data_8V9 # _chem_comp.id 8V9 _chem_comp.name "(4R)-3-[(2S,3S)-3-[[(2R)-2-[2-(4-hydroxyphenyl)ethanoylamino]-3-methylsulfanyl-propanoyl]amino]-2-oxidanyl-4-phenyl-butanoyl]-5,5-dimethyl-N-[(1S,2R)-2-oxidanyl-2,3-dihydro-1H-inden-1-yl]-1,3-thiazolidine-4-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C37 H44 N4 O7 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-10-04 _chem_comp.pdbx_modified_date 2018-07-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 720.898 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8V9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5YIA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8V9 C34 C1 C 0 1 Y N N 22.871 -20.351 -25.626 -8.209 2.015 -1.075 C34 8V9 1 8V9 C35 C2 C 0 1 Y N N 20.850 -18.950 -27.117 -10.205 0.196 -0.465 C35 8V9 2 8V9 C36 C3 C 0 1 Y N N 22.399 -19.178 -25.188 -9.457 2.467 -0.692 C36 8V9 3 8V9 C37 C4 C 0 1 Y N N 21.310 -18.429 -25.991 -10.459 1.557 -0.386 C37 8V9 4 8V9 C32 C5 C 0 1 Y N N 22.336 -20.958 -26.932 -7.960 0.658 -1.159 C32 8V9 5 8V9 C27 C6 C 0 1 Y N N 16.303 -22.950 -27.810 -0.340 2.445 -2.515 C27 8V9 6 8V9 C28 C7 C 0 1 Y N N 15.521 -22.099 -27.160 -1.562 3.023 -2.226 C28 8V9 7 8V9 C30 C8 C 0 1 N N N 22.886 -22.324 -27.459 -6.597 0.168 -1.577 C30 8V9 8 8V9 C29 C9 C 0 1 N N N 21.815 -23.461 -27.310 -5.729 -0.003 -0.357 C29 8V9 9 8V9 C10 C10 C 0 1 N N N 12.304 -23.114 -18.387 8.764 1.316 -0.284 C10 8V9 10 8V9 S01 S1 S 0 1 N N N 19.359 -26.149 -19.766 2.933 -3.813 -1.450 S01 8V9 11 8V9 S02 S2 S 0 1 N N N 23.119 -27.542 -26.573 -5.610 -2.123 1.787 S02 8V9 12 8V9 O01 O1 O 0 1 N N N 12.573 -25.467 -18.329 8.033 0.004 -2.217 O01 8V9 13 8V9 O02 O2 O 0 1 N N N 16.799 -24.033 -20.090 3.850 0.419 -0.590 O02 8V9 14 8V9 O03 O3 O 0 1 N N N 17.772 -28.489 -24.630 0.978 -0.610 3.140 O03 8V9 15 8V9 O04 O4 O 0 1 N N N 16.051 -27.946 -22.604 3.350 -0.648 2.056 O04 8V9 16 8V9 O05 O5 O 0 1 N N N 20.246 -24.763 -24.374 -1.867 -0.280 -0.855 O05 8V9 17 8V9 O06 O6 O 0 1 N N N 20.741 -23.418 -27.834 -6.173 0.248 0.743 O06 8V9 18 8V9 O07 O7 O 0 1 N N N 20.796 -17.192 -25.527 -11.688 1.999 -0.010 O07 8V9 19 8V9 N01 N1 N 0 1 N N N 17.509 -26.492 -21.534 2.859 -1.862 0.265 N01 8V9 20 8V9 N02 N2 N 0 1 N N N 14.857 -25.002 -19.397 5.987 -0.178 -0.574 N02 8V9 21 8V9 N03 N3 N 0 1 N N N 18.810 -26.080 -25.670 -1.201 -0.604 1.236 N03 8V9 22 8V9 N04 N4 N 0 1 N N N 22.157 -24.621 -26.502 -4.459 -0.435 -0.489 N04 8V9 23 8V9 C01 C11 C 0 1 N N R 16.775 -26.424 -20.280 4.228 -1.882 -0.228 C01 8V9 24 8V9 C02 C12 C 0 1 N N N 17.788 -26.941 -19.234 4.392 -2.691 -1.534 C02 8V9 25 8V9 C03 C13 C 0 1 N N S 14.276 -23.835 -18.991 6.420 1.201 -0.816 C03 8V9 26 8V9 C04 C14 C 0 1 N N N 18.778 -25.694 -21.423 1.881 -2.586 -0.570 C04 8V9 27 8V9 C05 C15 C 0 1 N N N 16.194 -25.034 -19.957 4.674 -0.464 -0.477 C05 8V9 28 8V9 C06 C16 C 0 1 N N R 13.162 -24.098 -18.043 7.808 1.215 -1.492 C06 8V9 29 8V9 C07 C17 C 0 1 N N N 17.927 -28.468 -19.402 5.699 -3.487 -1.528 C07 8V9 30 8V9 C08 C18 C 0 1 N N N 17.462 -26.542 -17.777 4.313 -1.779 -2.760 C08 8V9 31 8V9 C09 C19 C 0 1 Y N N 13.498 -23.131 -20.294 6.611 1.929 0.497 C09 8V9 32 8V9 C11 C20 C 0 1 Y N N 12.220 -22.715 -19.733 7.958 1.996 0.803 C11 8V9 33 8V9 C12 C21 C 0 1 N N N 17.081 -27.330 -22.666 2.510 -1.229 1.403 C12 8V9 34 8V9 C13 C22 C 0 1 N N S 17.981 -27.333 -23.920 1.075 -1.243 1.863 C13 8V9 35 8V9 C14 C23 C 0 1 N N S 17.694 -26.045 -24.746 0.208 -0.488 0.853 C14 8V9 36 8V9 C15 C24 C 0 1 Y N N 13.723 -22.910 -21.603 5.681 2.490 1.355 C15 8V9 37 8V9 C16 C25 C 0 1 Y N N 11.200 -21.995 -20.752 8.370 2.623 1.966 C16 8V9 38 8V9 C17 C26 C 0 1 N N N 16.344 -26.106 -25.470 0.613 0.987 0.835 C17 8V9 39 8V9 C18 C27 C 0 1 Y N N 12.927 -22.337 -22.396 6.094 3.115 2.516 C18 8V9 40 8V9 C19 C28 C 0 1 Y N N 11.684 -21.849 -22.159 7.440 3.182 2.822 C19 8V9 41 8V9 C20 C29 C 0 1 Y N N 16.041 -24.677 -26.062 -0.154 1.706 -0.245 C20 8V9 42 8V9 C22 C30 C 0 1 N N R 21.192 -25.669 -26.366 -3.615 -0.602 0.697 C22 8V9 43 8V9 C23 C31 C 0 1 Y N N 15.136 -23.699 -25.309 -1.377 2.283 0.043 C23 8V9 44 8V9 C24 C32 C 0 1 Y N N 16.583 -24.339 -27.210 0.364 1.786 -1.524 C24 8V9 45 8V9 C25 C33 C 0 1 N N N 21.816 -26.830 -25.650 -3.866 -1.980 1.312 C25 8V9 46 8V9 C26 C34 C 0 1 Y N N 14.894 -22.488 -25.837 -2.080 2.942 -0.948 C26 8V9 47 8V9 C31 C35 C 0 1 N N N 22.589 -27.976 -28.201 -5.708 -3.795 2.484 C31 8V9 48 8V9 C33 C36 C 0 1 Y N N 21.395 -20.305 -27.630 -8.958 -0.251 -0.859 C33 8V9 49 8V9 C21 C37 C 0 1 N N N 20.065 -25.383 -25.375 -2.166 -0.484 0.303 C21 8V9 50 8V9 H1 H1 H 0 1 N N N 23.629 -20.872 -25.060 -7.429 2.723 -1.314 H1 8V9 51 8V9 H2 H2 H 0 1 N N N 20.091 -18.428 -27.681 -10.983 -0.514 -0.228 H2 8V9 52 8V9 H3 H3 H 0 1 N N N 22.780 -18.753 -24.271 -9.653 3.527 -0.631 H3 8V9 53 8V9 H4 H4 H 0 1 N N N 16.741 -22.669 -28.756 0.063 2.504 -3.515 H4 8V9 54 8V9 H5 H5 H 0 1 N N N 15.330 -21.121 -27.577 -2.112 3.538 -3.000 H5 8V9 55 8V9 H6 H6 H 0 1 N N N 23.782 -22.597 -26.882 -6.697 -0.789 -2.089 H6 8V9 56 8V9 H7 H7 H 0 1 N N N 23.152 -22.218 -28.521 -6.140 0.894 -2.249 H7 8V9 57 8V9 H8 H8 H 0 1 N N N 12.586 -22.224 -17.805 9.071 0.322 0.040 H8 8V9 58 8V9 H9 H9 H 0 1 N N N 11.299 -23.445 -18.087 9.636 1.916 -0.541 H9 8V9 59 8V9 H10 H10 H 0 1 N N N 11.860 -25.638 -17.725 8.922 -0.073 -2.588 H10 8V9 60 8V9 H11 H11 H 0 1 N N N 17.014 -28.943 -24.280 1.270 0.312 3.146 H11 8V9 61 8V9 H12 H12 H 0 1 N N N 21.225 -16.956 -24.713 -11.785 2.126 0.944 H12 8V9 62 8V9 H13 H13 H 0 1 N N N 14.347 -25.857 -19.306 6.645 -0.884 -0.483 H13 8V9 63 8V9 H14 H14 H 0 1 N N N 18.722 -26.590 -26.526 -1.440 -0.766 2.162 H14 8V9 64 8V9 H15 H15 H 0 1 N N N 23.047 -24.685 -26.051 -4.104 -0.637 -1.369 H15 8V9 65 8V9 H16 H16 H 0 1 N N N 15.939 -27.137 -20.318 4.869 -2.321 0.536 H16 8V9 66 8V9 H17 H17 H 0 1 N N N 14.994 -23.114 -18.574 5.692 1.722 -1.437 H17 8V9 67 8V9 H18 H18 H 0 1 N N N 19.504 -25.986 -22.196 1.402 -1.910 -1.278 H18 8V9 68 8V9 H19 H19 H 0 1 N N N 18.580 -24.614 -21.495 1.139 -3.088 0.051 H19 8V9 69 8V9 H20 H20 H 0 1 N N N 13.505 -24.033 -17.000 7.916 2.081 -2.145 H20 8V9 70 8V9 H21 H21 H 0 1 N N N 18.646 -28.855 -18.664 5.733 -4.136 -2.403 H21 8V9 71 8V9 H22 H22 H 0 1 N N N 16.948 -28.945 -19.245 6.543 -2.798 -1.552 H22 8V9 72 8V9 H23 H23 H 0 1 N N N 18.286 -28.694 -20.417 5.750 -4.093 -0.624 H23 8V9 73 8V9 H24 H24 H 0 1 N N N 18.231 -26.950 -17.104 3.396 -1.191 -2.717 H24 8V9 74 8V9 H25 H25 H 0 1 N N N 17.445 -25.445 -17.692 5.173 -1.109 -2.770 H25 8V9 75 8V9 H26 H26 H 0 1 N N N 16.478 -26.947 -17.498 4.313 -2.385 -3.665 H26 8V9 76 8V9 H27 H27 H 0 1 N N N 19.026 -27.284 -23.581 0.728 -2.274 1.940 H27 8V9 77 8V9 H28 H28 H 0 1 N N N 17.738 -25.161 -24.093 0.350 -0.916 -0.140 H28 8V9 78 8V9 H29 H29 H 0 1 N N N 14.664 -23.252 -22.008 4.629 2.439 1.117 H29 8V9 79 8V9 H30 H30 H 0 1 N N N 10.229 -21.641 -20.439 9.422 2.675 2.206 H30 8V9 80 8V9 H31 H31 H 0 1 N N N 15.553 -26.391 -24.761 0.387 1.437 1.802 H31 8V9 81 8V9 H32 H32 H 0 1 N N N 16.390 -26.845 -26.284 1.682 1.068 0.637 H32 8V9 82 8V9 H33 H33 H 0 1 N N N 13.286 -22.218 -23.408 5.366 3.552 3.183 H33 8V9 83 8V9 H34 H34 H 0 1 N N N 11.086 -21.388 -22.931 7.765 3.670 3.728 H34 8V9 84 8V9 H35 H35 H 0 1 N N N 20.782 -25.981 -27.338 -3.858 0.171 1.427 H35 8V9 85 8V9 H36 H36 H 0 1 N N N 14.697 -23.980 -24.363 -1.782 2.220 1.042 H36 8V9 86 8V9 H37 H37 H 0 1 N N N 17.224 -25.035 -27.732 1.319 1.335 -1.749 H37 8V9 87 8V9 H38 H38 H 0 1 N N N 21.045 -27.595 -25.474 -3.238 -2.104 2.194 H38 8V9 88 8V9 H39 H39 H 0 1 N N N 22.213 -26.481 -24.685 -3.623 -2.753 0.582 H39 8V9 89 8V9 H40 H40 H 0 1 N N N 14.252 -21.791 -25.318 -3.035 3.395 -0.722 H40 8V9 90 8V9 H41 H41 H 0 1 N N N 23.429 -28.420 -28.755 -5.420 -4.522 1.724 H41 8V9 91 8V9 H42 H42 H 0 1 N N N 21.767 -28.704 -28.137 -5.034 -3.873 3.336 H42 8V9 92 8V9 H43 H43 H 0 1 N N N 22.240 -27.074 -28.726 -6.730 -3.994 2.808 H43 8V9 93 8V9 H44 H44 H 0 1 N N N 21.017 -20.725 -28.551 -8.759 -1.311 -0.921 H44 8V9 94 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8V9 C31 S02 SING N N 1 8V9 O06 C29 DOUB N N 2 8V9 C27 C24 DOUB Y N 3 8V9 C27 C28 SING Y N 4 8V9 C33 C35 DOUB Y N 5 8V9 C33 C32 SING Y N 6 8V9 C30 C29 SING N N 7 8V9 C30 C32 SING N N 8 8V9 C29 N04 SING N N 9 8V9 C24 C20 SING Y N 10 8V9 C28 C26 DOUB Y N 11 8V9 C35 C37 SING Y N 12 8V9 C32 C34 DOUB Y N 13 8V9 S02 C25 SING N N 14 8V9 N04 C22 SING N N 15 8V9 C22 C25 SING N N 16 8V9 C22 C21 SING N N 17 8V9 C20 C17 SING N N 18 8V9 C20 C23 DOUB Y N 19 8V9 C37 O07 SING N N 20 8V9 C37 C36 DOUB Y N 21 8V9 C26 C23 SING Y N 22 8V9 N03 C21 SING N N 23 8V9 N03 C14 SING N N 24 8V9 C34 C36 SING Y N 25 8V9 C17 C14 SING N N 26 8V9 C21 O05 DOUB N N 27 8V9 C14 C13 SING N N 28 8V9 O03 C13 SING N N 29 8V9 C13 C12 SING N N 30 8V9 C12 O04 DOUB N N 31 8V9 C12 N01 SING N N 32 8V9 C18 C19 DOUB Y N 33 8V9 C18 C15 SING Y N 34 8V9 C19 C16 SING Y N 35 8V9 C15 C09 DOUB Y N 36 8V9 N01 C04 SING N N 37 8V9 N01 C01 SING N N 38 8V9 C04 S01 SING N N 39 8V9 C16 C11 DOUB Y N 40 8V9 C09 C11 SING Y N 41 8V9 C09 C03 SING N N 42 8V9 C01 C05 SING N N 43 8V9 C01 C02 SING N N 44 8V9 O02 C05 DOUB N N 45 8V9 C05 N02 SING N N 46 8V9 S01 C02 SING N N 47 8V9 C11 C10 SING N N 48 8V9 C07 C02 SING N N 49 8V9 N02 C03 SING N N 50 8V9 C02 C08 SING N N 51 8V9 C03 C06 SING N N 52 8V9 C10 C06 SING N N 53 8V9 O01 C06 SING N N 54 8V9 C34 H1 SING N N 55 8V9 C35 H2 SING N N 56 8V9 C36 H3 SING N N 57 8V9 C27 H4 SING N N 58 8V9 C28 H5 SING N N 59 8V9 C30 H6 SING N N 60 8V9 C30 H7 SING N N 61 8V9 C10 H8 SING N N 62 8V9 C10 H9 SING N N 63 8V9 O01 H10 SING N N 64 8V9 O03 H11 SING N N 65 8V9 O07 H12 SING N N 66 8V9 N02 H13 SING N N 67 8V9 N03 H14 SING N N 68 8V9 N04 H15 SING N N 69 8V9 C01 H16 SING N N 70 8V9 C03 H17 SING N N 71 8V9 C04 H18 SING N N 72 8V9 C04 H19 SING N N 73 8V9 C06 H20 SING N N 74 8V9 C07 H21 SING N N 75 8V9 C07 H22 SING N N 76 8V9 C07 H23 SING N N 77 8V9 C08 H24 SING N N 78 8V9 C08 H25 SING N N 79 8V9 C08 H26 SING N N 80 8V9 C13 H27 SING N N 81 8V9 C14 H28 SING N N 82 8V9 C15 H29 SING N N 83 8V9 C16 H30 SING N N 84 8V9 C17 H31 SING N N 85 8V9 C17 H32 SING N N 86 8V9 C18 H33 SING N N 87 8V9 C19 H34 SING N N 88 8V9 C22 H35 SING N N 89 8V9 C23 H36 SING N N 90 8V9 C24 H37 SING N N 91 8V9 C25 H38 SING N N 92 8V9 C25 H39 SING N N 93 8V9 C26 H40 SING N N 94 8V9 C31 H41 SING N N 95 8V9 C31 H42 SING N N 96 8V9 C31 H43 SING N N 97 8V9 C33 H44 SING N N 98 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8V9 InChI InChI 1.03 ;InChI=1S/C37H44N4O7S2/c1-37(2)33(35(47)40-31-26-12-8-7-11-24(26)19-29(31)43)41(21-50-37)36(48)32(45)27(17-22-9-5-4-6-10-22)39-34(46)28(20-49-3)38-30(44)18-23-13-15-25(42)16-14-23/h4-16,27-29,31-33,42-43,45H,17-21H2,1-3H3,(H,38,44)(H,39,46)(H,40,47)/t27-,28-,29+,31-,32-,33+/m0/s1 ; 8V9 InChIKey InChI 1.03 OONNUXMESNYHOP-ACUZRORGSA-N 8V9 SMILES_CANONICAL CACTVS 3.385 "CSC[C@H](NC(=O)Cc1ccc(O)cc1)C(=O)N[C@@H](Cc2ccccc2)[C@H](O)C(=O)N3CSC(C)(C)[C@H]3C(=O)N[C@@H]4[C@H](O)Cc5ccccc45" 8V9 SMILES CACTVS 3.385 "CSC[CH](NC(=O)Cc1ccc(O)cc1)C(=O)N[CH](Cc2ccccc2)[CH](O)C(=O)N3CSC(C)(C)[CH]3C(=O)N[CH]4[CH](O)Cc5ccccc45" 8V9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC1([C@H](N(CS1)C(=O)[C@H]([C@H](Cc2ccccc2)NC(=O)[C@H](CSC)NC(=O)Cc3ccc(cc3)O)O)C(=O)N[C@H]4c5ccccc5C[C@H]4O)C" 8V9 SMILES "OpenEye OEToolkits" 2.0.6 "CC1(C(N(CS1)C(=O)C(C(Cc2ccccc2)NC(=O)C(CSC)NC(=O)Cc3ccc(cc3)O)O)C(=O)NC4c5ccccc5CC4O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 8V9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(4~{R})-3-[(2~{S},3~{S})-3-[[(2~{R})-2-[2-(4-hydroxyphenyl)ethanoylamino]-3-methylsulfanyl-propanoyl]amino]-2-oxidanyl-4-phenyl-butanoyl]-5,5-dimethyl-~{N}-[(1~{S},2~{R})-2-oxidanyl-2,3-dihydro-1~{H}-inden-1-yl]-1,3-thiazolidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8V9 "Create component" 2017-10-04 PDBJ 8V9 "Initial release" 2018-07-11 RCSB #