data_8YA # _chem_comp.id 8YA _chem_comp.name "3-amino-1-{4-[6-chloro-8-fluoro-7-(5-methyl-1H-indazol-4-yl)quinazolin-4-yl]piperazin-1-yl}propan-1-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H23 Cl F N7 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "KRAS(G12C) inhibitor, aziridine form, bound form" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-03-20 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 467.926 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8YA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5V6V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8YA C10 C1 C 0 1 Y N N 0.449 3.586 9.028 6.688 0.935 0.811 C10 8YA 1 8YA C13 C2 C 0 1 N N N 1.798 0.040 9.417 3.702 0.064 2.956 C13 8YA 2 8YA C20 C3 C 0 1 Y N N -3.231 -4.056 10.038 -1.423 -1.286 -0.169 C20 8YA 3 8YA C22 C4 C 0 1 N N N -4.078 -6.441 9.407 -3.132 -0.398 -1.512 C22 8YA 4 8YA C26 C5 C 0 1 N N N -5.544 -9.559 6.740 -7.219 0.723 0.673 C26 8YA 5 8YA CL CL1 CL 0 0 N N N -0.470 -1.024 6.774 2.049 2.468 0.389 CL 8YA 6 8YA C02 C6 C 0 1 Y N N -1.242 -1.317 8.345 1.602 0.796 0.254 C02 8YA 7 8YA C03 C7 C 0 1 Y N N -1.214 -0.375 9.359 2.598 -0.194 0.306 C03 8YA 8 8YA C04 C8 C 0 1 Y N N -0.556 0.995 9.239 4.016 0.198 0.475 C04 8YA 9 8YA C05 C9 C 0 1 Y N N -1.445 2.086 9.106 4.826 0.438 -0.655 C05 8YA 10 8YA C06 C10 C 0 1 Y N N -2.879 2.210 9.026 4.591 0.401 -2.048 C06 8YA 11 8YA N07 N1 N 0 1 Y N N -3.179 3.489 8.902 5.694 0.711 -2.666 N07 8YA 12 8YA N08 N2 N 0 1 Y N N -2.017 4.188 8.869 6.697 0.991 -1.730 N08 8YA 13 8YA C09 C11 C 0 1 Y N N -0.950 3.374 8.993 6.169 0.815 -0.476 C09 8YA 14 8YA C11 C12 C 0 1 Y N N 1.320 2.516 9.162 5.888 0.687 1.905 C11 8YA 15 8YA C12 C13 C 0 1 Y N N 0.825 1.206 9.267 4.561 0.320 1.744 C12 8YA 16 8YA C14 C14 C 0 1 Y N N -1.844 -0.659 10.561 2.263 -1.536 0.201 C14 8YA 17 8YA F15 F1 F 0 1 N N N -1.823 0.254 11.567 3.223 -2.485 0.250 F15 8YA 18 8YA C16 C15 C 0 1 Y N N -2.507 -1.897 10.759 0.918 -1.899 0.042 C16 8YA 19 8YA N17 N3 N 0 1 Y N N -3.120 -2.147 11.966 0.538 -3.181 -0.065 N17 8YA 20 8YA C18 C16 C 0 1 Y N N -3.767 -3.312 12.164 -0.727 -3.490 -0.217 C18 8YA 21 8YA N19 N4 N 0 1 Y N N -3.807 -4.230 11.198 -1.689 -2.582 -0.264 N19 8YA 22 8YA N21 N5 N 0 1 N N N -3.392 -5.154 9.090 -2.436 -0.350 -0.220 N21 8YA 23 8YA C23 C17 C 0 1 N N N -5.032 -6.786 8.260 -4.123 0.768 -1.599 C23 8YA 24 8YA N24 N6 N 0 1 N N N -4.272 -7.284 7.193 -4.999 0.725 -0.418 N24 8YA 25 8YA C25 C18 C 0 1 N N N -4.451 -8.531 6.456 -6.339 0.768 -0.550 C25 8YA 26 8YA C27 C19 C 0 1 N N N -6.973 -9.118 6.406 -8.687 0.786 0.248 C27 8YA 27 8YA N28 N7 N 0 1 N N N -7.707 -8.723 7.608 -9.544 0.742 1.441 N28 8YA 28 8YA O29 O1 O 0 1 N N N -3.668 -8.774 5.594 -6.838 0.844 -1.653 O29 8YA 29 8YA C30 C20 C 0 1 N N N -3.217 -6.429 6.817 -4.373 0.633 0.910 C30 8YA 30 8YA C31 C21 C 0 1 N N N -2.997 -5.161 7.645 -3.373 -0.528 0.897 C31 8YA 31 8YA C32 C22 C 0 1 Y N N -2.547 -2.833 9.777 -0.074 -0.888 -0.009 C32 8YA 32 8YA C33 C23 C 0 1 Y N N -1.903 -2.521 8.533 0.292 0.459 0.100 C33 8YA 33 8YA H101 H1 H 0 0 N N N 0.841 4.589 8.950 7.720 1.220 0.952 H101 8YA 34 8YA H131 H2 H 0 0 N N N 1.993 -0.140 10.484 3.763 -0.989 3.229 H131 8YA 35 8YA H132 H3 H 0 0 N N N 1.360 -0.863 8.967 4.055 0.676 3.787 H132 8YA 36 8YA H133 H4 H 0 0 N N N 2.742 0.283 8.908 2.668 0.322 2.729 H133 8YA 37 8YA H221 H5 H 0 0 N N N -4.647 -6.336 10.343 -2.405 -0.318 -2.320 H221 8YA 38 8YA H222 H6 H 0 0 N N N -3.331 -7.240 9.520 -3.672 -1.340 -1.601 H222 8YA 39 8YA H262 H7 H 0 0 N N N -5.508 -9.804 7.812 -7.037 -0.204 1.217 H262 8YA 40 8YA H261 H8 H 0 0 N Y N -5.322 -10.460 6.150 -6.990 1.572 1.317 H261 8YA 41 8YA H061 H9 H 0 0 N N N -3.587 1.395 9.061 3.651 0.157 -2.522 H061 8YA 42 8YA H081 H10 H 0 0 N N N -1.959 5.181 8.766 7.611 1.246 -1.932 H081 8YA 43 8YA H111 H11 H 0 0 N N N 2.385 2.691 9.186 6.300 0.778 2.899 H111 8YA 44 8YA H181 H12 H 0 0 N N N -4.255 -3.503 13.108 -0.998 -4.532 -0.301 H181 8YA 45 8YA H232 H13 H 0 0 N N N -5.574 -5.883 7.942 -3.577 1.712 -1.615 H232 8YA 46 8YA H231 H14 H 0 0 N N N -5.753 -7.548 8.591 -4.720 0.675 -2.506 H231 8YA 47 8YA H272 H15 H 0 0 N N N -6.931 -8.263 5.716 -8.869 1.713 -0.295 H272 8YA 48 8YA H271 H16 H 0 0 N Y N -7.501 -9.953 5.923 -8.916 -0.063 -0.395 H271 8YA 49 8YA H282 H17 H 0 0 N N N -8.633 -8.442 7.356 -10.520 0.782 1.186 H282 8YA 50 8YA H281 H18 H 0 0 N N N -7.754 -9.497 8.239 -9.349 -0.078 1.996 H281 8YA 51 8YA H301 H20 H 0 0 N N N -2.287 -7.016 6.862 -3.852 1.564 1.134 H301 8YA 52 8YA H302 H21 H 0 0 N N N -3.403 -6.115 5.779 -5.139 0.449 1.663 H302 8YA 53 8YA H311 H22 H 0 0 N N N -1.922 -4.933 7.605 -3.909 -1.469 0.776 H311 8YA 54 8YA H312 H23 H 0 0 N N N -3.561 -4.354 7.154 -2.820 -0.542 1.837 H312 8YA 55 8YA H331 H24 H 0 0 N N N -1.934 -3.239 7.727 -0.463 1.230 0.063 H331 8YA 56 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8YA O29 C25 DOUB N N 1 8YA C27 C26 SING N N 2 8YA C27 N28 SING N N 3 8YA C25 C26 SING N N 4 8YA C25 N24 SING N N 5 8YA CL C02 SING N N 6 8YA C30 N24 SING N N 7 8YA C30 C31 SING N N 8 8YA N24 C23 SING N N 9 8YA C31 N21 SING N N 10 8YA C23 C22 SING N N 11 8YA C02 C33 DOUB Y N 12 8YA C02 C03 SING Y N 13 8YA C33 C32 SING Y N 14 8YA N08 N07 SING Y N 15 8YA N08 C09 SING Y N 16 8YA N07 C06 DOUB Y N 17 8YA C09 C10 DOUB Y N 18 8YA C09 C05 SING Y N 19 8YA C06 C05 SING Y N 20 8YA C10 C11 SING Y N 21 8YA N21 C22 SING N N 22 8YA N21 C20 SING N N 23 8YA C05 C04 DOUB Y N 24 8YA C11 C12 DOUB Y N 25 8YA C04 C12 SING Y N 26 8YA C04 C03 SING N N 27 8YA C12 C13 SING N N 28 8YA C03 C14 DOUB Y N 29 8YA C32 C20 DOUB Y N 30 8YA C32 C16 SING Y N 31 8YA C20 N19 SING Y N 32 8YA C14 C16 SING Y N 33 8YA C14 F15 SING N N 34 8YA C16 N17 DOUB Y N 35 8YA N19 C18 DOUB Y N 36 8YA N17 C18 SING Y N 37 8YA C10 H101 SING N N 38 8YA C13 H131 SING N N 39 8YA C13 H132 SING N N 40 8YA C13 H133 SING N N 41 8YA C22 H221 SING N N 42 8YA C22 H222 SING N N 43 8YA C26 H262 SING N N 44 8YA C26 H261 SING N N 45 8YA C06 H061 SING N N 46 8YA N08 H081 SING N N 47 8YA C11 H111 SING N N 48 8YA C18 H181 SING N N 49 8YA C23 H232 SING N N 50 8YA C23 H231 SING N N 51 8YA C27 H272 SING N N 52 8YA C27 H271 SING N N 53 8YA N28 H282 SING N N 54 8YA N28 H281 SING N N 55 8YA C30 H301 SING N N 56 8YA C30 H302 SING N N 57 8YA C31 H311 SING N N 58 8YA C31 H312 SING N N 59 8YA C33 H331 SING N N 60 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8YA SMILES ACDLabs 12.01 "c4cc(C)c(c1c(Cl)cc2c(ncnc2c1F)N3CCN(C(CCN)=O)CC3)c5cnnc45" 8YA InChI InChI 1.03 "InChI=1S/C23H23ClFN7O/c1-13-2-3-17-15(11-29-30-17)19(13)20-16(24)10-14-22(21(20)25)27-12-28-23(14)32-8-6-31(7-9-32)18(33)4-5-26/h2-3,10-12H,4-9,26H2,1H3,(H,29,30)" 8YA InChIKey InChI 1.03 VJDYKBMYNVLSKK-UHFFFAOYSA-N 8YA SMILES_CANONICAL CACTVS 3.385 "Cc1ccc2[nH]ncc2c1c3c(Cl)cc4c(ncnc4c3F)N5CCN(CC5)C(=O)CCN" 8YA SMILES CACTVS 3.385 "Cc1ccc2[nH]ncc2c1c3c(Cl)cc4c(ncnc4c3F)N5CCN(CC5)C(=O)CCN" 8YA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1ccc2c(c1c3c(cc4c(c3F)ncnc4N5CCN(CC5)C(=O)CCN)Cl)cn[nH]2" 8YA SMILES "OpenEye OEToolkits" 2.0.6 "Cc1ccc2c(c1c3c(cc4c(c3F)ncnc4N5CCN(CC5)C(=O)CCN)Cl)cn[nH]2" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 8YA "SYSTEMATIC NAME" ACDLabs 12.01 "3-amino-1-{4-[6-chloro-8-fluoro-7-(5-methyl-1H-indazol-4-yl)quinazolin-4-yl]piperazin-1-yl}propan-1-one" 8YA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "3-azanyl-1-[4-[6-chloranyl-8-fluoranyl-7-(5-methyl-1~{H}-indazol-4-yl)quinazolin-4-yl]piperazin-1-yl]propan-1-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8YA "Create component" 2017-03-20 RCSB 8YA "Modify synonyms" 2017-03-21 RCSB 8YA "Initial release" 2017-06-28 RCSB 8YA "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 8YA _pdbx_chem_comp_synonyms.name "KRAS(G12C) inhibitor, aziridine form, bound form" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##