data_99P # _chem_comp.id 99P _chem_comp.name "D-phenylalanyl-N-(pyridin-3-ylmethyl)-L-prolinamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H24 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-10-19 _chem_comp.pdbx_modified_date 2012-09-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 352.430 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 99P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3P17 _chem_comp.pdbx_subcomponent_list "DPN PRO 0YC" _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 99P N4 N4 N 0 1 N N N 16.385 -15.301 23.082 3.054 1.919 0.766 N DPN 1 99P C3 C3 C 0 1 N N R 17.699 -14.578 23.154 2.727 0.582 0.255 CA DPN 2 99P C5 C5 C 0 1 N N N 17.473 -13.179 22.557 1.292 0.557 -0.205 C DPN 3 99P O7 O7 O 0 1 N N N 16.557 -12.468 23.001 0.719 1.594 -0.461 O DPN 4 99P C2 C2 C 0 1 N N N 18.178 -14.505 24.615 3.646 0.247 -0.922 CB DPN 5 99P C1 C1 C 0 1 Y N N 19.611 -13.994 24.683 5.069 0.151 -0.437 CG DPN 6 99P C8 C8 C 0 1 Y N N 20.671 -14.666 24.063 5.872 1.276 -0.423 CD1 DPN 7 99P C12 C12 C 0 1 Y N N 19.878 -12.810 25.390 5.571 -1.061 0.000 CD2 DPN 8 99P C9 C9 C 0 1 Y N N 21.958 -14.160 24.154 7.178 1.188 0.022 CE1 DPN 9 99P C11 C11 C 0 1 Y N N 21.162 -12.304 25.482 6.876 -1.149 0.445 CE2 DPN 10 99P C10 C10 C 0 1 Y N N 22.209 -12.981 24.860 7.681 -0.025 0.454 CZ DPN 11 99P N6 N6 N 0 1 N N N 18.339 -12.783 21.565 0.646 -0.619 -0.331 N PRO 12 99P C13 C13 C 0 1 N N S 18.205 -11.432 20.992 -0.748 -0.788 -0.767 CA PRO 13 99P C14 C14 C 0 1 N N N 16.746 -11.311 20.468 -1.671 -0.051 0.169 C PRO 14 99P O15 O15 O 0 1 N N N 16.260 -12.193 19.720 -1.216 0.559 1.113 O PRO 15 99P C19 C19 C 0 1 N N N 19.194 -11.420 19.806 -1.059 -2.299 -0.735 CB PRO 16 99P C20 C20 C 0 1 N N N 20.239 -12.402 20.272 -0.002 -2.850 0.259 CG PRO 17 99P C21 C21 C 0 1 N N N 19.457 -13.536 20.949 1.221 -1.949 -0.060 CD PRO 18 99P N16 N16 N 0 1 N N N 16.087 -10.143 20.716 -3.002 -0.071 -0.043 N16 0YC 19 99P C17 C17 C 0 1 N N N 14.761 -9.876 20.181 -3.899 0.645 0.867 C17 0YC 20 99P C18 C18 C 0 1 Y N N 13.718 -10.435 21.091 -5.325 0.466 0.411 C18 0YC 21 99P C22 C22 C 0 1 Y N N 12.934 -9.622 21.887 -5.891 1.357 -0.481 C22 0YC 22 99P N23 N23 N 0 1 Y N N 11.973 -10.082 22.730 -7.137 1.206 -0.885 N23 0YC 23 99P C24 C24 C 0 1 Y N N 11.779 -11.419 22.785 -7.889 0.210 -0.459 C24 0YC 24 99P C25 C25 C 0 1 Y N N 12.517 -12.299 22.025 -7.391 -0.719 0.434 C25 0YC 25 99P C26 C26 C 0 1 Y N N 13.490 -11.794 21.177 -6.082 -0.597 0.877 C26 0YC 26 99P H4 H4 H 0 1 N N N 16.488 -16.220 23.462 3.991 1.945 1.140 H DPN 27 99P H5 H5 H 0 1 N N N 15.699 -14.798 23.608 2.932 2.620 0.050 H2 DPN 28 99P H3 H3 H 0 1 N N N 18.450 -15.112 22.553 2.868 -0.154 1.047 HA DPN 29 99P H1 H1 H 0 1 N N N 17.523 -13.822 25.177 3.345 -0.707 -1.357 HB2 DPN 30 99P H2 H2 H 0 1 N N N 18.130 -15.509 25.062 3.571 1.030 -1.676 HB3 DPN 31 99P H7 H7 H 0 1 N N N 20.486 -15.578 23.514 5.479 2.224 -0.761 HD1 DPN 32 99P H11 H11 H 0 1 N N N 19.066 -12.285 25.871 4.942 -1.939 -0.006 HD2 DPN 33 99P H8 H8 H 0 1 N N N 22.774 -14.681 23.675 7.805 2.067 0.032 HE1 DPN 34 99P H10 H10 H 0 1 N N N 21.351 -11.393 26.031 7.268 -2.096 0.787 HE2 DPN 35 99P H9 H9 H 0 1 N N N 23.215 -12.594 24.924 8.701 -0.093 0.801 HZ DPN 36 99P H12 H12 H 0 1 N N N 18.437 -10.639 21.719 -0.868 -0.407 -1.782 HA PRO 37 99P H16 H16 H 0 1 N N N 19.624 -10.419 19.652 -2.068 -2.475 -0.361 HB2 PRO 38 99P H17 H17 H 0 1 N N N 18.711 -11.758 18.877 -0.929 -2.744 -1.722 HB3 PRO 39 99P H18 H18 H 0 1 N N N 20.814 -12.787 19.417 -0.329 -2.719 1.290 HG2 PRO 40 99P H19 H19 H 0 1 N N N 20.924 -11.925 20.989 0.221 -3.896 0.051 HG3 PRO 41 99P H20 H20 H 0 1 N N N 19.093 -14.270 20.215 1.750 -2.325 -0.936 HD2 PRO 42 99P H21 H21 H 0 1 N N N 20.066 -14.048 21.709 1.891 -1.902 0.798 HD3 PRO 43 99P H13 H13 H 0 1 N N N 16.529 -9.448 21.283 -3.366 -0.559 -0.799 H13 0YC 44 99P H14 H14 H 0 1 N N N 14.618 -8.789 20.088 -3.787 0.247 1.875 H14 0YC 45 99P H15 H15 H 0 1 N N N 14.668 -10.344 19.190 -3.648 1.706 0.865 H15 0YC 46 99P H22 H22 H 0 1 N N N 13.095 -8.555 21.836 -5.306 2.186 -0.852 H22 0YC 47 99P H23 H23 H 0 1 N N N 11.020 -11.810 23.447 -8.906 0.120 -0.812 H23 0YC 48 99P H24 H24 H 0 1 N N N 12.341 -13.363 22.089 -8.011 -1.533 0.780 H24 0YC 49 99P H25 H25 H 0 1 N N N 14.077 -12.472 20.576 -5.665 -1.311 1.572 H25 0YC 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 99P O15 C14 DOUB N N 1 99P C19 C20 SING N N 2 99P C19 C13 SING N N 3 99P C17 N16 SING N N 4 99P C17 C18 SING N N 5 99P C20 C21 SING N N 6 99P C14 N16 SING N N 7 99P C14 C13 SING N N 8 99P C21 N6 SING N N 9 99P C13 N6 SING N N 10 99P C18 C26 DOUB Y N 11 99P C18 C22 SING Y N 12 99P C26 C25 SING Y N 13 99P N6 C5 SING N N 14 99P C22 N23 DOUB Y N 15 99P C25 C24 DOUB Y N 16 99P C5 O7 DOUB N N 17 99P C5 C3 SING N N 18 99P N23 C24 SING Y N 19 99P N4 C3 SING N N 20 99P C3 C2 SING N N 21 99P C8 C9 DOUB Y N 22 99P C8 C1 SING Y N 23 99P C9 C10 SING Y N 24 99P C2 C1 SING N N 25 99P C1 C12 DOUB Y N 26 99P C10 C11 DOUB Y N 27 99P C12 C11 SING Y N 28 99P C2 H1 SING N N 29 99P C2 H2 SING N N 30 99P C3 H3 SING N N 31 99P N4 H4 SING N N 32 99P N4 H5 SING N N 33 99P C8 H7 SING N N 34 99P C9 H8 SING N N 35 99P C10 H9 SING N N 36 99P C11 H10 SING N N 37 99P C12 H11 SING N N 38 99P C13 H12 SING N N 39 99P N16 H13 SING N N 40 99P C17 H14 SING N N 41 99P C17 H15 SING N N 42 99P C19 H16 SING N N 43 99P C19 H17 SING N N 44 99P C20 H18 SING N N 45 99P C20 H19 SING N N 46 99P C21 H20 SING N N 47 99P C21 H21 SING N N 48 99P C22 H22 SING N N 49 99P C24 H23 SING N N 50 99P C25 H24 SING N N 51 99P C26 H25 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 99P SMILES ACDLabs 12.01 "O=C(NCc1cccnc1)C3N(C(=O)C(N)Cc2ccccc2)CCC3" 99P InChI InChI 1.03 "InChI=1S/C20H24N4O2/c21-17(12-15-6-2-1-3-7-15)20(26)24-11-5-9-18(24)19(25)23-14-16-8-4-10-22-13-16/h1-4,6-8,10,13,17-18H,5,9,11-12,14,21H2,(H,23,25)/t17-,18+/m1/s1" 99P InChIKey InChI 1.03 KNPSDIKTQZBRCN-MSOLQXFVSA-N 99P SMILES_CANONICAL CACTVS 3.370 "N[C@H](Cc1ccccc1)C(=O)N2CCC[C@H]2C(=O)NCc3cccnc3" 99P SMILES CACTVS 3.370 "N[CH](Cc1ccccc1)C(=O)N2CCC[CH]2C(=O)NCc3cccnc3" 99P SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C[C@H](C(=O)N2CCC[C@H]2C(=O)NCc3cccnc3)N" 99P SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)CC(C(=O)N2CCCC2C(=O)NCc3cccnc3)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 99P "SYSTEMATIC NAME" ACDLabs 12.01 "D-phenylalanyl-N-(pyridin-3-ylmethyl)-L-prolinamide" 99P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-1-[(2R)-2-azanyl-3-phenyl-propanoyl]-N-(pyridin-3-ylmethyl)pyrrolidine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 99P "Create component" 2010-10-19 PDBJ 99P "Modify aromatic_flag" 2011-06-04 RCSB 99P "Modify descriptor" 2011-06-04 RCSB 99P "Modify subcomponent list" 2012-09-12 RCSB #