data_8O9 # _chem_comp.id 8O9 _chem_comp.name "(3S)-piperidin-3-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H11 N O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(S)-3-Hydroxypiperidine" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-28 _chem_comp.pdbx_modified_date 2022-11-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 101.147 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8O9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7Q3M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8O9 C02 C1 C 0 1 N N S -6.332 -14.636 -18.024 -0.982 -0.034 0.337 C02 8O9 1 8O9 C03 C2 C 0 1 N N N -6.064 -15.984 -17.379 -0.273 -1.280 -0.201 C03 8O9 2 8O9 C04 C3 C 0 1 N N N -7.220 -16.360 -16.469 1.195 -1.249 0.230 C04 8O9 3 8O9 C05 C4 C 0 1 N N N -7.446 -15.284 -15.409 1.846 0.037 -0.284 C05 8O9 4 8O9 C07 C5 C 0 1 N N N -6.570 -13.562 -16.951 -0.268 1.217 -0.180 C07 8O9 5 8O9 N06 N1 N 0 1 N N N -7.687 -13.975 -16.064 1.133 1.199 0.260 N06 8O9 6 8O9 O01 O1 O 0 1 N N N -5.192 -14.269 -18.710 -2.340 -0.027 -0.108 O01 8O9 7 8O9 H1 H1 H 0 1 N N N -7.209 -14.703 -18.684 -0.956 -0.043 1.427 H1 8O9 8 8O9 H2 H2 H 0 1 N N N -5.953 -16.748 -18.163 -0.752 -2.173 0.200 H2 8O9 9 8O9 H3 H3 H 0 1 N N N -5.138 -15.928 -16.788 -0.333 -1.291 -1.290 H3 8O9 10 8O9 H4 H4 H 0 1 N N N -8.133 -16.470 -17.072 1.255 -1.277 1.318 H4 8O9 11 8O9 H5 H5 H 0 1 N N N -6.992 -17.314 -15.972 1.715 -2.112 -0.186 H5 8O9 12 8O9 H6 H6 H 0 1 N N N -8.320 -15.552 -14.797 2.888 0.069 0.034 H6 8O9 13 8O9 H7 H7 H 0 1 N N N -6.556 -15.212 -14.766 1.798 0.058 -1.373 H7 8O9 14 8O9 H8 H8 H 0 1 N N N -5.656 -13.435 -16.352 -0.306 1.232 -1.270 H8 8O9 15 8O9 H9 H9 H 0 1 N N N -6.824 -12.609 -17.438 -0.761 2.105 0.213 H9 8O9 16 8O9 H10 H10 H 0 1 N N N -7.806 -13.280 -15.355 1.600 2.059 0.012 H10 8O9 17 8O9 H12 H12 H 0 1 N N N -5.330 -13.426 -19.126 -2.850 0.736 0.196 H12 8O9 18 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8O9 O01 C02 SING N N 1 8O9 C02 C03 SING N N 2 8O9 C02 C07 SING N N 3 8O9 C03 C04 SING N N 4 8O9 C07 N06 SING N N 5 8O9 C04 C05 SING N N 6 8O9 N06 C05 SING N N 7 8O9 C02 H1 SING N N 8 8O9 C03 H2 SING N N 9 8O9 C03 H3 SING N N 10 8O9 C04 H4 SING N N 11 8O9 C04 H5 SING N N 12 8O9 C05 H6 SING N N 13 8O9 C05 H7 SING N N 14 8O9 C07 H8 SING N N 15 8O9 C07 H9 SING N N 16 8O9 N06 H10 SING N N 17 8O9 O01 H12 SING N N 18 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8O9 InChI InChI 1.06 InChI=1S/C5H11NO/c7-5-2-1-3-6-4-5/h5-7H,1-4H2/t5-/m0/s1 8O9 InChIKey InChI 1.06 BIWOSRSKDCZIFM-YFKPBYRVSA-N 8O9 SMILES_CANONICAL CACTVS 3.385 "O[C@H]1CCCNC1" 8O9 SMILES CACTVS 3.385 "O[CH]1CCCNC1" 8O9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1C[C@@H](CNC1)O" 8O9 SMILES "OpenEye OEToolkits" 2.0.7 "C1CC(CNC1)O" # _pdbx_chem_comp_identifier.comp_id 8O9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S})-piperidin-3-ol" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 8O9 _pdbx_chem_comp_synonyms.name "(S)-3-Hydroxypiperidine" _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8O9 "Create component" 2021-10-28 PDBE 8O9 "Modify descriptor" 2022-08-22 RCSB 8O9 "Initial release" 2022-11-09 RCSB #