data_8OQ # _chem_comp.id 8OQ _chem_comp.name "alpha-D-aceric acid" _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H10 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-02-14 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 178.140 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8OQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5MUI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8OQ O32 O32 O 0 1 N N N 23.255 -12.242 -13.576 -1.870 0.520 1.431 O32 8OQ 1 8OQ C31 C31 C 0 1 N N N 24.030 -12.795 -12.745 -1.756 0.390 0.235 C31 8OQ 2 8OQ O6 O6 O 0 1 N N N 24.362 -14.012 -12.858 -2.746 0.788 -0.580 O6 8OQ 3 8OQ C3 C3 C 0 1 N N R 24.536 -11.971 -11.560 -0.501 -0.212 -0.342 C3 8OQ 4 8OQ O3 O3 O 0 1 N N N 24.128 -10.601 -11.709 -0.790 -0.929 -1.544 O3 8OQ 5 8OQ C4 C4 C 0 1 N N R 26.066 -12.116 -11.318 0.194 -1.126 0.689 C4 8OQ 6 8OQ C5 C5 C 0 1 N N N 26.915 -10.841 -11.427 -0.123 -2.591 0.382 C5 8OQ 7 8OQ O4 O4 O 0 1 N N N 26.254 -12.660 -9.999 1.605 -0.902 0.585 O4 8OQ 8 8OQ C1 C1 C 0 1 N N S 25.001 -13.105 -9.453 1.874 0.051 -0.455 C1 8OQ 9 8OQ O1 O1 O 0 1 N N N 24.873 -14.529 -9.511 2.967 0.895 -0.084 O1 8OQ 10 8OQ C2 C2 C 0 1 N N R 23.875 -12.498 -10.288 0.573 0.881 -0.591 C2 8OQ 11 8OQ H1 H1 H 0 1 N N N 23.945 -14.385 -13.626 -3.530 1.172 -0.164 H1 8OQ 12 8OQ H2 H2 H 0 1 N N N 23.590 -10.513 -12.487 -1.189 -0.388 -2.239 H2 8OQ 13 8OQ H3 H3 H 0 1 N N N 26.449 -12.835 -12.057 -0.147 -0.876 1.694 H3 8OQ 14 8OQ H4 H4 H 0 1 N N N 27.970 -11.085 -11.234 0.236 -2.838 -0.618 H4 8OQ 15 8OQ H5 H5 H 0 1 N N N 26.815 -10.419 -12.438 0.371 -3.231 1.113 H5 8OQ 16 8OQ H6 H6 H 0 1 N N N 26.568 -10.105 -10.687 -1.200 -2.748 0.430 H6 8OQ 17 8OQ H7 H7 H 0 1 N N N 24.898 -12.758 -8.414 2.095 -0.463 -1.391 H7 8OQ 18 8OQ H8 H8 H 0 1 N N N 25.564 -14.931 -8.998 3.799 0.422 0.056 H8 8OQ 19 8OQ H9 H9 H 0 1 N N N 23.897 -11.528 -9.771 0.479 1.304 -1.591 H9 8OQ 20 8OQ O2 O2 O 0 1 N N N 22.544 -12.727 -10.056 0.508 1.903 0.406 O2 8OQ 21 8OQ H10 H10 H 0 1 N N N 22.428 -13.055 -9.172 1.161 2.607 0.291 H10 8OQ 22 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OQ O32 C31 DOUB N N 1 8OQ O6 C31 SING N N 2 8OQ C31 C3 SING N N 3 8OQ O3 C3 SING N N 4 8OQ C3 C4 SING N N 5 8OQ C3 C2 SING N N 6 8OQ C5 C4 SING N N 7 8OQ C4 O4 SING N N 8 8OQ C2 C1 SING N N 9 8OQ O4 C1 SING N N 10 8OQ O1 C1 SING N N 11 8OQ O6 H1 SING N N 12 8OQ O3 H2 SING N N 13 8OQ C4 H3 SING N N 14 8OQ C5 H4 SING N N 15 8OQ C5 H5 SING N N 16 8OQ C5 H6 SING N N 17 8OQ C1 H7 SING N N 18 8OQ O1 H8 SING N N 19 8OQ C2 H9 SING N N 20 8OQ C2 O2 SING N N 21 8OQ O2 H10 SING N N 22 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8OQ InChI InChI 1.03 "InChI=1S/C6H10O6/c1-2-6(11,5(9)10)3(7)4(8)12-2/h2-4,7-8,11H,1H3,(H,9,10)/t2-,3+,4+,6+/m1/s1" 8OQ InChIKey InChI 1.03 PAIOZXJXGSOKFN-SYXVZTBSSA-N 8OQ SMILES_CANONICAL CACTVS 3.385 "C[C@H]1O[C@H](O)[C@H](O)[C@]1(O)C(O)=O" 8OQ SMILES CACTVS 3.385 "C[CH]1O[CH](O)[CH](O)[C]1(O)C(O)=O" 8OQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@@H]1[C@]([C@H]([C@H](O1)O)O)(C(=O)O)O" 8OQ SMILES "OpenEye OEToolkits" 2.0.6 "CC1C(C(C(O1)O)O)(C(=O)O)O" # _pdbx_chem_comp_identifier.comp_id 8OQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R},4~{R},5~{S})-2-methyl-3,4,5-tris(oxidanyl)oxolane-3-carboxylic acid" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support 8OQ "CARBOHYDRATE ISOMER" D PDB ? 8OQ "CARBOHYDRATE RING" furanose PDB ? 8OQ "CARBOHYDRATE ANOMER" alpha PDB ? 8OQ "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8OQ "Create component" 2017-02-14 EBI 8OQ "Other modification" 2017-02-18 EBI 8OQ "Initial release" 2017-03-22 RCSB 8OQ "Other modification" 2020-07-03 RCSB 8OQ "Modify internal type" 2020-07-17 RCSB 8OQ "Modify linking type" 2020-07-17 RCSB ##