data_90I # _chem_comp.id 90I _chem_comp.name "benzyl (S)-2-(((S)-3,4-dioxo-1-((S)-2-oxopyrrolidin-3-yl)-4-(phenethylamino)butan-2-yl)carbamoyl)pyrrolidine-1-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H36 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(phenylmethyl) (2S)-2-[[(2S)-3,4-bis(oxidanylidene)-1-[(3S)-2-oxidanylidenepyrrolidin-3-yl]-4-(2-phenylethylamino)butan-2-yl]carbamoyl]pyrrolidine-1-carboxylate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-11-10 _chem_comp.pdbx_modified_date 2022-11-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 536.619 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 90I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7Q5E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 90I C5 C1 C 0 1 Y N N 19.760 7.200 -36.679 -8.804 -2.424 -1.568 C5 90I 1 90I C4 C2 C 0 1 Y N N 19.081 6.091 -36.187 -8.719 -2.181 -0.209 C4 90I 2 90I C3 C3 C 0 1 Y N N 19.040 5.847 -34.816 -7.652 -1.464 0.299 C3 90I 3 90I C2 C4 C 0 1 Y N N 19.693 6.723 -33.955 -6.670 -0.989 -0.551 C2 90I 4 90I C6 C5 C 0 1 Y N N 20.411 8.071 -35.812 -7.823 -1.949 -2.418 C6 90I 5 90I C1 C6 C 0 1 N N N 19.656 6.472 -32.475 -5.508 -0.207 0.003 C1 90I 6 90I C15 C7 C 0 1 N N S 18.458 4.961 -26.138 0.851 4.282 -0.263 C15 90I 7 90I C18 C8 C 0 1 N N N 17.018 4.914 -25.689 0.704 3.847 -1.705 C18 90I 8 90I C14 C9 C 0 1 N N N 19.317 3.948 -25.414 0.252 3.234 0.677 C14 90I 9 90I C28 C10 C 0 1 Y N N 26.091 2.575 -23.798 5.255 -3.546 -1.187 C28 90I 10 90I C27 C11 C 0 1 Y N N 26.805 2.185 -24.931 6.068 -4.663 -1.170 C27 90I 11 90I C26 C12 C 0 1 Y N N 27.309 3.140 -25.814 7.443 -4.518 -1.198 C26 90I 12 90I C25 C13 C 0 1 Y N N 27.092 4.491 -25.576 8.004 -3.256 -1.244 C25 90I 13 90I C24 C14 C 0 1 Y N N 26.377 4.882 -24.448 7.190 -2.138 -1.262 C24 90I 14 90I C23 C15 C 0 1 Y N N 25.902 3.927 -23.555 5.816 -2.283 -1.233 C23 90I 15 90I C22 C16 C 0 1 N N N 25.112 4.372 -22.353 4.929 -1.065 -1.258 C22 90I 16 90I N N1 N 0 1 N N N 21.776 4.073 -30.751 -2.272 -1.365 1.196 N 90I 17 90I C C17 C 0 1 N N N 20.781 4.929 -30.953 -3.310 -0.575 0.858 C 90I 18 90I O O1 O 0 1 N N N 19.790 5.005 -30.217 -3.234 0.628 1.014 O 90I 19 90I C10 C18 C 0 1 N N N 23.167 2.599 -29.585 -0.155 -2.169 2.069 C10 90I 20 90I C11 C19 C 0 1 N N S 21.776 3.256 -29.543 -1.036 -0.920 1.858 C11 90I 21 90I C12 C20 C 0 1 N N N 21.536 4.052 -28.299 -0.316 0.074 0.984 C12 90I 22 90I C13 C21 C 0 1 N N S 20.740 3.835 -25.992 1.153 1.998 0.702 C13 90I 23 90I C16 C22 C 0 1 N N N 18.857 6.418 -25.857 0.051 5.603 -0.182 C16 90I 24 90I C17 C23 C 0 1 N N N 17.573 7.179 -25.522 0.092 6.087 -1.648 C17 90I 25 90I C19 C24 C 0 1 N N R 21.487 2.694 -25.283 2.518 2.373 1.282 C19 90I 26 90I C20 C25 C 0 1 N N N 21.935 3.121 -23.933 3.405 1.155 1.307 C20 90I 27 90I C21 C26 C 0 1 N N N 23.662 3.932 -22.449 4.648 -0.609 0.176 C21 90I 28 90I C7 C27 C 0 1 Y N N 20.380 7.832 -34.444 -6.755 -1.233 -1.909 C7 90I 29 90I C8 C28 C 0 1 N N N 22.936 3.809 -31.620 -2.189 -2.819 0.970 C8 90I 30 90I C9 C29 C 0 1 N N N 23.517 2.511 -31.058 -1.186 -3.330 2.035 C9 90I 31 90I N1 N2 N 0 1 N N N 20.699 3.494 -27.420 0.536 0.961 1.534 N1 90I 32 90I N2 N3 N 0 1 N N N 16.574 6.135 -25.360 0.273 4.875 -2.456 N2 90I 33 90I N3 N4 N 0 1 N N N 23.168 3.638 -23.796 3.786 0.575 0.151 N3 90I 34 90I O1 O2 O 0 1 N N N 20.853 5.810 -32.097 -4.430 -1.118 0.345 O1 90I 35 90I O2 O3 O 0 1 N N N 16.349 3.891 -25.661 0.941 2.733 -2.122 O2 90I 36 90I O3 O4 O 0 1 N N N 21.191 3.002 -23.006 3.776 0.696 2.366 O3 90I 37 90I O4 O5 O 0 1 N N N 22.617 2.342 -26.089 2.350 2.867 2.612 O4 90I 38 90I O5 O6 O 0 1 N N N 22.052 5.128 -28.110 -0.503 0.075 -0.214 O5 90I 39 90I H5 H1 H 0 1 N N N 19.782 7.386 -37.743 -9.635 -2.988 -1.964 H5 90I 40 90I H41 H2 H 0 1 N N N 18.584 5.417 -36.869 -9.485 -2.552 0.455 H41 90I 41 90I H31 H3 H 0 1 N N N 18.509 4.990 -34.427 -7.585 -1.274 1.360 H31 90I 42 90I H6 H4 H 0 1 N N N 20.938 8.930 -36.201 -7.889 -2.138 -3.479 H6 90I 43 90I H11 H5 H 0 1 N N N 19.577 7.429 -31.939 -5.158 0.504 -0.745 H11 90I 44 90I H12 H6 H 0 1 N N N 18.790 5.841 -32.228 -5.825 0.332 0.896 H12 90I 45 90I H18 H7 H 0 1 N N N 18.510 4.776 -27.221 1.900 4.457 -0.023 H18 90I 46 90I H16 H8 H 0 1 N N N 19.391 4.244 -24.357 0.176 3.649 1.682 H16 90I 47 90I H17 H9 H 0 1 N N N 18.832 2.963 -25.485 -0.740 2.954 0.323 H17 90I 48 90I H29 H10 H 0 1 N N N 25.691 1.835 -23.120 4.181 -3.659 -1.169 H29 90I 49 90I H28 H11 H 0 1 N N N 26.969 1.135 -25.126 5.630 -5.650 -1.135 H28 90I 50 90I H27 H12 H 0 1 N N N 27.869 2.829 -26.684 8.078 -5.391 -1.185 H27 90I 51 90I H26 H13 H 0 1 N N N 27.475 5.233 -26.261 9.077 -3.142 -1.265 H26 90I 52 90I H25 H14 H 0 1 N N N 26.190 5.930 -24.265 7.628 -1.152 -1.297 H25 90I 53 90I H24 H15 H 0 1 N N N 25.560 3.934 -21.449 5.427 -0.264 -1.803 H24 90I 54 90I H23 H16 H 0 1 N N N 25.149 5.469 -22.286 3.989 -1.311 -1.752 H23 90I 55 90I H10 H17 H 0 1 N N N 23.134 1.596 -29.135 0.573 -2.268 1.264 H10 90I 56 90I H13 H18 H 0 1 N N N 23.903 3.217 -29.049 0.346 -2.128 3.037 H13 90I 57 90I H14 H19 H 0 1 N N N 21.011 2.470 -29.625 -1.274 -0.467 2.820 H14 90I 58 90I H15 H20 H 0 1 N N N 21.278 4.782 -25.836 1.280 1.620 -0.313 H15 90I 59 90I H2A H21 H 0 1 N N N 19.554 6.461 -25.007 -0.975 5.418 0.139 H2A 90I 60 90I H19 H22 H 0 1 N N N 19.335 6.857 -26.746 0.542 6.317 0.479 H19 90I 61 90I H2C H23 H 0 1 N N N 17.691 7.754 -24.592 -0.845 6.579 -1.910 H2C 90I 62 90I H2B H24 H 0 1 N N N 17.297 7.859 -26.341 0.931 6.768 -1.797 H2B 90I 63 90I H21 H26 H 0 1 N N N 23.038 4.735 -22.030 4.149 -1.411 0.721 H21 90I 64 90I H22 H27 H 0 1 N N N 23.546 3.022 -21.842 5.588 -0.364 0.669 H22 90I 65 90I H7 H28 H 0 1 N N N 20.885 8.502 -33.764 -5.988 -0.862 -2.573 H7 90I 66 90I H82 H29 H 0 1 N N N 23.669 4.627 -31.557 -3.166 -3.280 1.118 H82 90I 67 90I H81 H30 H 0 1 N N N 22.622 3.678 -32.666 -1.818 -3.030 -0.033 H81 90I 68 90I H91 H31 H 0 1 N N N 23.049 1.632 -31.525 -0.715 -4.259 1.714 H91 90I 69 90I H92 H32 H 0 1 N N N 24.606 2.468 -31.205 -1.673 -3.454 3.002 H92 90I 70 90I H93 H33 H 0 1 N N N 20.027 2.827 -27.743 0.741 0.914 2.481 H93 90I 71 90I H94 H34 H 0 1 N N N 15.645 6.311 -25.034 0.103 4.823 -3.409 H94 90I 72 90I H32 H35 H 0 1 N N N 23.737 3.818 -24.598 3.489 0.941 -0.696 H32 90I 73 90I H1 H36 H 0 1 N Y N 20.808 1.834 -25.187 2.976 3.144 0.663 H1 90I 74 90I H42 H37 H 0 1 N N N 23.097 1.637 -25.671 1.947 2.233 3.220 H42 90I 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 90I C5 C4 DOUB Y N 1 90I C5 C6 SING Y N 2 90I C4 C3 SING Y N 3 90I C6 C7 DOUB Y N 4 90I C3 C2 DOUB Y N 5 90I C7 C2 SING Y N 6 90I C2 C1 SING N N 7 90I C1 O1 SING N N 8 90I O1 C SING N N 9 90I C8 C9 SING N N 10 90I C8 N SING N N 11 90I C9 C10 SING N N 12 90I C N SING N N 13 90I C O DOUB N N 14 90I N C11 SING N N 15 90I C10 C11 SING N N 16 90I C11 C12 SING N N 17 90I C12 O5 DOUB N N 18 90I C12 N1 SING N N 19 90I N1 C13 SING N N 20 90I C15 C16 SING N N 21 90I C15 C18 SING N N 22 90I C15 C14 SING N N 23 90I O4 C19 SING N N 24 90I C13 C14 SING N N 25 90I C13 C19 SING N N 26 90I C16 C17 SING N N 27 90I C26 C25 DOUB Y N 28 90I C26 C27 SING Y N 29 90I C18 O2 DOUB N N 30 90I C18 N2 SING N N 31 90I C25 C24 SING Y N 32 90I C17 N2 SING N N 33 90I C19 C20 SING N N 34 90I C27 C28 DOUB Y N 35 90I C24 C23 DOUB Y N 36 90I C20 N3 SING N N 37 90I C20 O3 DOUB N N 38 90I C28 C23 SING Y N 39 90I N3 C21 SING N N 40 90I C23 C22 SING N N 41 90I C21 C22 SING N N 42 90I C5 H5 SING N N 43 90I C4 H41 SING N N 44 90I C3 H31 SING N N 45 90I C6 H6 SING N N 46 90I C1 H11 SING N N 47 90I C1 H12 SING N N 48 90I C15 H18 SING N N 49 90I C14 H16 SING N N 50 90I C14 H17 SING N N 51 90I C28 H29 SING N N 52 90I C27 H28 SING N N 53 90I C26 H27 SING N N 54 90I C25 H26 SING N N 55 90I C24 H25 SING N N 56 90I C22 H24 SING N N 57 90I C22 H23 SING N N 58 90I C10 H10 SING N N 59 90I C10 H13 SING N N 60 90I C11 H14 SING N N 61 90I C13 H15 SING N N 62 90I C16 H2A SING N N 63 90I C16 H19 SING N N 64 90I C17 H2C SING N N 65 90I C17 H2B SING N N 66 90I C21 H21 SING N N 67 90I C21 H22 SING N N 68 90I C7 H7 SING N N 69 90I C8 H82 SING N N 70 90I C8 H81 SING N N 71 90I C9 H91 SING N N 72 90I C9 H92 SING N N 73 90I N1 H93 SING N N 74 90I N2 H94 SING N N 75 90I N3 H32 SING N N 76 90I C19 H1 SING N N 77 90I O4 H42 SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 90I InChI InChI 1.06 "InChI=1S/C29H36N4O6/c34-25(28(37)31-15-13-20-8-3-1-4-9-20)23(18-22-14-16-30-26(22)35)32-27(36)24-12-7-17-33(24)29(38)39-19-21-10-5-2-6-11-21/h1-6,8-11,22-25,34H,7,12-19H2,(H,30,35)(H,31,37)(H,32,36)/t22-,23-,24-,25+/m0/s1" 90I InChIKey InChI 1.06 AJCTZJFZKXWMHB-OJJQZRKESA-N 90I SMILES_CANONICAL CACTVS 3.385 "O[C@H]([C@H](C[C@@H]1CCNC1=O)NC(=O)[C@@H]2CCCN2C(=O)OCc3ccccc3)C(=O)NCCc4ccccc4" 90I SMILES CACTVS 3.385 "O[CH]([CH](C[CH]1CCNC1=O)NC(=O)[CH]2CCCN2C(=O)OCc3ccccc3)C(=O)NCCc4ccccc4" 90I SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)CCNC(=O)[C@@H]([C@H](C[C@@H]2CCNC2=O)NC(=O)[C@@H]3CCCN3C(=O)OCc4ccccc4)O" 90I SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)CCNC(=O)C(C(CC2CCNC2=O)NC(=O)C3CCCN3C(=O)OCc4ccccc4)O" # _pdbx_chem_comp_identifier.comp_id 90I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "(phenylmethyl) (2~{S})-2-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-(2-phenylethylamino)butan-2-yl]carbamoyl]pyrrolidine-1-carboxylate" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 90I _pdbx_chem_comp_synonyms.name "(phenylmethyl) (2S)-2-[[(2S)-3,4-bis(oxidanylidene)-1-[(3S)-2-oxidanylidenepyrrolidin-3-yl]-4-(2-phenylethylamino)butan-2-yl]carbamoyl]pyrrolidine-1-carboxylate" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 90I "Create component" 2021-11-10 PDBE 90I "Modify descriptor" 2022-08-22 RCSB 90I "Modify coordinates" 2022-11-15 PDBE 90I "Initial release" 2022-11-23 RCSB #