data_9CR # _chem_comp.id 9CR _chem_comp.name "(9cis)-retinoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H28 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-18 _chem_comp.pdbx_modified_date 2012-12-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 300.435 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9CR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1FM6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9CR C1 C1 C 0 1 N N N 21.829 10.874 18.290 4.043 0.306 -0.925 C1 9CR 1 9CR C2 C2 C 0 1 N N N 23.401 10.826 18.698 4.328 1.797 -1.115 C2 9CR 2 9CR C3 C3 C 0 1 N N N 24.405 11.675 17.800 4.661 2.408 0.251 C3 9CR 3 9CR C4 C4 C 0 1 N N N 24.126 11.462 16.316 3.395 2.394 1.111 C4 9CR 4 9CR C5 C5 C 0 1 N N N 22.678 11.894 15.900 2.772 1.029 1.091 C5 9CR 5 9CR C6 C6 C 0 1 N N N 21.533 11.632 16.814 3.055 0.106 0.187 C6 9CR 6 9CR C7 C7 C 0 1 N N N 20.132 11.990 16.576 2.388 -1.142 0.274 C7 9CR 7 9CR C8 C8 C 0 1 N N N 19.464 12.786 15.673 1.032 -1.193 0.221 C8 9CR 8 9CR C9 C9 C 0 1 N N N 18.095 12.896 15.277 0.373 -2.436 0.230 C9 9CR 9 9CR C10 C10 C 0 1 N N N 17.688 14.021 14.525 -0.989 -2.486 0.177 C10 9CR 10 9CR C11 C11 C 0 1 N N N 18.516 15.098 14.216 -1.733 -1.299 0.112 C11 9CR 11 9CR C12 C12 C 0 1 N N N 18.044 16.217 13.543 -3.096 -1.350 0.059 C12 9CR 12 9CR C13 C13 C 0 1 N N N 18.774 17.411 13.282 -3.841 -0.162 -0.006 C13 9CR 13 9CR C14 C14 C 0 1 N N N 18.084 18.398 12.592 -5.202 -0.213 -0.059 C14 9CR 14 9CR C15 C15 C 0 1 N N N 18.531 19.804 12.172 -5.944 0.966 -0.277 C15 9CR 15 9CR C16 C16 C 0 1 N N N 21.307 11.951 19.377 5.345 -0.420 -0.580 C16 9CR 16 9CR C17 C17 C 0 1 N N N 21.138 9.581 18.644 3.470 -0.271 -2.222 C17 9CR 17 9CR C18 C18 C 0 1 N N N 22.610 12.550 14.517 1.765 0.691 2.161 C18 9CR 18 9CR C19 C19 C 0 1 N N N 17.019 11.880 15.637 1.173 -3.711 0.300 C19 9CR 19 9CR C20 C20 C 0 1 N N N 20.264 17.632 13.771 -3.135 1.169 -0.016 C20 9CR 20 9CR O1 O1 O 0 1 N N N 18.100 20.271 11.112 -5.368 2.009 -0.529 O1 9CR 21 9CR O2 O2 O 0 1 N N N 19.325 20.451 12.903 -7.292 0.939 -0.206 O2 9CR 22 9CR H1 H1 H 0 1 N N N 23.724 9.775 18.654 5.174 1.925 -1.790 H1 9CR 23 9CR H2 H2 H 0 1 N N N 23.487 11.194 19.731 3.449 2.287 -1.534 H2 9CR 24 9CR H3 H3 H 0 1 N N N 25.436 11.363 18.020 5.439 1.818 0.736 H3 9CR 25 9CR H4 H4 H 0 1 N N N 24.286 12.742 18.039 5.006 3.433 0.119 H4 9CR 26 9CR H5 H5 H 0 1 N N N 24.254 10.394 16.084 3.653 2.658 2.137 H5 9CR 27 9CR H6 H6 H 0 1 N N N 24.849 12.053 15.734 2.684 3.120 0.719 H6 9CR 28 9CR H7 H7 H 0 1 N N N 19.462 11.515 17.278 2.959 -2.053 0.382 H7 9CR 29 9CR H8 H8 H 0 1 N N N 20.113 13.475 15.153 0.459 -0.279 0.171 H8 9CR 30 9CR H9 H9 H 0 1 N N N 16.670 14.048 14.167 -1.494 -3.441 0.184 H9 9CR 31 9CR H10 H10 H 0 1 N N N 19.555 15.061 14.508 -1.227 -0.345 0.105 H10 9CR 32 9CR H11 H11 H 0 1 N N N 17.026 16.178 13.183 -3.602 -2.304 0.067 H11 9CR 33 9CR H12 H12 H 0 1 N N N 17.076 18.135 12.307 -5.713 -1.156 0.066 H12 9CR 34 9CR H13 H13 H 0 1 N N N 21.456 11.551 20.391 6.063 -0.282 -1.388 H13 9CR 35 9CR H14 H14 H 0 1 N N N 21.873 12.888 19.266 5.755 -0.010 0.344 H14 9CR 36 9CR H15 H15 H 0 1 N N N 20.237 12.147 19.214 5.145 -1.483 -0.449 H15 9CR 37 9CR H16 H16 H 0 1 N N N 21.464 9.252 19.642 4.151 -0.058 -3.046 H16 9CR 38 9CR H17 H17 H 0 1 N N N 20.049 9.736 18.647 3.350 -1.349 -2.118 H17 9CR 39 9CR H18 H18 H 0 1 N N N 21.397 8.812 17.902 2.501 0.184 -2.425 H18 9CR 40 9CR H19 H19 H 0 1 N N N 21.569 12.826 14.292 1.595 1.565 2.789 H19 9CR 41 9CR H20 H20 H 0 1 N N N 23.239 13.453 14.508 0.827 0.390 1.695 H20 9CR 42 9CR H21 H21 H 0 1 N N N 22.974 11.842 13.757 2.146 -0.127 2.772 H21 9CR 43 9CR H22 H22 H 0 1 N N N 17.467 11.061 16.218 1.324 -3.989 1.343 H22 9CR 44 9CR H23 H23 H 0 1 N N N 16.238 12.370 16.237 0.633 -4.507 -0.213 H23 9CR 45 9CR H24 H24 H 0 1 N N N 16.574 11.475 14.716 2.140 -3.561 -0.180 H24 9CR 46 9CR H25 H25 H 0 1 N N N 20.617 16.730 14.293 -3.004 1.503 -1.045 H25 9CR 47 9CR H26 H26 H 0 1 N N N 20.909 17.829 12.902 -3.731 1.901 0.530 H26 9CR 48 9CR H27 H27 H 0 1 N N N 20.301 18.491 14.457 -2.160 1.068 0.460 H27 9CR 49 9CR H28 H28 H 0 1 N N N 19.506 21.295 12.506 -7.712 1.794 -0.370 H28 9CR 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9CR O1 C15 DOUB N N 1 9CR C15 C14 SING N N 2 9CR C15 O2 SING N N 3 9CR C14 C13 DOUB N E 4 9CR C13 C12 SING N N 5 9CR C13 C20 SING N N 6 9CR C12 C11 DOUB N E 7 9CR C11 C10 SING N N 8 9CR C18 C5 SING N N 9 9CR C10 C9 DOUB N Z 10 9CR C9 C19 SING N N 11 9CR C9 C8 SING N N 12 9CR C8 C7 DOUB N E 13 9CR C5 C4 SING N N 14 9CR C5 C6 DOUB N N 15 9CR C4 C3 SING N N 16 9CR C7 C6 SING N N 17 9CR C6 C1 SING N N 18 9CR C3 C2 SING N N 19 9CR C1 C17 SING N N 20 9CR C1 C2 SING N N 21 9CR C1 C16 SING N N 22 9CR C2 H1 SING N N 23 9CR C2 H2 SING N N 24 9CR C3 H3 SING N N 25 9CR C3 H4 SING N N 26 9CR C4 H5 SING N N 27 9CR C4 H6 SING N N 28 9CR C7 H7 SING N N 29 9CR C8 H8 SING N N 30 9CR C10 H9 SING N N 31 9CR C11 H10 SING N N 32 9CR C12 H11 SING N N 33 9CR C14 H12 SING N N 34 9CR C16 H13 SING N N 35 9CR C16 H14 SING N N 36 9CR C16 H15 SING N N 37 9CR C17 H16 SING N N 38 9CR C17 H17 SING N N 39 9CR C17 H18 SING N N 40 9CR C18 H19 SING N N 41 9CR C18 H20 SING N N 42 9CR C18 H21 SING N N 43 9CR C19 H22 SING N N 44 9CR C19 H23 SING N N 45 9CR C19 H24 SING N N 46 9CR C20 H25 SING N N 47 9CR C20 H26 SING N N 48 9CR C20 H27 SING N N 49 9CR O2 H28 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9CR SMILES ACDLabs 12.01 "O=C(O)\C=C(\C=C\C=C(/C=C/C1=C(C)CCCC1(C)C)C)C" 9CR InChI InChI 1.03 "InChI=1S/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/b9-6+,12-11+,15-8-,16-14+" 9CR InChIKey InChI 1.03 SHGAZHPCJJPHSC-ZVCIMWCZSA-N 9CR SMILES_CANONICAL CACTVS 3.370 "CC1=C(/C=C/C(C)=C\C=C\C(C)=C\C(O)=O)C(C)(C)CCC1" 9CR SMILES CACTVS 3.370 "CC1=C(C=CC(C)=CC=CC(C)=CC(O)=O)C(C)(C)CCC1" 9CR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC1=C(C(CCC1)(C)C)/C=C/C(=C\C=C\C(=C\C(=O)O)\C)/C" 9CR SMILES "OpenEye OEToolkits" 1.7.6 "CC1=C(C(CCC1)(C)C)C=CC(=CC=CC(=CC(=O)O)C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9CR "SYSTEMATIC NAME" ACDLabs 12.01 "(9cis)-retinoic acid" 9CR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2E,4E,6Z,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2,4,6,8-tetraenoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9CR "Create component" 2012-12-18 RCSB 9CR "Initial release" 2012-12-21 RCSB #