data_98O # _chem_comp.id 98O _chem_comp.name "(2S,4S)-N-((3R,5R)-5-((2-chloro-4-((4-(morpholinomethyl)phenyl)ethynyl)benzamido)methyl)-1-(cyclopropanecarbonyl)pyrrolidin-3-yl)-4-fluoropyrrolidine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H39 Cl F N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(2S,4S)-N-[(3R,5R)-5-[[[2-chloranyl-4-[2-[4-(morpholin-4-ylmethyl)phenyl]ethynyl]phenyl]carbonylamino]methyl]-1-cyclopropylcarbonyl-pyrrolidin-3-yl]-4-fluoranyl-pyrrolidine-2-carboxamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-11-11 _chem_comp.pdbx_modified_date 2022-10-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 636.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 98O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7PZS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 98O C4 C1 C 0 1 N N R -7.195 18.032 -6.030 -4.451 -1.423 1.019 C4 98O 1 98O C6 C2 C 0 1 N N N -8.576 18.949 -7.795 -6.746 -0.947 0.537 C6 98O 2 98O N1 N1 N 0 1 N N N -7.864 16.966 -9.025 -6.500 1.443 -0.110 N1 98O 3 98O C2 C3 C 0 1 N N R -7.408 18.212 -8.439 -6.027 0.403 0.807 C2 98O 4 98O C3 C4 C 0 1 N N N -6.404 17.959 -7.327 -4.549 0.032 0.515 C3 98O 5 98O N5 N2 N 0 1 N N N -8.330 18.889 -6.359 -5.814 -1.976 1.032 N5 98O 6 98O C7 C5 C 0 1 N N N -7.677 16.637 -5.640 -3.567 -2.242 0.076 C7 98O 7 98O N8 N3 N 0 1 N N N -6.586 15.939 -4.985 -2.197 -1.724 0.119 N8 98O 8 98O C9 C6 C 0 1 N N N -6.588 14.630 -4.745 -1.261 -2.227 -0.710 C9 98O 9 98O O10 O1 O 0 1 N N N -7.523 13.916 -5.070 -1.553 -3.110 -1.493 O10 98O 10 98O C11 C7 C 0 1 Y N N -5.403 14.040 -4.030 0.119 -1.705 -0.667 C11 98O 11 98O C12 C8 C 0 1 Y N N -4.095 14.388 -4.351 0.456 -0.693 0.237 C12 98O 12 98O C13 C9 C 0 1 Y N N -3.029 13.820 -3.653 1.731 -0.208 0.280 C13 98O 13 98O C14 C10 C 0 1 Y N N -3.235 12.896 -2.629 2.707 -0.721 -0.581 C14 98O 14 98O C15 C11 C 0 1 Y N N -4.525 12.522 -2.271 2.377 -1.734 -1.488 C15 98O 15 98O C16 C12 C 0 1 Y N N -5.621 13.060 -2.936 1.092 -2.227 -1.528 C16 98O 16 98O C17 C13 C 0 1 N N N -9.021 19.539 -5.428 -6.154 -3.217 1.431 C17 98O 17 98O O18 O2 O 0 1 N N N -9.779 20.454 -5.705 -5.315 -3.953 1.907 O18 98O 18 98O C19 C14 C 0 1 N N N -8.841 19.116 -4.001 -7.577 -3.692 1.286 C19 98O 19 98O C20 C15 C 0 1 N N N -10.118 18.956 -3.183 -7.899 -5.112 1.757 C20 98O 20 98O C21 C16 C 0 1 N N N -9.206 20.155 -2.949 -7.852 -4.795 0.261 C21 98O 21 98O CL25 CL1 CL 0 0 N N N -7.295 12.586 -2.493 0.677 -3.488 -2.646 CL25 98O 22 98O C26 C17 C 0 1 N N N -7.073 16.203 -9.774 -7.596 2.165 0.199 C26 98O 23 98O O27 O3 O 0 1 N N N -5.908 16.473 -10.015 -8.189 1.954 1.235 O27 98O 24 98O C28 C18 C 0 1 N N S -7.685 14.955 -10.336 -8.083 3.235 -0.744 C28 98O 25 98O N29 N4 N 0 1 N N N -6.657 14.187 -11.062 -9.470 3.639 -0.398 N29 98O 26 98O C30 C19 C 0 1 N N N -6.093 13.193 -10.130 -9.616 4.992 -0.995 C30 98O 27 98O C31 C20 C 0 1 N N S -6.954 13.195 -8.873 -8.257 5.679 -0.739 C31 98O 28 98O C32 C21 C 0 1 N N N -8.157 14.062 -9.201 -7.249 4.523 -0.574 C32 98O 29 98O F33 F1 F 0 1 N N N -6.269 13.765 -7.833 -8.313 6.445 0.430 F33 98O 30 98O C34 C22 C 0 1 N N N -2.241 12.385 -1.985 4.044 -0.210 -0.535 C34 98O 31 98O C35 C23 C 0 1 N N N -1.341 12.036 -1.284 5.140 0.210 -0.496 C35 98O 32 98O C36 C24 C 0 1 Y N N -0.417 11.799 -0.415 6.476 0.721 -0.450 C36 98O 33 98O C37 C25 C 0 1 Y N N 0.728 12.584 -0.436 6.811 1.729 0.459 C37 98O 34 98O C38 C26 C 0 1 Y N N 1.744 12.372 0.490 8.101 2.217 0.498 C38 98O 35 98O C39 C27 C 0 1 Y N N 1.626 11.372 1.448 9.062 1.711 -0.360 C39 98O 36 98O C40 C28 C 0 1 Y N N 0.475 10.587 1.478 8.738 0.713 -1.262 C40 98O 37 98O C41 C29 C 0 1 Y N N -0.542 10.800 0.549 7.454 0.211 -1.309 C41 98O 38 98O C42 C30 C 0 1 N N N 2.757 11.188 2.439 10.468 2.250 -0.311 C42 98O 39 98O N43 N5 N 0 1 N N N 3.297 9.823 2.520 11.260 1.466 0.646 N43 98O 40 98O C44 C31 C 0 1 N N N 4.527 9.892 3.326 12.561 2.102 0.899 C44 98O 41 98O C45 C32 C 0 1 N N N 5.238 8.544 3.370 13.327 1.286 1.944 C45 98O 42 98O O46 O4 O 0 1 N N N 5.518 8.103 2.044 13.463 -0.061 1.484 O46 98O 43 98O C47 C33 C 0 1 N N N 4.321 7.961 1.283 12.215 -0.711 1.228 C47 98O 44 98O C48 C34 C 0 1 N N N 3.614 9.309 1.180 11.438 0.084 0.176 C48 98O 45 98O H1 H1 H 0 1 N N N -6.582 18.466 -5.227 -4.035 -1.440 2.026 H1 98O 46 98O H2 H2 H 0 1 N N N -8.606 19.994 -8.137 -7.688 -0.993 1.084 H2 98O 47 98O H3 H3 H 0 1 N N N -9.527 18.454 -8.043 -6.923 -1.077 -0.531 H3 98O 48 98O H4 H4 H 0 1 N N N -8.805 16.671 -8.860 -6.025 1.612 -0.938 H4 98O 49 98O H5 H5 H 0 1 N N N -6.950 18.853 -9.207 -6.154 0.712 1.844 H5 98O 50 98O H6 H6 H 0 1 N N N -5.948 16.965 -7.442 -3.872 0.679 1.072 H6 98O 51 98O H7 H7 H 0 1 N N N -5.617 18.727 -7.339 -4.342 0.085 -0.554 H7 98O 52 98O H8 H8 H 0 1 N N N -8.531 16.719 -4.952 -3.571 -3.286 0.390 H8 98O 53 98O H9 H9 H 0 1 N N N -7.983 16.085 -6.541 -3.952 -2.167 -0.941 H9 98O 54 98O H10 H10 H 0 1 N N N -5.789 16.471 -4.698 -1.964 -1.019 0.744 H10 98O 55 98O H11 H11 H 0 1 N N N -3.905 15.099 -5.142 -0.295 -0.295 0.904 H11 98O 56 98O H12 H12 H 0 1 N N N -2.019 14.103 -3.912 1.987 0.573 0.980 H12 98O 57 98O H13 H13 H 0 1 N N N -4.677 11.810 -1.473 3.129 -2.131 -2.154 H13 98O 58 98O H14 H14 H 0 1 N N N -8.007 18.437 -3.770 -8.343 -2.930 1.423 H14 98O 59 98O H15 H15 H 0 1 N N N -11.099 19.096 -3.661 -7.082 -5.702 2.172 H15 98O 60 98O H16 H16 H 0 1 N N N -10.190 18.163 -2.424 -8.878 -5.283 2.204 H16 98O 61 98O H17 H17 H 0 1 N N N -8.620 20.227 -2.021 -8.800 -4.757 -0.276 H17 98O 62 98O H18 H18 H 0 1 N N N -9.529 21.160 -3.258 -7.004 -5.176 -0.308 H18 98O 63 98O H19 H19 H 0 1 N N N -8.527 15.204 -10.998 -8.033 2.884 -1.775 H19 98O 64 98O H20 H20 H 0 1 N N N -7.070 13.723 -11.846 -10.142 2.996 -0.790 H20 98O 65 98O H22 H22 H 0 1 N N N -6.108 12.195 -10.593 -9.808 4.916 -2.065 H22 98O 66 98O H23 H23 H 0 1 N N N -5.058 13.464 -9.875 -10.418 5.540 -0.502 H23 98O 67 98O H24 H24 H 0 1 N N N -7.282 12.170 -8.643 -7.984 6.304 -1.589 H24 98O 68 98O H25 H25 H 0 1 N N N -8.451 14.665 -8.329 -6.797 4.554 0.417 H25 98O 69 98O H26 H26 H 0 1 N N N -9.007 13.442 -9.522 -6.479 4.581 -1.344 H26 98O 70 98O H27 H27 H 0 1 N N N 0.830 13.364 -1.176 6.062 2.125 1.128 H27 98O 71 98O H28 H28 H 0 1 N N N 2.630 12.988 0.464 8.361 2.996 1.199 H28 98O 72 98O H29 H29 H 0 1 N N N 0.371 9.812 2.223 9.493 0.323 -1.928 H29 98O 73 98O H30 H30 H 0 1 N N N -1.431 10.188 0.576 7.204 -0.571 -2.010 H30 98O 74 98O H31 H31 H 0 1 N N N 3.577 11.862 2.150 10.919 2.178 -1.301 H31 98O 75 98O H32 H32 H 0 1 N N N 2.386 11.468 3.436 10.447 3.293 0.004 H32 98O 76 98O H34 H34 H 0 1 N N N 5.203 10.639 2.885 13.135 2.137 -0.027 H34 98O 77 98O H35 H35 H 0 1 N N N 4.267 10.193 4.351 12.406 3.114 1.271 H35 98O 78 98O H36 H36 H 0 1 N N N 4.593 7.807 3.872 14.316 1.721 2.093 H36 98O 79 98O H37 H37 H 0 1 N N N 6.181 8.646 3.928 12.780 1.296 2.886 H37 98O 80 98O H38 H38 H 0 1 N N N 3.657 7.237 1.778 12.399 -1.720 0.859 H38 98O 81 98O H39 H39 H 0 1 N N N 4.570 7.601 0.274 11.635 -0.761 2.150 H39 98O 82 98O H40 H40 H 0 1 N N N 4.270 10.024 0.663 10.462 -0.375 0.020 H40 98O 83 98O H41 H41 H 0 1 N N N 2.682 9.187 0.608 11.994 0.088 -0.762 H41 98O 84 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 98O N29 C28 SING N N 1 98O N29 C30 SING N N 2 98O C28 C26 SING N N 3 98O C28 C32 SING N N 4 98O C30 C31 SING N N 5 98O O27 C26 DOUB N N 6 98O C26 N1 SING N N 7 98O C32 C31 SING N N 8 98O N1 C2 SING N N 9 98O C31 F33 SING N N 10 98O C2 C6 SING N N 11 98O C2 C3 SING N N 12 98O C6 N5 SING N N 13 98O C3 C4 SING N N 14 98O N5 C4 SING N N 15 98O N5 C17 SING N N 16 98O C4 C7 SING N N 17 98O O18 C17 DOUB N N 18 98O C7 N8 SING N N 19 98O C17 C19 SING N N 20 98O O10 C9 DOUB N N 21 98O N8 C9 SING N N 22 98O C9 C11 SING N N 23 98O C12 C11 DOUB Y N 24 98O C12 C13 SING Y N 25 98O C11 C16 SING Y N 26 98O C19 C20 SING N N 27 98O C19 C21 SING N N 28 98O C13 C14 DOUB Y N 29 98O C20 C21 SING N N 30 98O C16 CL25 SING N N 31 98O C16 C15 DOUB Y N 32 98O C14 C15 SING Y N 33 98O C14 C34 SING N N 34 98O C34 C35 TRIP N N 35 98O C35 C36 SING N N 36 98O C37 C36 DOUB Y N 37 98O C37 C38 SING Y N 38 98O C36 C41 SING Y N 39 98O C38 C39 DOUB Y N 40 98O C41 C40 DOUB Y N 41 98O C48 C47 SING N N 42 98O C48 N43 SING N N 43 98O C47 O46 SING N N 44 98O C39 C40 SING Y N 45 98O C39 C42 SING N N 46 98O O46 C45 SING N N 47 98O C42 N43 SING N N 48 98O N43 C44 SING N N 49 98O C44 C45 SING N N 50 98O C4 H1 SING N N 51 98O C6 H2 SING N N 52 98O C6 H3 SING N N 53 98O N1 H4 SING N N 54 98O C2 H5 SING N N 55 98O C3 H6 SING N N 56 98O C3 H7 SING N N 57 98O C7 H8 SING N N 58 98O C7 H9 SING N N 59 98O N8 H10 SING N N 60 98O C12 H11 SING N N 61 98O C13 H12 SING N N 62 98O C15 H13 SING N N 63 98O C19 H14 SING N N 64 98O C20 H15 SING N N 65 98O C20 H16 SING N N 66 98O C21 H17 SING N N 67 98O C21 H18 SING N N 68 98O C28 H19 SING N N 69 98O N29 H20 SING N N 70 98O C30 H22 SING N N 71 98O C30 H23 SING N N 72 98O C31 H24 SING N N 73 98O C32 H25 SING N N 74 98O C32 H26 SING N N 75 98O C37 H27 SING N N 76 98O C38 H28 SING N N 77 98O C40 H29 SING N N 78 98O C41 H30 SING N N 79 98O C42 H31 SING N N 80 98O C42 H32 SING N N 81 98O C44 H34 SING N N 82 98O C44 H35 SING N N 83 98O C45 H36 SING N N 84 98O C45 H37 SING N N 85 98O C47 H38 SING N N 86 98O C47 H39 SING N N 87 98O C48 H40 SING N N 88 98O C48 H41 SING N N 89 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 98O InChI InChI 1.06 "InChI=1S/C34H39ClFN5O4/c35-30-15-23(4-1-22-2-5-24(6-3-22)20-40-11-13-45-14-12-40)7-10-29(30)32(42)38-19-28-17-27(21-41(28)34(44)25-8-9-25)39-33(43)31-16-26(36)18-37-31/h2-3,5-7,10,15,25-28,31,37H,8-9,11-14,16-21H2,(H,38,42)(H,39,43)/t26-,27+,28+,31-/m0/s1" 98O InChIKey InChI 1.06 GIGCGLXLMRWTTB-INXMUBLWSA-N 98O SMILES_CANONICAL CACTVS 3.385 "F[C@@H]1CN[C@@H](C1)C(=O)N[C@@H]2C[C@H](CNC(=O)c3ccc(cc3Cl)C#Cc4ccc(CN5CCOCC5)cc4)N(C2)C(=O)C6CC6" 98O SMILES CACTVS 3.385 "F[CH]1CN[CH](C1)C(=O)N[CH]2C[CH](CNC(=O)c3ccc(cc3Cl)C#Cc4ccc(CN5CCOCC5)cc4)N(C2)C(=O)C6CC6" 98O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CN2CCOCC2)C#Cc3ccc(c(c3)Cl)C(=O)NC[C@H]4C[C@H](CN4C(=O)C5CC5)NC(=O)[C@@H]6C[C@@H](CN6)F" 98O SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CN2CCOCC2)C#Cc3ccc(c(c3)Cl)C(=O)NCC4CC(CN4C(=O)C5CC5)NC(=O)C6CC(CN6)F" # _pdbx_chem_comp_identifier.comp_id 98O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},4~{S})-~{N}-[(3~{R},5~{R})-5-[[[2-chloranyl-4-[2-[4-(morpholin-4-ylmethyl)phenyl]ethynyl]phenyl]carbonylamino]methyl]-1-cyclopropylcarbonyl-pyrrolidin-3-yl]-4-fluoranyl-pyrrolidine-2-carboxamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 98O _pdbx_chem_comp_synonyms.name "(2S,4S)-N-[(3R,5R)-5-[[[2-chloranyl-4-[2-[4-(morpholin-4-ylmethyl)phenyl]ethynyl]phenyl]carbonylamino]methyl]-1-cyclopropylcarbonyl-pyrrolidin-3-yl]-4-fluoranyl-pyrrolidine-2-carboxamide" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 98O "Create component" 2021-11-11 PDBE 98O "Modify descriptor" 2022-08-22 RCSB 98O "Initial release" 2022-11-02 RCSB #