data_8YR # _chem_comp.id 8YR _chem_comp.name "(2S)-2-azanyl-2-[(3R)-oxolan-3-yl]ethanoic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C6 H11 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-11-09 _chem_comp.pdbx_modified_date 2018-07-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 145.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8YR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5YOJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8YR CA C11 C 0 1 N N S 19.821 25.817 16.142 -0.698 0.776 -0.333 CA 8YR 1 8YR N N1 N 0 1 N N N 20.928 25.487 16.975 -0.346 1.564 0.856 N 8YR 2 8YR CB C13 C 0 1 N N R 20.156 25.814 14.655 0.481 -0.119 -0.718 CB 8YR 3 8YR CG2 C15 C 0 1 N N N 18.901 26.011 13.881 1.742 0.733 -0.987 CG2 8YR 4 8YR CG1 C17 C 0 1 N N N 21.033 26.996 14.384 0.883 -1.026 0.466 CG1 8YR 5 8YR C C19 C 0 1 N N N 18.837 24.711 16.486 -1.901 -0.080 -0.031 C 8YR 6 8YR CD2 C21 C 0 1 N N N 19.005 27.432 13.396 2.759 0.242 0.068 CD2 8YR 7 8YR O O6 O 0 1 N N N 18.652 23.766 15.746 -2.195 -0.325 1.115 O 8YR 8 8YR OD1 O7 O 0 1 N N N 20.037 28.076 14.261 2.324 -1.098 0.404 OD1 8YR 9 8YR H8 H8 H 0 1 N N N 19.394 26.791 16.421 -0.929 1.449 -1.159 H8 8YR 10 8YR H9 H9 H 0 1 N N N 20.642 25.507 17.933 -1.084 2.210 1.093 H9 8YR 11 8YR H10 H10 H 0 1 N N N 20.656 24.876 14.371 0.233 -0.720 -1.593 H10 8YR 12 8YR H12 H12 H 0 1 N N N 18.018 25.879 14.524 2.119 0.550 -1.994 H12 8YR 13 8YR H13 H13 H 0 1 N N N 18.847 25.310 13.035 1.525 1.792 -0.848 H13 8YR 14 8YR H16 H16 H 0 1 N N N 21.604 26.868 13.453 0.565 -0.581 1.409 H16 8YR 15 8YR H17 H17 H 0 1 N N N 21.727 27.182 15.217 0.446 -2.018 0.350 H17 8YR 16 8YR H20 H20 H 0 1 N N N 19.318 27.456 12.342 3.763 0.221 -0.354 H20 8YR 17 8YR H21 H21 H 0 1 N N N 18.039 27.946 13.503 2.730 0.883 0.949 H21 8YR 18 8YR OXT OXT O 0 1 N Y N 18.149 24.803 17.788 -2.645 -0.571 -1.034 OXT 8YR 19 8YR HXT HXT H 0 1 N Y N 17.591 24.043 17.906 -3.406 -1.114 -0.791 HXT 8YR 20 8YR H2 H2 H 0 1 N Y N 21.257 24.571 16.744 -0.128 0.963 1.637 H2 8YR 21 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8YR CD2 CG2 SING N N 1 8YR CD2 OD1 SING N N 2 8YR CG2 CB SING N N 3 8YR OD1 CG1 SING N N 4 8YR CG1 CB SING N N 5 8YR CB CA SING N N 6 8YR O C DOUB N N 7 8YR CA C SING N N 8 8YR CA N SING N N 9 8YR CA H8 SING N N 10 8YR N H9 SING N N 11 8YR CB H10 SING N N 12 8YR CG2 H12 SING N N 13 8YR CG2 H13 SING N N 14 8YR CG1 H16 SING N N 15 8YR CG1 H17 SING N N 16 8YR CD2 H20 SING N N 17 8YR CD2 H21 SING N N 18 8YR C OXT SING N N 19 8YR OXT HXT SING N N 20 8YR N H2 SING N N 21 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8YR InChI InChI 1.03 "InChI=1S/C6H11NO3/c7-5(6(8)9)4-1-2-10-3-4/h4-5H,1-3,7H2,(H,8,9)/t4-,5-/m0/s1" 8YR InChIKey InChI 1.03 HAKFKLNJIKJGET-WHFBIAKZSA-N 8YR SMILES_CANONICAL CACTVS 3.385 "N[C@@H]([C@H]1CCOC1)C(O)=O" 8YR SMILES CACTVS 3.385 "N[CH]([CH]1CCOC1)C(O)=O" 8YR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C1COC[C@H]1[C@@H](C(=O)O)N" 8YR SMILES "OpenEye OEToolkits" 2.0.6 "C1COCC1C(C(=O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 8YR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-2-azanyl-2-[(3~{R})-oxolan-3-yl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8YR "Create component" 2017-11-09 PDBJ 8YR "Initial release" 2018-07-11 RCSB #