data_90H # _chem_comp.id 90H _chem_comp.name "(1R,2S,5S)-N-{(2S,3R)-3-hydroxy-4-(methylamino)-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H38 F3 N5 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-04 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 561.594 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 90H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7SF3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 90H N1 N1 N 0 1 N N N N N N 19.671 16.017 27.324 -1.090 1.092 -0.238 N1 90H 1 90H N3 N2 N 0 1 N N N N N N 18.137 13.723 25.095 2.538 0.650 -0.771 N3 90H 2 90H C4 C1 C 0 1 N N S N N N 20.798 17.418 25.796 -0.691 3.453 -0.237 C4 90H 3 90H C5 C2 C 0 1 N N N N N N 19.609 18.207 25.333 -1.134 3.477 -1.704 C5 90H 4 90H C6 C3 C 0 1 N N N N N N 18.673 18.848 26.345 -2.300 2.571 -2.104 C6 90H 5 90H C7 C4 C 0 1 N N N N N N 19.803 19.035 24.073 -1.056 4.815 -2.442 C7 90H 6 90H C8 C5 C 0 1 N N N N N N 20.805 16.955 27.226 -1.166 2.279 0.646 C8 90H 7 90H C10 C6 C 0 1 N N S N N N 19.969 15.611 29.708 -3.125 -0.012 0.632 C10 90H 8 90H C13 C7 C 0 1 N N N N N N 21.524 13.762 29.178 -2.251 -2.183 1.506 C13 90H 9 90H C15 C8 C 0 1 N N N N N N 19.477 17.500 31.161 -5.504 -0.480 0.386 C15 90H 10 90H C17 C9 C 0 1 N N S N N N 18.129 12.380 24.511 3.701 0.282 0.039 C17 90H 11 90H C20 C10 C 0 1 N N N N N N 19.729 10.422 20.440 7.742 0.095 1.804 C20 90H 12 90H C21 C11 C 0 1 N N N N N N 17.071 11.542 25.238 4.600 -0.664 -0.760 C21 90H 13 90H C22 C12 C 0 1 N N S N N N 17.414 11.320 26.710 3.831 -1.946 -1.084 C22 90H 14 90H C24 C13 C 0 1 N N N N N N 18.387 9.739 28.261 3.630 -4.177 -0.229 C24 90H 15 90H O1 O1 O 0 1 N N N N N N 20.297 13.786 25.784 1.256 0.836 1.031 O1 90H 16 90H C1 C14 C 0 1 N N N N N N 19.212 14.323 25.620 1.356 0.909 -0.176 C1 90H 17 90H C2 C15 C 0 1 N N S N N N 19.003 15.764 26.050 0.160 1.288 -1.009 C2 90H 18 90H C3 C16 C 0 1 N N R N N N 19.662 16.714 25.073 0.185 2.798 -1.332 C3 90H 19 90H C9 C17 C 0 1 N N N N N N 19.187 15.427 28.424 -1.959 0.065 -0.319 C9 90H 20 90H C11 C18 C 0 1 N N N N N N 20.592 14.326 30.249 -2.709 -0.775 1.891 C11 90H 21 90H C12 C19 C 0 1 N N N N N N 19.560 13.263 30.626 -1.559 -0.035 2.578 C12 90H 22 90H C14 C20 C 0 1 N N N N N N 21.416 14.667 31.505 -3.899 -0.869 2.847 C14 90H 23 90H N2 N3 N 0 1 N N N N N N 19.140 16.306 30.668 -4.238 -0.710 -0.016 N2 90H 24 90H C16 C21 C 0 1 N N N N N N 18.451 18.126 32.104 -6.649 -1.199 -0.281 C16 90H 25 90H F1 F1 F 0 1 N N N N N N 18.767 17.934 33.364 -7.855 -0.798 0.304 F1 90H 26 90H F2 F2 F 0 1 N N N N N N 18.305 19.420 31.906 -6.665 -0.886 -1.645 F2 90H 27 90H F3 F3 F 0 1 N N N N N N 17.263 17.603 31.930 -6.489 -2.580 -0.122 F3 90H 28 90H O2 O2 O 0 1 N N N N N N 20.495 18.117 30.891 -5.722 0.305 1.284 O2 90H 29 90H O3 O3 O 0 1 N N N N N N 18.146 14.771 28.378 -1.801 -0.799 -1.156 O3 90H 30 90H C18 C22 C 0 1 N N R N N N 17.908 12.543 22.984 4.486 1.542 0.408 C18 90H 31 90H O4 O4 O 0 1 N N N N N N 18.842 13.512 22.546 3.614 2.476 1.047 O4 90H 32 90H C19 C23 C 0 1 N N N N N N 18.266 11.301 22.198 5.608 1.178 1.347 C19 90H 33 90H N4 N4 N 0 1 N N N N N N 19.237 11.466 21.309 6.703 0.550 0.877 N4 90H 34 90H O5 O5 O 0 1 N N N N N N 17.661 10.264 22.393 5.524 1.451 2.526 O5 90H 35 90H C23 C24 C 0 1 N N N N N N 18.700 10.558 27.015 3.473 -2.706 0.214 C23 90H 36 90H N5 N5 N 0 1 N N N N N N 16.942 9.586 28.180 4.582 -4.151 -1.345 N5 90H 37 90H C25 C25 C 0 1 N N N N N N 16.351 10.532 27.445 4.710 -2.911 -1.849 C25 90H 38 90H O6 O6 O 0 1 N N N N N N 15.153 10.759 27.388 5.426 -2.611 -2.780 O6 90H 39 90H H1 H1 H 0 1 N N N N N N 17.275 14.230 25.102 2.618 0.709 -1.736 H1 90H 40 90H H2 H2 H 0 1 N N N N N N 21.757 17.543 25.273 -0.392 4.373 0.264 H2 90H 41 90H H3 H3 H 0 1 N N N N N N 18.582 18.195 27.226 -3.166 3.182 -2.355 H3 90H 42 90H H4 H4 H 0 1 N N N N N N 19.078 19.823 26.652 -2.015 1.972 -2.970 H4 90H 43 90H H5 H5 H 0 1 N N N N N N 17.682 18.990 25.889 -2.549 1.911 -1.273 H5 90H 44 90H H6 H6 H 0 1 N N N N N N 19.755 20.105 24.325 -0.537 5.544 -1.820 H6 90H 45 90H H7 H7 H 0 1 N N N N N N 20.784 18.807 23.632 -0.513 4.683 -3.378 H7 90H 46 90H H8 H8 H 0 1 N N N N N N 19.011 18.793 23.350 -2.064 5.172 -2.655 H8 90H 47 90H H9 H9 H 0 1 N N N N N N 21.751 16.446 27.464 -2.191 2.442 0.976 H9 90H 48 90H H10 H10 H 0 1 N N N N N N 20.665 17.805 27.909 -0.504 2.156 1.503 H10 90H 49 90H H11 H11 H 0 1 N N N N N N 20.809 16.278 29.464 -3.439 0.996 0.904 H11 90H 50 90H H12 H12 H 0 1 N N N N N N 21.986 12.834 29.545 -1.403 -2.115 0.824 H12 90H 51 90H H13 H13 H 0 1 N N N N N N 20.947 13.549 28.266 -1.954 -2.726 2.403 H13 90H 52 90H H14 H14 H 0 1 N N N N N N 22.310 14.498 28.951 -3.069 -2.710 1.016 H14 90H 53 90H H15 H15 H 0 1 N N N N N N 19.111 11.910 24.667 3.367 -0.217 0.949 H15 90H 54 90H H16 H16 H 0 1 N N N N N N 20.532 10.822 19.803 8.142 0.951 2.349 H16 90H 55 90H H17 H17 H 0 1 N N N N N N 20.122 9.594 21.048 7.313 -0.616 2.510 H17 90H 56 90H H18 H18 H 0 1 N N N N N N 18.908 10.055 19.807 8.543 -0.386 1.244 H18 90H 57 90H H19 H19 H 0 1 N N N N N N 16.104 12.062 25.175 4.905 -0.178 -1.687 H19 90H 58 90H H20 H20 H 0 1 N N N N N N 16.994 10.563 24.742 5.484 -0.909 -0.171 H20 90H 59 90H H21 H21 H 0 1 N N N N N N 17.490 12.308 27.187 2.930 -1.716 -1.653 H21 90H 60 90H H22 H22 H 0 1 N N N N N N 18.893 8.763 28.233 4.026 -4.778 0.591 H22 90H 61 90H H23 H23 H 0 1 N N N N N N 18.680 10.277 29.175 2.671 -4.576 -0.558 H23 90H 62 90H H24 H24 H 0 1 N N N N N N 17.927 15.983 26.122 0.136 0.702 -1.928 H24 90H 63 90H H25 H25 H 0 1 N N N N N N 19.834 16.369 24.043 1.128 3.241 -1.655 H25 90H 64 90H H26 H26 H 0 1 N N N N N N 18.886 13.663 31.397 -1.895 0.958 2.878 H26 90H 65 90H H27 H27 H 0 1 N N N N N N 18.976 12.987 29.736 -1.243 -0.593 3.459 H27 90H 66 90H H28 H28 H 0 1 N N N N N N 20.076 12.373 31.016 -0.722 0.058 1.887 H28 90H 67 90H H29 H29 H 0 1 N N N N N N 20.751 15.074 32.281 -4.718 -1.396 2.358 H29 90H 68 90H H30 H30 H 0 1 N N N N N N 21.904 13.756 31.881 -3.602 -1.412 3.744 H30 90H 69 90H H31 H31 H 0 1 N N N N N N 22.181 15.414 31.249 -4.225 0.134 3.122 H31 90H 70 90H H32 H32 H 0 1 N N N N N N 18.288 15.879 30.972 -4.064 -1.338 -0.735 H32 90H 71 90H H33 H33 H 0 1 N N N N N N 16.870 12.845 22.781 4.899 1.990 -0.495 H33 90H 72 90H H34 H34 H 0 1 N N N N N N 18.683 14.332 22.998 2.867 2.755 0.500 H34 90H 73 90H H35 H35 H 0 1 N N N N N N 19.655 12.371 21.236 6.804 0.399 -0.076 H35 90H 74 90H H36 H36 H 0 1 N N N N N N 18.967 9.899 26.176 4.173 -2.462 1.014 H36 90H 75 90H H37 H37 H 0 1 N N N N N N 19.527 11.257 27.209 2.447 -2.497 0.518 H37 90H 76 90H H38 H38 H 0 1 N N N N N N 16.441 8.846 28.630 5.057 -4.929 -1.677 H38 90H 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 90H C20 N4 SING N N 1 90H N4 C19 SING N N 2 90H C19 O5 DOUB N N 3 90H C19 C18 SING N N 4 90H O4 C18 SING N N 5 90H C18 C17 SING N N 6 90H C7 C5 SING N N 7 90H C17 N3 SING N N 8 90H C17 C21 SING N N 9 90H C3 C5 SING N N 10 90H C3 C4 SING N N 11 90H C3 C2 SING N N 12 90H N3 C1 SING N N 13 90H C21 C22 SING N N 14 90H C5 C4 SING N N 15 90H C5 C6 SING N N 16 90H C1 O1 DOUB N N 17 90H C1 C2 SING N N 18 90H C4 C8 SING N N 19 90H C2 N1 SING N N 20 90H C22 C23 SING N N 21 90H C22 C25 SING N N 22 90H C23 C24 SING N N 23 90H C8 N1 SING N N 24 90H N1 C9 SING N N 25 90H O6 C25 DOUB N N 26 90H C25 N5 SING N N 27 90H N5 C24 SING N N 28 90H O3 C9 DOUB N N 29 90H C9 C10 SING N N 30 90H C13 C11 SING N N 31 90H C10 C11 SING N N 32 90H C10 N2 SING N N 33 90H C11 C12 SING N N 34 90H C11 C14 SING N N 35 90H N2 C15 SING N N 36 90H O2 C15 DOUB N N 37 90H C15 C16 SING N N 38 90H F2 C16 SING N N 39 90H F3 C16 SING N N 40 90H C16 F1 SING N N 41 90H N3 H1 SING N N 42 90H C4 H2 SING N N 43 90H C6 H3 SING N N 44 90H C6 H4 SING N N 45 90H C6 H5 SING N N 46 90H C7 H6 SING N N 47 90H C7 H7 SING N N 48 90H C7 H8 SING N N 49 90H C8 H9 SING N N 50 90H C8 H10 SING N N 51 90H C10 H11 SING N N 52 90H C13 H12 SING N N 53 90H C13 H13 SING N N 54 90H C13 H14 SING N N 55 90H C17 H15 SING N N 56 90H C20 H16 SING N N 57 90H C20 H17 SING N N 58 90H C20 H18 SING N N 59 90H C21 H19 SING N N 60 90H C21 H20 SING N N 61 90H C22 H21 SING N N 62 90H C24 H22 SING N N 63 90H C24 H23 SING N N 64 90H C2 H24 SING N N 65 90H C3 H25 SING N N 66 90H C12 H26 SING N N 67 90H C12 H27 SING N N 68 90H C12 H28 SING N N 69 90H C14 H29 SING N N 70 90H C14 H30 SING N N 71 90H C14 H31 SING N N 72 90H N2 H32 SING N N 73 90H C18 H33 SING N N 74 90H O4 H34 SING N N 75 90H N4 H35 SING N N 76 90H C23 H36 SING N N 77 90H C23 H37 SING N N 78 90H N5 H38 SING N N 79 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 90H SMILES ACDLabs 12.01 "CC1(C)C2C(C(=O)NC(CC3CCNC3=O)C(O)C(=O)NC)N(CC21)C(=O)C(NC(=O)C(F)(F)F)C(C)(C)C" 90H InChI InChI 1.03 "InChI=1S/C25H38F3N5O6/c1-23(2,3)17(32-22(39)25(26,27)28)21(38)33-10-12-14(24(12,4)5)15(33)19(36)31-13(16(34)20(37)29-6)9-11-7-8-30-18(11)35/h11-17,34H,7-10H2,1-6H3,(H,29,37)(H,30,35)(H,31,36)(H,32,39)/t11-,12-,13-,14-,15-,16+,17+/m0/s1" 90H InChIKey InChI 1.03 QDKCXRMRZLIIFP-OGEQHFGCSA-N 90H SMILES_CANONICAL CACTVS 3.385 "CNC(=O)[C@H](O)[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@@H]2[C@@H]3[C@H](CN2C(=O)[C@@H](NC(=O)C(F)(F)F)C(C)(C)C)C3(C)C" 90H SMILES CACTVS 3.385 "CNC(=O)[CH](O)[CH](C[CH]1CCNC1=O)NC(=O)[CH]2[CH]3[CH](CN2C(=O)[CH](NC(=O)C(F)(F)F)C(C)(C)C)C3(C)C" 90H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H]2[C@H]1[C@H](N(C2)C(=O)[C@H](C(C)(C)C)NC(=O)C(F)(F)F)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@H](C(=O)NC)O)C" 90H SMILES "OpenEye OEToolkits" 2.0.7 "CC1(C2C1C(N(C2)C(=O)C(C(C)(C)C)NC(=O)C(F)(F)F)C(=O)NC(CC3CCNC3=O)C(C(=O)NC)O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 90H "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S,5S)-N-{(2S,3R)-3-hydroxy-4-(methylamino)-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" 90H "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S},5~{S})-3-[(2~{S})-3,3-dimethyl-2-[2,2,2-tris(fluoranyl)ethanoylamino]butanoyl]-6,6-dimethyl-~{N}-[(2~{S},3~{R})-4-(methylamino)-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 90H "Create component" 2021-10-04 RCSB 90H "Initial release" 2022-10-05 RCSB 90H "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 90H _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C18 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #