data_8ZL # _chem_comp.id 8ZL _chem_comp.name "(5S,8R)-N,N-dimethyl-8-[[(2S)-1-[4-(methylamino)-4-oxidanylidene-butanoyl]pyrrolidin-2-yl]carbonylamino]-7,11-bis(oxidanylidene)-10-oxa-3-thia-6-azabicyclo[10.4.0]hexadeca-1(12),13,15-triene-5-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H35 N5 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-11-10 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 561.650 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8ZL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7Q6Q _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8ZL N1 N1 N 0 1 N N N -2.267 1.455 -23.859 3.685 1.892 0.336 N1 8ZL 1 8ZL C7 C1 C 0 1 N N N -1.337 -0.451 -24.857 2.496 3.840 1.162 C7 8ZL 2 8ZL C8 C2 C 0 1 N N S -2.153 0.802 -25.173 2.529 2.297 1.150 C8 8ZL 3 8ZL N2 N2 N 0 1 N N N -3.368 1.050 -27.247 0.071 2.027 1.115 N2 8ZL 4 8ZL C9 C3 C 0 1 N N N -3.388 0.510 -26.019 1.260 1.762 0.539 C9 8ZL 5 8ZL O1 O1 O 0 1 N N N -4.368 2.291 -24.013 3.442 -0.301 0.568 O1 8ZL 6 8ZL C1 C4 C 0 1 N N N -3.669 5.646 -23.300 6.717 -1.429 -1.716 C1 8ZL 7 8ZL O5 O2 O 0 1 N N N -6.744 1.577 -28.480 -2.148 -0.107 1.946 O5 8ZL 8 8ZL C5 C5 C 0 1 N N N -1.058 1.188 -23.054 4.355 3.103 -0.170 C5 8ZL 9 8ZL C6 C6 C 0 1 N N N -0.332 0.068 -23.838 3.961 4.221 0.828 C6 8ZL 10 8ZL N3 N3 N 0 1 N N N -5.746 2.133 -26.534 -0.762 -0.930 0.388 N3 8ZL 11 8ZL C4 C7 C 0 1 N N N -3.257 2.344 -23.512 4.071 0.623 0.098 C4 8ZL 12 8ZL O4 O3 O 0 1 N N N -2.984 2.906 -31.615 -2.688 0.139 -0.372 O4 8ZL 13 8ZL C3 C8 C 0 1 N N N -3.017 3.326 -22.384 5.285 0.352 -0.753 C3 8ZL 14 8ZL O3 O4 O 0 1 N N N -3.987 2.853 -29.600 -3.447 2.189 -0.007 O3 8ZL 15 8ZL C2 C9 C 0 1 N N N -2.543 4.687 -22.937 5.503 -1.158 -0.865 C2 8ZL 16 8ZL N4 N4 N 0 1 N N N -7.349 1.422 -24.173 -0.649 -1.765 3.334 N4 8ZL 17 8ZL O6 O5 O 0 1 N N N -7.502 3.634 -23.877 -2.667 -2.380 2.650 O6 8ZL 18 8ZL C23 C10 C 0 1 N N N -7.224 2.699 -24.609 -1.511 -2.144 2.370 C23 8ZL 19 8ZL C25 C11 C 0 1 N N N -7.298 1.207 -22.732 -1.108 -1.639 4.720 C25 8ZL 20 8ZL C24 C12 C 0 1 N N N -7.404 0.172 -24.924 0.748 -1.480 2.997 C24 8ZL 21 8ZL C21 C13 C 0 1 N N S -6.828 2.986 -26.069 -1.038 -2.275 0.945 C21 8ZL 22 8ZL C20 C14 C 0 1 N N N -6.401 4.454 -26.180 -2.128 -2.939 0.102 C20 8ZL 23 8ZL S S1 S 0 1 N N N -6.185 5.087 -27.863 -3.522 -1.796 -0.098 S 8ZL 24 8ZL C19 C15 C 0 1 N N N -4.389 4.977 -28.115 -3.628 -1.594 -1.898 C19 8ZL 25 8ZL C18 C16 C 0 1 Y N N -3.931 5.667 -29.376 -4.647 -0.533 -2.226 C18 8ZL 26 8ZL C17 C17 C 0 1 Y N N -3.968 7.065 -29.394 -5.640 -0.790 -3.148 C17 8ZL 27 8ZL C16 C18 C 0 1 Y N N -3.701 7.770 -30.559 -6.577 0.183 -3.449 C16 8ZL 28 8ZL C15 C19 C 0 1 Y N N -3.357 7.094 -31.717 -6.526 1.417 -2.826 C15 8ZL 29 8ZL C14 C20 C 0 1 Y N N -3.276 5.706 -31.722 -5.537 1.689 -1.904 C14 8ZL 30 8ZL C13 C21 C 0 1 Y N N -3.565 4.975 -30.561 -4.585 0.713 -1.599 C13 8ZL 31 8ZL C12 C22 C 0 1 N N N -3.471 3.481 -30.667 -3.514 0.994 -0.622 C12 8ZL 32 8ZL C11 C23 C 0 1 N N N -4.004 1.405 -29.595 -2.340 2.397 0.929 C11 8ZL 33 8ZL C22 C24 C 0 1 N N N -5.756 1.569 -27.748 -1.402 0.103 1.013 C22 8ZL 34 8ZL C10 C25 C 0 1 N N R -4.447 0.928 -28.218 -1.163 1.507 0.521 C10 8ZL 35 8ZL O2 O6 O 0 1 N N N -4.326 -0.149 -25.570 1.308 1.093 -0.472 O2 8ZL 36 8ZL O O7 O 0 1 N N N -3.497 6.510 -24.156 7.346 -0.505 -2.187 O 8ZL 37 8ZL N N5 N 0 1 N N N -4.808 5.547 -22.617 7.103 -2.698 -1.955 N 8ZL 38 8ZL C C26 C 0 1 N N N -5.930 6.453 -22.820 8.284 -2.961 -2.782 C 8ZL 39 8ZL H1 H1 H 0 1 N N N -1.970 -1.241 -24.426 1.816 4.218 0.399 H1 8ZL 40 8ZL H2 H2 H 0 1 N N N -0.832 -0.835 -25.755 2.215 4.214 2.146 H2 8ZL 41 8ZL H3 H3 H 0 1 N N N -1.504 1.441 -25.790 2.641 1.920 2.166 H3 8ZL 42 8ZL H4 H4 H 0 1 N N N -2.558 1.572 -27.514 0.032 2.562 1.923 H4 8ZL 43 8ZL H5 H5 H 0 1 N N N -0.429 2.087 -22.982 5.436 2.964 -0.177 H5 8ZL 44 8ZL H6 H6 H 0 1 N N N -1.328 0.847 -22.043 3.997 3.344 -1.172 H6 8ZL 45 8ZL H7 H7 H 0 1 N N N -0.027 -0.740 -23.156 4.012 5.201 0.355 H7 8ZL 46 8ZL H8 H8 H 0 1 N N N 0.555 0.472 -24.348 4.587 4.186 1.720 H8 8ZL 47 8ZL H9 H9 H 0 1 N N N -4.970 1.962 -25.927 -0.166 -0.793 -0.364 H9 8ZL 48 8ZL H10 H10 H 0 1 N N N -3.953 3.470 -21.825 5.133 0.772 -1.747 H10 8ZL 49 8ZL H11 H11 H 0 1 N N N -2.247 2.922 -21.711 6.161 0.812 -0.294 H11 8ZL 50 8ZL H12 H12 H 0 1 N N N -1.945 4.501 -23.841 4.628 -1.618 -1.324 H12 8ZL 51 8ZL H13 H13 H 0 1 N N N -1.914 5.168 -22.174 5.655 -1.578 0.129 H13 8ZL 52 8ZL H14 H14 H 0 1 N N N -7.258 2.178 -22.217 -0.980 -2.591 5.234 H14 8ZL 53 8ZL H15 H15 H 0 1 N N N -8.196 0.659 -22.411 -0.524 -0.871 5.227 H15 8ZL 54 8ZL H16 H16 H 0 1 N N N -6.402 0.621 -22.480 -2.162 -1.359 4.729 H16 8ZL 55 8ZL H17 H17 H 0 1 N N N -7.510 -0.671 -24.226 1.337 -2.394 3.084 H17 8ZL 56 8ZL H18 H18 H 0 1 N N N -8.266 0.193 -25.607 0.806 -1.107 1.975 H18 8ZL 57 8ZL H19 H19 H 0 1 N N N -6.478 0.053 -25.505 1.141 -0.729 3.682 H19 8ZL 58 8ZL H20 H20 H 0 1 N N N -7.713 2.833 -26.704 -0.130 -2.877 0.915 H20 8ZL 59 8ZL H21 H21 H 0 1 N N N -5.443 4.568 -25.651 -1.724 -3.194 -0.878 H21 8ZL 60 8ZL H22 H22 H 0 1 N N N -7.168 5.067 -25.685 -2.471 -3.846 0.600 H22 8ZL 61 8ZL H23 H23 H 0 1 N N N -4.107 3.915 -28.173 -2.655 -1.296 -2.288 H23 8ZL 62 8ZL H24 H24 H 0 1 N N N -3.885 5.444 -27.256 -3.928 -2.538 -2.352 H24 8ZL 63 8ZL H25 H25 H 0 1 N N N -4.208 7.603 -28.489 -5.687 -1.752 -3.637 H25 8ZL 64 8ZL H26 H26 H 0 1 N N N -3.762 8.848 -30.562 -7.352 -0.023 -4.173 H26 8ZL 65 8ZL H27 H27 H 0 1 N N N -3.151 7.648 -32.621 -7.263 2.170 -3.063 H27 8ZL 66 8ZL H28 H28 H 0 1 N N N -2.989 5.188 -32.625 -5.498 2.653 -1.419 H28 8ZL 67 8ZL H29 H29 H 0 1 N N N -4.708 1.040 -30.358 -2.033 3.442 0.902 H29 8ZL 68 8ZL H30 H30 H 0 1 N N N -2.996 1.022 -29.813 -2.663 2.138 1.937 H30 8ZL 69 8ZL H31 H31 H 0 1 N N N -4.658 -0.146 -28.323 -1.071 1.503 -0.565 H31 8ZL 70 8ZL H32 H32 H 0 1 N N N -4.897 4.820 -21.936 6.600 -3.437 -1.579 H32 8ZL 71 8ZL H33 H33 H 0 1 N N N -6.753 6.175 -22.146 8.439 -4.037 -2.862 H33 8ZL 72 8ZL H34 H34 H 0 1 N N N -5.612 7.484 -22.604 8.131 -2.541 -3.776 H34 8ZL 73 8ZL H35 H35 H 0 1 N N N -6.272 6.385 -23.863 9.159 -2.501 -2.323 H35 8ZL 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8ZL C14 C15 DOUB Y N 1 8ZL C14 C13 SING Y N 2 8ZL C15 C16 SING Y N 3 8ZL O4 C12 DOUB N N 4 8ZL C12 C13 SING N N 5 8ZL C12 O3 SING N N 6 8ZL C13 C18 DOUB Y N 7 8ZL C16 C17 DOUB Y N 8 8ZL O3 C11 SING N N 9 8ZL C11 C10 SING N N 10 8ZL C17 C18 SING Y N 11 8ZL C18 C19 SING N N 12 8ZL O5 C22 DOUB N N 13 8ZL C10 C22 SING N N 14 8ZL C10 N2 SING N N 15 8ZL C19 S SING N N 16 8ZL S C20 SING N N 17 8ZL C22 N3 SING N N 18 8ZL N2 C9 SING N N 19 8ZL N3 C21 SING N N 20 8ZL C20 C21 SING N N 21 8ZL C21 C23 SING N N 22 8ZL C9 O2 DOUB N N 23 8ZL C9 C8 SING N N 24 8ZL C8 C7 SING N N 25 8ZL C8 N1 SING N N 26 8ZL C24 N4 SING N N 27 8ZL C7 C6 SING N N 28 8ZL C23 N4 SING N N 29 8ZL C23 O6 DOUB N N 30 8ZL N4 C25 SING N N 31 8ZL O C1 DOUB N N 32 8ZL O1 C4 DOUB N N 33 8ZL N1 C4 SING N N 34 8ZL N1 C5 SING N N 35 8ZL C6 C5 SING N N 36 8ZL C4 C3 SING N N 37 8ZL C1 C2 SING N N 38 8ZL C1 N SING N N 39 8ZL C2 C3 SING N N 40 8ZL C N SING N N 41 8ZL C7 H1 SING N N 42 8ZL C7 H2 SING N N 43 8ZL C8 H3 SING N N 44 8ZL N2 H4 SING N N 45 8ZL C5 H5 SING N N 46 8ZL C5 H6 SING N N 47 8ZL C6 H7 SING N N 48 8ZL C6 H8 SING N N 49 8ZL N3 H9 SING N N 50 8ZL C3 H10 SING N N 51 8ZL C3 H11 SING N N 52 8ZL C2 H12 SING N N 53 8ZL C2 H13 SING N N 54 8ZL C25 H14 SING N N 55 8ZL C25 H15 SING N N 56 8ZL C25 H16 SING N N 57 8ZL C24 H17 SING N N 58 8ZL C24 H18 SING N N 59 8ZL C24 H19 SING N N 60 8ZL C21 H20 SING N N 61 8ZL C20 H21 SING N N 62 8ZL C20 H22 SING N N 63 8ZL C19 H23 SING N N 64 8ZL C19 H24 SING N N 65 8ZL C17 H25 SING N N 66 8ZL C16 H26 SING N N 67 8ZL C15 H27 SING N N 68 8ZL C14 H28 SING N N 69 8ZL C11 H29 SING N N 70 8ZL C11 H30 SING N N 71 8ZL C10 H31 SING N N 72 8ZL N H32 SING N N 73 8ZL C H33 SING N N 74 8ZL C H34 SING N N 75 8ZL C H35 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8ZL InChI InChI 1.06 "InChI=1S/C26H35N5O7S/c1-27-21(32)10-11-22(33)31-12-6-9-20(31)24(35)28-18-13-38-26(37)17-8-5-4-7-16(17)14-39-15-19(29-23(18)34)25(36)30(2)3/h4-5,7-8,18-20H,6,9-15H2,1-3H3,(H,27,32)(H,28,35)(H,29,34)/t18-,19-,20+/m1/s1" 8ZL InChIKey InChI 1.06 DXVZHGSXTJTODF-AQNXPRMDSA-N 8ZL SMILES_CANONICAL CACTVS 3.385 "CNC(=O)CCC(=O)N1CCC[C@H]1C(=O)N[C@@H]2COC(=O)c3ccccc3CSC[C@@H](NC2=O)C(=O)N(C)C" 8ZL SMILES CACTVS 3.385 "CNC(=O)CCC(=O)N1CCC[CH]1C(=O)N[CH]2COC(=O)c3ccccc3CSC[CH](NC2=O)C(=O)N(C)C" 8ZL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CNC(=O)CCC(=O)N1CCC[C@H]1C(=O)N[C@@H]2COC(=O)c3ccccc3CSC[C@@H](NC2=O)C(=O)N(C)C" 8ZL SMILES "OpenEye OEToolkits" 2.0.7 "CNC(=O)CCC(=O)N1CCCC1C(=O)NC2COC(=O)c3ccccc3CSCC(NC2=O)C(=O)N(C)C" # _pdbx_chem_comp_identifier.comp_id 8ZL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{S},8~{R})-~{N},~{N}-dimethyl-8-[[(2~{S})-1-[4-(methylamino)-4-oxidanylidene-butanoyl]pyrrolidin-2-yl]carbonylamino]-7,11-bis(oxidanylidene)-10-oxa-3-thia-6-azabicyclo[10.4.0]hexadeca-1(12),13,15-triene-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8ZL "Create component" 2021-11-10 PDBE 8ZL "Initial release" 2022-03-16 RCSB 8ZL "Modify descriptor" 2022-08-22 RCSB #