data_909 # _chem_comp.id 909 _chem_comp.name "N-[4-[4-ethanoyl-5-methyl-2-[6-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-pyrrol-3-yl]phenyl]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H30 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-06 _chem_comp.pdbx_modified_date 2022-04-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 470.566 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 909 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EIL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 909 C1 C1 C 0 1 Y N N 4.799 9.021 -0.059 -2.110 -1.112 -0.526 C1 909 1 909 C11 C2 C 0 1 N N N 1.113 5.928 -3.143 -7.610 -0.878 -0.812 C11 909 2 909 C12 C3 C 0 1 N N N 1.774 7.268 -3.450 -6.091 -1.020 -0.684 C12 909 3 909 C13 C4 C 0 1 N N N -0.689 4.801 -2.049 -7.936 -1.064 1.581 C13 909 4 909 C15 C5 C 0 1 Y N N 7.565 7.078 -0.858 0.241 1.533 -0.113 C15 909 5 909 C17 C6 C 0 1 Y N N 8.961 6.586 -0.886 1.572 2.139 0.014 C17 909 6 909 C18 C7 C 0 1 Y N N 10.118 7.154 -0.150 2.779 1.461 -0.015 C18 909 7 909 C19 C8 C 0 1 Y N N 11.182 6.247 -0.661 3.820 2.488 0.149 C19 909 8 909 C2 C9 C 0 1 Y N N 5.832 8.196 -0.454 -1.330 0.038 -0.356 C2 909 9 909 C20 C10 C 0 1 Y N N 10.544 5.289 -1.628 3.156 3.695 0.264 C20 909 10 909 C22 C11 C 0 1 N N N 11.198 4.184 -2.409 3.812 5.040 0.449 C22 909 11 909 C23 C12 C 0 1 N N N 12.647 6.249 -0.328 5.268 2.274 0.184 C23 909 12 909 C24 C13 C 0 1 N N N 13.261 7.470 0.296 6.072 2.353 -1.087 C24 909 13 909 C25 C14 C 0 1 Y N N 10.186 8.279 0.836 2.980 0.004 -0.178 C25 909 14 909 C26 C15 C 0 1 Y N N 9.905 9.587 0.452 3.529 -0.747 0.863 C26 909 15 909 C27 C16 C 0 1 Y N N 9.982 10.615 1.386 3.715 -2.103 0.708 C27 909 16 909 C28 C17 C 0 1 Y N N 10.333 10.353 2.705 3.356 -2.724 -0.483 C28 909 17 909 C29 C18 C 0 1 Y N N 10.631 9.048 3.083 2.809 -1.979 -1.521 C29 909 18 909 C3 C19 C 0 1 Y N N 5.540 7.185 -1.497 -1.960 1.290 -0.234 C3 909 19 909 C30 C20 C 0 1 Y N N 10.549 8.015 2.155 2.615 -0.623 -1.370 C30 909 20 909 C32 C21 C 0 1 N N N 9.959 11.409 4.832 3.414 -4.922 0.424 C32 909 21 909 C34 C22 C 0 1 N N N 10.175 12.718 5.543 3.735 -6.388 0.286 C34 909 22 909 C4 C23 C 0 1 Y N N 4.261 7.088 -2.025 -3.343 1.376 -0.283 C4 909 23 909 C5 C24 C 0 1 Y N N 3.261 7.946 -1.585 -4.097 0.226 -0.451 C5 909 24 909 C6 C25 C 0 1 Y N N 3.523 8.898 -0.603 -3.470 -1.013 -0.577 C6 909 25 909 C8 C26 C 0 1 N N N 0.806 8.184 -1.350 -6.023 0.961 0.704 C8 909 26 909 C9 C27 C 0 1 N N N 0.167 6.824 -1.091 -7.541 1.104 0.577 C9 909 27 909 N10 N1 N 0 1 N N N -0.114 6.120 -2.354 -8.141 -0.225 0.393 N10 909 28 909 N14 N2 N 0 1 Y N N 6.688 6.527 -1.713 -0.948 2.219 -0.082 N14 909 29 909 N16 N3 N 0 1 Y N N 7.129 8.087 -0.106 0.006 0.250 -0.275 N16 909 30 909 N21 N4 N 0 1 Y N N 9.231 5.571 -1.708 1.834 3.479 0.178 N21 909 31 909 N31 N5 N 0 1 N N N 10.410 11.394 3.576 3.547 -4.101 -0.637 N31 909 32 909 N7 N6 N 0 1 N N N 1.976 7.821 -2.125 -5.491 0.308 -0.500 N7 909 33 909 O33 O1 O 0 1 N N N 9.419 10.459 5.383 3.036 -4.482 1.489 O33 909 34 909 O35 O2 O 0 1 N N N 13.343 5.287 -0.600 5.820 2.033 1.238 O35 909 35 909 H1 H1 H 0 1 N N N 4.984 9.779 0.688 -1.634 -2.077 -0.620 H1 909 36 909 H2 H2 H 0 1 N N N 0.859 5.426 -4.088 -7.846 -0.273 -1.687 H2 909 37 909 H3 H3 H 0 1 N N N 1.815 5.302 -2.572 -8.060 -1.865 -0.919 H3 909 38 909 H4 H4 H 0 1 N N N 2.731 7.130 -3.975 -5.856 -1.648 0.176 H4 909 39 909 H5 H5 H 0 1 N N N 1.114 7.909 -4.053 -5.692 -1.478 -1.589 H5 909 40 909 H6 H6 H 0 1 N N N -1.608 4.929 -1.459 -6.869 -1.241 1.721 H6 909 41 909 H7 H7 H 0 1 N N N -0.926 4.278 -2.988 -8.338 -0.558 2.458 H7 909 42 909 H8 H8 H 0 1 N N N 0.037 4.209 -1.473 -8.447 -2.018 1.446 H8 909 43 909 H9 H9 H 0 1 N N N 11.546 4.575 -3.377 4.068 5.457 -0.525 H9 909 44 909 H10 H10 H 0 1 N N N 12.055 3.792 -1.842 3.124 5.711 0.963 H10 909 45 909 H11 H11 H 0 1 N N N 10.471 3.376 -2.580 4.718 4.923 1.044 H11 909 46 909 H12 H12 H 0 1 N N N 14.341 7.310 0.430 6.476 3.360 -1.200 H12 909 47 909 H13 H13 H 0 1 N N N 13.098 8.338 -0.360 6.892 1.636 -1.044 H13 909 48 909 H14 H14 H 0 1 N N N 12.794 7.656 1.274 5.431 2.122 -1.938 H14 909 49 909 H15 H15 H 0 1 N N N 9.628 9.803 -0.569 3.809 -0.265 1.788 H15 909 50 909 H16 H16 H 0 1 N N N 9.766 11.629 1.083 4.140 -2.685 1.513 H16 909 51 909 H17 H17 H 0 1 N N N 10.927 8.836 4.100 2.532 -2.465 -2.445 H17 909 52 909 H18 H18 H 0 1 N N N 10.768 7.002 2.459 2.185 -0.046 -2.175 H18 909 53 909 H19 H19 H 0 1 N N N 9.782 12.648 6.568 3.569 -6.888 1.241 H19 909 54 909 H20 H20 H 0 1 N N N 11.251 12.943 5.578 3.090 -6.832 -0.473 H20 909 55 909 H21 H21 H 0 1 N N N 9.650 13.520 5.003 4.778 -6.506 -0.009 H21 909 56 909 H22 H22 H 0 1 N N N 4.043 6.345 -2.778 -3.831 2.335 -0.186 H22 909 57 909 H23 H23 H 0 1 N N N 2.730 9.546 -0.260 -4.067 -1.903 -0.708 H23 909 58 909 H24 H24 H 0 1 N N N 1.087 8.680 -0.409 -5.573 1.948 0.812 H24 909 59 909 H25 H25 H 0 1 N N N 0.134 8.839 -1.923 -5.787 0.357 1.580 H25 909 60 909 H26 H26 H 0 1 N N N -0.776 6.969 -0.543 -7.941 1.561 1.481 H26 909 61 909 H27 H27 H 0 1 N N N 0.853 6.214 -0.485 -7.777 1.731 -0.283 H27 909 62 909 H29 H29 H 0 1 N N N 6.855 5.789 -2.367 -1.057 3.177 0.028 H29 909 63 909 H31 H31 H 0 1 N N N 8.567 5.098 -2.288 1.157 4.171 0.230 H31 909 64 909 H32 H32 H 0 1 N N N 10.847 12.230 3.243 3.774 -4.465 -1.507 H32 909 65 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 909 C12 C11 SING N N 1 909 C12 N7 SING N N 2 909 C11 N10 SING N N 3 909 C22 C20 SING N N 4 909 N10 C13 SING N N 5 909 N10 C9 SING N N 6 909 N7 C5 SING N N 7 909 N7 C8 SING N N 8 909 C4 C5 DOUB Y N 9 909 C4 C3 SING Y N 10 909 N14 C3 SING Y N 11 909 N14 C15 SING Y N 12 909 N21 C20 SING Y N 13 909 N21 C17 SING Y N 14 909 C20 C19 DOUB Y N 15 909 C5 C6 SING Y N 16 909 C3 C2 DOUB Y N 17 909 C8 C9 SING N N 18 909 C17 C15 SING N N 19 909 C17 C18 DOUB Y N 20 909 C15 N16 DOUB Y N 21 909 C19 C23 SING N N 22 909 C19 C18 SING Y N 23 909 C6 C1 DOUB Y N 24 909 O35 C23 DOUB N N 25 909 C2 N16 SING Y N 26 909 C2 C1 SING Y N 27 909 C23 C24 SING N N 28 909 C18 C25 SING N N 29 909 C26 C25 DOUB Y N 30 909 C26 C27 SING Y N 31 909 C25 C30 SING Y N 32 909 C27 C28 DOUB Y N 33 909 C30 C29 DOUB Y N 34 909 C28 C29 SING Y N 35 909 C28 N31 SING N N 36 909 N31 C32 SING N N 37 909 C32 O33 DOUB N N 38 909 C32 C34 SING N N 39 909 C1 H1 SING N N 40 909 C11 H2 SING N N 41 909 C11 H3 SING N N 42 909 C12 H4 SING N N 43 909 C12 H5 SING N N 44 909 C13 H6 SING N N 45 909 C13 H7 SING N N 46 909 C13 H8 SING N N 47 909 C22 H9 SING N N 48 909 C22 H10 SING N N 49 909 C22 H11 SING N N 50 909 C24 H12 SING N N 51 909 C24 H13 SING N N 52 909 C24 H14 SING N N 53 909 C26 H15 SING N N 54 909 C27 H16 SING N N 55 909 C29 H17 SING N N 56 909 C30 H18 SING N N 57 909 C34 H19 SING N N 58 909 C34 H20 SING N N 59 909 C34 H21 SING N N 60 909 C4 H22 SING N N 61 909 C6 H23 SING N N 62 909 C8 H24 SING N N 63 909 C8 H25 SING N N 64 909 C9 H26 SING N N 65 909 C9 H27 SING N N 66 909 N14 H29 SING N N 67 909 N21 H31 SING N N 68 909 N31 H32 SING N N 69 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 909 InChI InChI 1.03 "InChI=1S/C27H30N6O2/c1-16-24(17(2)34)25(19-5-7-20(8-6-19)29-18(3)35)26(28-16)27-30-22-10-9-21(15-23(22)31-27)33-13-11-32(4)12-14-33/h5-10,15,28H,11-14H2,1-4H3,(H,29,35)(H,30,31)" 909 InChIKey InChI 1.03 LLOIMHBHMFEZKV-UHFFFAOYSA-N 909 SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)c2ccc3nc([nH]c3c2)c4[nH]c(C)c(C(C)=O)c4c5ccc(NC(C)=O)cc5" 909 SMILES CACTVS 3.385 "CN1CCN(CC1)c2ccc3nc([nH]c3c2)c4[nH]c(C)c(C(C)=O)c4c5ccc(NC(C)=O)cc5" 909 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c([nH]1)c2[nH]c3cc(ccc3n2)N4CCN(CC4)C)c5ccc(cc5)NC(=O)C)C(=O)C" 909 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c([nH]1)c2[nH]c3cc(ccc3n2)N4CCN(CC4)C)c5ccc(cc5)NC(=O)C)C(=O)C" # _pdbx_chem_comp_identifier.comp_id 909 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[4-[4-ethanoyl-5-methyl-2-[6-(4-methylpiperazin-1-yl)-1~{H}-benzimidazol-2-yl]-1~{H}-pyrrol-3-yl]phenyl]ethanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 909 "Create component" 2021-04-06 PDBJ 909 "Initial release" 2022-04-06 RCSB ##