data_98R # _chem_comp.id 98R _chem_comp.name "[(2S)-2-[(E)-octadec-10-enoyl]oxy-3-oxidanyl-propyl] octadec-10-enoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C39 H72 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-01-11 _chem_comp.pdbx_modified_date 2022-01-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 620.986 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 98R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7DXB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 98R C1 C1 C 0 1 N N N 154.915 128.088 175.376 -0.549 5.866 2.060 C1 98R 1 98R C2 C2 C 0 1 N N S 154.749 128.522 173.932 -0.695 5.739 0.543 C2 98R 2 98R C3 C3 C 0 1 N N N 154.578 127.280 173.075 0.691 5.764 -0.106 C3 98R 3 98R C11 C4 C 0 1 N N N 155.828 125.137 172.743 2.776 4.619 0.023 C11 98R 4 98R C12 C5 C 0 1 N N N 156.694 125.215 171.510 3.697 3.568 0.589 C12 98R 5 98R C13 C6 C 0 1 N N N 155.991 125.993 170.409 5.057 3.655 -0.106 C13 98R 6 98R C14 C7 C 0 1 N N N 156.245 125.316 169.070 5.992 2.588 0.469 C14 98R 7 98R C15 C8 C 0 1 N N N 156.113 126.309 167.928 7.353 2.675 -0.226 C15 98R 8 98R C16 C9 C 0 1 N N N 157.349 127.194 167.837 8.287 1.608 0.349 C16 98R 9 98R C17 C10 C 0 1 N N N 158.279 126.746 166.720 9.648 1.695 -0.346 C17 98R 10 98R C18 C11 C 0 1 N N N 157.605 126.883 165.360 10.582 0.628 0.228 C18 98R 11 98R C19 C12 C 0 1 N N N 157.228 128.329 165.075 11.943 0.715 -0.466 C19 98R 12 98R C31 C13 C 0 1 N N N 153.607 130.211 172.635 -2.696 4.506 0.145 C31 98R 13 98R C32 C14 C 0 1 N N N 153.686 129.605 171.268 -3.451 3.244 -0.182 C32 98R 14 98R C33 C15 C 0 1 N N N 152.384 129.928 170.569 -4.952 3.540 -0.208 C33 98R 15 98R C34 C16 C 0 1 N N N 152.576 129.883 169.069 -5.718 2.258 -0.540 C34 98R 16 98R C35 C17 C 0 1 N N N 153.249 128.592 168.666 -7.219 2.554 -0.567 C35 98R 17 98R C36 C18 C 0 1 N N N 153.565 128.615 167.183 -7.986 1.272 -0.899 C36 98R 18 98R C37 C19 C 0 1 N N N 152.349 128.976 166.350 -9.487 1.568 -0.926 C37 98R 19 98R C38 C20 C 0 1 N N N 152.650 128.726 164.881 -10.253 0.286 -1.258 C38 98R 20 98R C39 C21 C 0 1 N N N 151.496 129.153 163.991 -11.754 0.582 -1.285 C39 98R 21 98R C40 C22 C 0 1 N N N 151.277 128.115 162.920 -12.509 -0.681 -1.612 C40 98R 22 98R C41 C23 C 0 1 N N N 150.274 128.273 162.063 -13.455 -1.104 -0.811 C41 98R 23 98R C42 C24 C 0 1 N N N 150.022 127.257 160.982 -14.210 -2.367 -1.138 C42 98R 24 98R C43 C25 C 0 1 N N N 149.457 127.988 159.772 -14.121 -3.335 0.043 C43 98R 25 98R C44 C26 C 0 1 N N N 148.087 128.567 160.082 -14.888 -4.616 -0.289 C44 98R 26 98R C45 C27 C 0 1 N N N 146.983 127.703 159.496 -14.799 -5.584 0.893 C45 98R 27 98R C46 C28 C 0 1 N N N 146.379 128.392 158.286 -15.566 -6.866 0.561 C46 98R 28 98R C47 C29 C 0 1 N N N 145.071 127.732 157.882 -15.477 -7.834 1.743 C47 98R 29 98R C48 C30 C 0 1 N N N 144.094 128.758 157.359 -16.244 -9.116 1.411 C48 98R 30 98R O11 O1 O 0 1 N N N 155.370 124.068 173.110 3.168 5.360 -0.847 O11 98R 31 98R O2 O2 O 0 1 N N N 153.632 129.396 173.833 -1.356 4.486 0.224 O2 98R 32 98R O3 O3 O 0 1 N N N 155.534 126.327 173.515 1.521 4.730 0.485 O3 98R 33 98R O31 O4 O 0 1 N N N 153.484 131.408 172.751 -3.296 5.537 0.337 O31 98R 34 98R O3P O5 O 0 1 N N N 155.863 127.023 175.413 0.325 4.844 2.543 O3P 98R 35 98R H1 H1 H 0 1 N N N 155.279 128.932 175.979 -0.135 6.845 2.305 H1 98R 36 98R H2 H2 H 0 1 N N N 153.950 127.742 175.775 -1.528 5.759 2.529 H2 98R 37 98R H3 H3 H 0 1 N N N 155.663 129.045 173.615 -1.289 6.570 0.163 H3 98R 38 98R H4 H4 H 0 1 N N N 154.752 127.526 172.017 0.594 5.584 -1.177 H4 98R 39 98R H5 H5 H 0 1 N N N 153.562 126.877 173.196 1.151 6.738 0.058 H5 98R 40 98R H6 H6 H 0 1 N N N 156.907 124.197 171.153 3.824 3.735 1.658 H6 98R 41 98R H7 H7 H 0 1 N N N 157.638 125.720 171.763 3.267 2.580 0.423 H7 98R 42 98R H8 H8 H 0 1 N N N 156.381 127.021 170.380 4.930 3.488 -1.176 H8 98R 43 98R H9 H9 H 0 1 N N N 154.910 126.016 170.609 5.488 4.642 0.060 H9 98R 44 98R H10 H10 H 0 1 N N N 155.513 124.507 168.931 6.119 2.755 1.538 H10 98R 45 98R H11 H11 H 0 1 N N N 157.261 124.895 169.066 5.562 1.601 0.303 H11 98R 46 98R H12 H12 H 0 1 N N N 155.229 126.941 168.099 7.226 2.508 -1.296 H12 98R 47 98R H13 H13 H 0 1 N N N 155.993 125.759 166.983 7.783 3.662 -0.061 H13 98R 48 98R H14 H14 H 0 1 N N N 157.892 127.148 168.793 8.414 1.775 1.418 H14 98R 49 98R H15 H15 H 0 1 N N N 157.033 128.230 167.644 7.857 0.621 0.183 H15 98R 50 98R H16 H16 H 0 1 N N N 158.553 125.693 166.881 9.521 1.528 -1.416 H16 98R 51 98R H17 H17 H 0 1 N N N 159.186 127.368 166.736 10.078 2.682 -0.181 H17 98R 52 98R H18 H18 H 0 1 N N N 156.695 126.266 165.347 10.709 0.795 1.298 H18 98R 53 98R H19 H19 H 0 1 N N N 158.297 126.532 164.580 10.152 -0.359 0.063 H19 98R 54 98R H20 H20 H 0 1 N N N 156.739 128.880 165.892 11.816 0.548 -1.536 H20 98R 55 98R H21 H21 H 0 1 N N N 158.007 128.960 164.622 12.373 1.702 -0.301 H21 98R 56 98R H23 H23 H 0 1 N N N 153.814 128.515 171.344 -3.136 2.874 -1.158 H23 98R 57 98R H24 H24 H 0 1 N N N 154.531 130.036 170.711 -3.243 2.489 0.577 H24 98R 58 98R H25 H25 H 0 1 N N N 152.053 130.935 170.864 -5.267 3.909 0.767 H25 98R 59 98R H26 H26 H 0 1 N N N 151.621 129.191 170.861 -5.160 4.294 -0.967 H26 98R 60 98R H27 H27 H 0 1 N N N 153.203 130.732 168.758 -5.403 1.888 -1.516 H27 98R 61 98R H28 H28 H 0 1 N N N 151.595 129.951 168.575 -5.510 1.503 0.218 H28 98R 62 98R H29 H29 H 0 1 N N N 152.578 127.748 168.883 -7.534 2.923 0.408 H29 98R 63 98R H30 H30 H 0 1 N N N 154.182 128.474 169.236 -7.427 3.308 -1.326 H30 98R 64 98R H31 H31 H 0 1 N N N 153.921 127.619 166.880 -7.671 0.902 -1.875 H31 98R 65 98R H32 H32 H 0 1 N N N 154.355 129.358 166.999 -7.778 0.517 -0.141 H32 98R 66 98R H33 H33 H 0 1 N N N 152.105 130.038 166.499 -9.802 1.937 0.049 H33 98R 67 98R H34 H34 H 0 1 N N N 151.495 128.356 166.660 -9.695 2.322 -1.685 H34 98R 68 98R H35 H35 H 0 1 N N N 152.836 127.652 164.733 -9.938 -0.083 -2.234 H35 98R 69 98R H36 H36 H 0 1 N N N 153.548 129.296 164.599 -10.045 -0.469 -0.500 H36 98R 70 98R H37 H37 H 0 1 N N N 151.733 130.119 163.522 -12.069 0.951 -0.309 H37 98R 71 98R H38 H38 H 0 1 N N N 150.583 129.253 164.597 -11.962 1.337 -2.044 H38 98R 72 98R H39 H39 H 0 1 N N N 151.926 127.255 162.850 -12.271 -1.236 -2.507 H39 98R 73 98R H40 H40 H 0 1 N N N 149.633 129.139 162.143 -13.694 -0.549 0.084 H40 98R 74 98R H41 H41 H 0 1 N N N 149.300 126.507 161.336 -15.255 -2.125 -1.332 H41 98R 75 98R H42 H42 H 0 1 N N N 150.965 126.759 160.711 -13.775 -2.832 -2.022 H42 98R 76 98R H43 H43 H 0 1 N N N 149.369 127.282 158.933 -13.076 -3.576 0.237 H43 98R 77 98R H44 H44 H 0 1 N N N 150.139 128.805 159.493 -14.557 -2.869 0.928 H44 98R 78 98R H45 H45 H 0 1 N N N 148.018 129.578 159.653 -15.933 -4.375 -0.482 H45 98R 79 98R H46 H46 H 0 1 N N N 147.959 128.623 161.173 -14.452 -5.082 -1.173 H46 98R 80 98R H47 H47 H 0 1 N N N 146.202 127.545 160.254 -13.754 -5.826 1.087 H47 98R 81 98R H48 H48 H 0 1 N N N 147.401 126.732 159.192 -15.235 -5.119 1.777 H48 98R 82 98R H49 H49 H 0 1 N N N 147.087 128.331 157.446 -16.611 -6.625 0.367 H49 98R 83 98R H50 H50 H 0 1 N N N 146.189 129.448 158.530 -15.130 -7.331 -0.323 H50 98R 84 98R H51 H51 H 0 1 N N N 144.634 127.231 158.758 -14.432 -8.076 1.937 H51 98R 85 98R H52 H52 H 0 1 N N N 145.269 126.989 157.096 -15.913 -7.369 2.627 H52 98R 86 98R H53 H53 H 0 1 N N N 143.156 128.260 157.073 -16.180 -9.806 2.253 H53 98R 87 98R H54 H54 H 0 1 N N N 143.889 129.502 158.143 -17.289 -8.874 1.217 H54 98R 88 98R H55 H55 H 0 1 N N N 144.525 129.260 156.480 -15.808 -9.581 0.526 H55 98R 89 98R H56 H56 H 0 1 N N N 155.982 126.735 176.311 0.463 4.865 3.500 H56 98R 90 98R C20 C31 C 0 1 N N N ? ? ? 12.863 -0.336 0.100 C20 98R 91 98R C21 C32 C 0 1 N N N ? ? ? 13.446 -1.195 -0.699 C21 98R 92 98R C22 C33 C 0 1 N N N ? ? ? 14.366 -2.246 -0.133 C22 98R 93 98R C23 C34 C 0 1 N N N ? ? ? 13.895 -3.631 -0.579 C23 98R 94 98R C24 C35 C 0 1 N N N ? ? ? 14.829 -4.697 -0.004 C24 98R 95 98R C25 C36 C 0 1 N N N ? ? ? 14.358 -6.083 -0.451 C25 98R 96 98R C26 C37 C 0 1 N N N ? ? ? 15.292 -7.149 0.124 C26 98R 97 98R C27 C38 C 0 1 N N N ? ? ? 14.821 -8.535 -0.322 C27 98R 98 98R C28 C39 C 0 1 N N N ? ? ? 15.755 -9.601 0.253 C28 98R 99 98R H22 H22 H 0 1 N N N ? ? ? 13.043 -0.380 1.164 H22 98R 100 98R H57 H57 H 0 1 N N N ? ? ? 13.266 -1.151 -1.763 H57 98R 101 98R H58 H58 H 0 1 N N N ? ? ? 15.380 -2.073 -0.495 H58 98R 102 98R H59 H59 H 0 1 N N N ? ? ? 14.355 -2.191 0.955 H59 98R 103 98R H60 H60 H 0 1 N N N ? ? ? 12.881 -3.804 -0.218 H60 98R 104 98R H61 H61 H 0 1 N N N ? ? ? 13.907 -3.686 -1.668 H61 98R 105 98R H62 H62 H 0 1 N N N ? ? ? 15.843 -4.525 -0.366 H62 98R 106 98R H63 H63 H 0 1 N N N ? ? ? 14.818 -4.643 1.084 H63 98R 107 98R H64 H64 H 0 1 N N N ? ? ? 13.344 -6.255 -0.089 H64 98R 108 98R H65 H65 H 0 1 N N N ? ? ? 14.370 -6.138 -1.539 H65 98R 109 98R H66 H66 H 0 1 N N N ? ? ? 16.306 -6.977 -0.237 H66 98R 110 98R H67 H67 H 0 1 N N N ? ? ? 15.281 -7.094 1.213 H67 98R 111 98R H68 H68 H 0 1 N N N ? ? ? 13.807 -8.707 0.040 H68 98R 112 98R H69 H69 H 0 1 N N N ? ? ? 14.833 -8.590 -1.411 H69 98R 113 98R H70 H70 H 0 1 N N N ? ? ? 15.420 -10.588 -0.065 H70 98R 114 98R H71 H71 H 0 1 N N N ? ? ? 16.769 -9.429 -0.109 H71 98R 115 98R H72 H72 H 0 1 N N N ? ? ? 15.744 -9.546 1.341 H72 98R 116 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 98R C48 C47 SING N N 1 98R C47 C46 SING N N 2 98R C46 C45 SING N N 3 98R C45 C44 SING N N 4 98R C43 C44 SING N N 5 98R C43 C42 SING N N 6 98R C42 C41 SING N N 7 98R C41 C40 DOUB N E 8 98R C40 C39 SING N N 9 98R C39 C38 SING N N 10 98R C38 C37 SING N N 11 98R C19 C18 SING N N 12 98R C18 C17 SING N N 13 98R C37 C36 SING N N 14 98R C17 C16 SING N N 15 98R C36 C35 SING N N 16 98R C16 C15 SING N N 17 98R C15 C14 SING N N 18 98R C35 C34 SING N N 19 98R C34 C33 SING N N 20 98R C14 C13 SING N N 21 98R C13 C12 SING N N 22 98R C33 C32 SING N N 23 98R C32 C31 SING N N 24 98R C12 C11 SING N N 25 98R C31 O31 DOUB N N 26 98R C31 O2 SING N N 27 98R C11 O11 DOUB N N 28 98R C11 O3 SING N N 29 98R C3 O3 SING N N 30 98R C3 C2 SING N N 31 98R O2 C2 SING N N 32 98R C2 C1 SING N N 33 98R C1 O3P SING N N 34 98R C1 H1 SING N N 35 98R C1 H2 SING N N 36 98R C2 H3 SING N N 37 98R C3 H4 SING N N 38 98R C3 H5 SING N N 39 98R C12 H6 SING N N 40 98R C12 H7 SING N N 41 98R C13 H8 SING N N 42 98R C13 H9 SING N N 43 98R C14 H10 SING N N 44 98R C14 H11 SING N N 45 98R C15 H12 SING N N 46 98R C15 H13 SING N N 47 98R C16 H14 SING N N 48 98R C16 H15 SING N N 49 98R C17 H16 SING N N 50 98R C17 H17 SING N N 51 98R C18 H18 SING N N 52 98R C18 H19 SING N N 53 98R C19 H20 SING N N 54 98R C19 H21 SING N N 55 98R C32 H23 SING N N 56 98R C32 H24 SING N N 57 98R C33 H25 SING N N 58 98R C33 H26 SING N N 59 98R C34 H27 SING N N 60 98R C34 H28 SING N N 61 98R C35 H29 SING N N 62 98R C35 H30 SING N N 63 98R C36 H31 SING N N 64 98R C36 H32 SING N N 65 98R C37 H33 SING N N 66 98R C37 H34 SING N N 67 98R C38 H35 SING N N 68 98R C38 H36 SING N N 69 98R C39 H37 SING N N 70 98R C39 H38 SING N N 71 98R C40 H39 SING N N 72 98R C41 H40 SING N N 73 98R C42 H41 SING N N 74 98R C42 H42 SING N N 75 98R C43 H43 SING N N 76 98R C43 H44 SING N N 77 98R C44 H45 SING N N 78 98R C44 H46 SING N N 79 98R C45 H47 SING N N 80 98R C45 H48 SING N N 81 98R C46 H49 SING N N 82 98R C46 H50 SING N N 83 98R C47 H51 SING N N 84 98R C47 H52 SING N N 85 98R C48 H53 SING N N 86 98R C48 H54 SING N N 87 98R C48 H55 SING N N 88 98R O3P H56 SING N N 89 98R C19 C20 SING N N 90 98R C20 C21 DOUB N N 91 98R C21 C22 SING N N 92 98R C22 C23 SING N N 93 98R C23 C24 SING N N 94 98R C24 C25 SING N N 95 98R C25 C26 SING N N 96 98R C26 C27 SING N N 97 98R C27 C28 SING N N 98 98R C20 H22 SING N N 99 98R C21 H57 SING N N 100 98R C22 H58 SING N N 101 98R C22 H59 SING N N 102 98R C23 H60 SING N N 103 98R C23 H61 SING N N 104 98R C24 H62 SING N N 105 98R C24 H63 SING N N 106 98R C25 H64 SING N N 107 98R C25 H65 SING N N 108 98R C26 H66 SING N N 109 98R C26 H67 SING N N 110 98R C27 H68 SING N N 111 98R C27 H69 SING N N 112 98R C28 H70 SING N N 113 98R C28 H71 SING N N 114 98R C28 H72 SING N N 115 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 98R InChI InChI 1.03 "InChI=1S/C39H72O5/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-38(41)43-36-37(35-40)44-39(42)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h15-18,37,40H,3-14,19-36H2,1-2H3/b17-15?,18-16+/t37-/m0/s1" 98R InChIKey InChI 1.03 UGRFXJLWUONJDY-NVXOQYPQSA-N 98R SMILES_CANONICAL CACTVS 3.385 "CCCCCCCC=CCCCCCCCCC(=O)OC[C@H](CO)OC(=O)CCCCCCCC/C=C/CCCCCCC" 98R SMILES CACTVS 3.385 "CCCCCCCC=CCCCCCCCCC(=O)OC[CH](CO)OC(=O)CCCCCCCCC=CCCCCCCC" 98R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCC=CCCCCCCCCC(=O)OC[C@H](CO)OC(=O)CCCCCCCC/C=C/CCCCCCC" 98R SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCC=CCCCCCCCCC(=O)OCC(CO)OC(=O)CCCCCCCCC=CCCCCCCC" # _pdbx_chem_comp_identifier.comp_id 98R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{S})-2-[(~{E})-octadec-10-enoyl]oxy-3-oxidanyl-propyl] octadec-10-enoate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 98R "Create component" 2022-01-11 PDBJ 98R "Initial release" 2022-02-02 RCSB ##