 9 8N1 C20 C19 DOUB Y N 10 8N1 C20 C21 SING Y N 11 8N1 C29 C27 SING N N 12 8N1 C24 O3 SING N N 13 8N1 C19 C18 SING Y N 14 8N1 C27 O3 SING N N 15 8N1 C21 C22 DOUB Y N 16 8N1 C18 C17 DOUB Y N 17 8N1 C22 C17 SING Y N 18 8N1 C17 N4 SING N N 19 8N1 N4 C10 SING N N 20 8N1 O2 C10 DOUB N N 21 8N1 C10 N3 SING N N 22 8N1 N3 C11 SING N N 23 8N1 C9 C7 SING N N 24 8N1 C13 C11 SING N N 25 8N1 C11 C1 SING N N 26 8N1 C11 C12 SING N N 27 8N1 C6 C1 DOUB Y N 28 8N1 C6 C5 SING Y N 29 8N1 C7 C8 DOUB N N 30 8N1 C7 C5 SING N N 31 8N1 C1 C2 SING Y N 32 8N1 C5 C4 DOUB Y N 33 8N1 C2 C3 DOUB Y N 34 8N1 C4 C3 SING Y N 35 8N1 C2 H1 SING N N 36 8N1 C3 H2 SING N N 37 8N1 C4 H3 SING N N 38 8N1 C6 H4 SING N N 39 8N1 C8 H5 SING N N 40 8N1 C8 H6 SING N N 41 8N1 C12 H7 SING N N 42 8N1 C12 H8 SING N N 43 8N1 C12 H9 SING N N 44 8N1 C13 H10 SING N N 45 8N1 C13 H11 SING N N 46 8N1 C13 H12 SING N N 47 8N1 C18 H13 SING N N 48 8N1 C19 H14 SING N N 49 8N1 C22 H15 SING N N 50 8N1 C24 H16 SING N N 51 8N1 C25 H17 SING N N 52 8N1 C26 H18 SING N N 53 8N1 C27 H19 SING N N 54 8N1 C29 H20 SING N N 55 8N1 C29 H21 SING N N 56 8N1 C9 H22 SING N N 57 8N1 C9 H23 SING N N 58 8N1 C9 H24 SING N N 59 8N1 N1 H25 SING N N 60 8N1 N3 H26 SING N N 61 8N1 N4 H27 SING N N 62 8N1 O4 H28 SING N N 63 8N1 O5 H29 SING N N 64 8N1 O6 H30 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8N1 SMILES ACDLabs 12.01 "c1(cccc(c1)\C(=C)C)C(C)(C)NC(Nc2ccc(c(c2)NC3OC(C(C3O)O)CO)Cl)=O" 8N1 InChI InChI 1.03 "InChI=1S/C24H30ClN3O5/c1-13(2)14-6-5-7-15(10-14)24(3,4)28-23(32)26-16-8-9-17(25)18(11-16)27-22-21(31)20(30)19(12-29)33-22/h5-11,19-22,27,29-31H,1,12H2,2-4H3,(H2,26,28,32)/t19-,20+,21-,22-/m1/s1" 8N1 InChIKey InChI 1.03 RGENKIJBZZZCQP-CIAFKFPVSA-N 8N1 SMILES_CANONICAL CACTVS 3.385 "CC(=C)c1cccc(c1)C(C)(C)NC(=O)Nc2ccc(Cl)c(N[C@@H]3O[C@H](CO)[C@H](O)[C@H]3O)c2" 8N1 SMILES CACTVS 3.385 "CC(=C)c1cccc(c1)C(C)(C)NC(=O)Nc2ccc(Cl)c(N[CH]3O[CH](CO)[CH](O)[CH]3O)c2" 8N1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(=C)c1cccc(c1)C(C)(C)NC(=O)Nc2ccc(c(c2)N[C@H]3[C@@H]([C@H]([C@H](O3)CO)O)O)Cl" 8N1 SMILES "OpenEye OEToolkits" 2.0.6 "CC(=C)c1cccc(c1)C(C)(C)NC(=O)Nc2ccc(c(c2)NC3C(C(C(O3)CO)O)O)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 8N1 "SYSTEMATIC NAME" ACDLabs 12.01 "N-{2-chloro-5-[({2-[3-(prop-1-en-2-yl)phenyl]propan-2-yl}carbamoyl)amino]phenyl}-beta-D-xylofuranosylamine" 8N1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "1-[4-chloranyl-3-[[(2~{R},3~{R},4~{R},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]amino]phenyl]-3-[2-(3-prop-1-en-2-ylphenyl)propan-2-yl]urea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8N1 "Create component" 2017-02-20 RCSB 8N1 "Initial release" 2017-03-08 RCSB #