data_9GJ # _chem_comp.id 9GJ _chem_comp.name "N-{(1S)-1-[3-fluoro-4-(trifluoromethoxy)phenyl]-2-methoxyethyl}-7-methoxy-2-oxo-2,3-dihydropyrido[2,3-b]pyrazine-4(1H)-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H18 F4 N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-05-09 _chem_comp.pdbx_modified_date 2017-08-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 458.364 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9GJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5VP0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9GJ N1 N1 N 0 1 Y N N 26.963 5.367 25.619 -4.275 -1.001 -0.757 N1 9GJ 1 9GJ N3 N2 N 0 1 N N N 25.365 3.893 26.665 -2.502 0.406 -0.064 N3 9GJ 2 9GJ C4 C1 C 0 1 Y N N 28.131 5.886 28.041 -6.113 1.003 -0.351 C4 9GJ 3 9GJ C5 C2 C 0 1 Y N N 28.008 6.198 25.706 -5.551 -1.233 -1.007 C5 9GJ 4 9GJ C6 C3 C 0 1 Y N N 24.401 4.387 22.197 1.928 -1.152 0.280 C6 9GJ 5 9GJ C7 C4 C 0 1 Y N N 27.051 5.035 27.946 -4.766 1.214 -0.098 C7 9GJ 6 9GJ C8 C5 C 0 1 Y N N 23.509 6.359 20.484 4.480 -0.549 -0.606 C8 9GJ 7 9GJ C10 C6 C 0 1 Y N N 24.251 6.691 21.591 3.976 -1.835 -0.760 C10 9GJ 8 9GJ C13 C7 C 0 1 N N N 24.695 3.560 25.495 -1.685 -0.594 0.320 C13 9GJ 9 9GJ C15 C8 C 0 1 N N N 30.589 7.209 27.954 -8.142 -1.811 -1.552 C15 9GJ 10 9GJ C17 C9 C 0 1 N N N 25.947 2.467 22.407 0.572 -1.703 2.281 C17 9GJ 11 9GJ C1 C10 C 0 1 Y N N 23.656 4.062 21.076 2.426 0.128 0.429 C1 9GJ 12 9GJ C2 C11 C 0 1 Y N N 23.210 5.040 20.215 3.701 0.432 -0.013 C2 9GJ 13 9GJ C3 C12 C 0 1 Y N N 24.693 5.713 22.457 2.702 -2.134 -0.312 C3 9GJ 14 9GJ C9 C13 C 0 1 Y N N 28.629 6.489 26.899 -6.507 -0.249 -0.816 C9 9GJ 15 9GJ C11 C14 C 0 1 Y N N 26.469 4.782 26.722 -3.861 0.172 -0.318 C11 9GJ 16 9GJ C12 C15 C 0 1 N N N 25.404 3.750 29.227 -2.994 2.744 0.354 C12 9GJ 17 9GJ C14 C16 C 0 1 N N N 24.702 3.569 27.917 -1.996 1.776 -0.230 C14 9GJ 18 9GJ C16 C17 C 0 1 N N N 28.108 2.526 21.539 1.221 -0.666 4.342 C16 9GJ 19 9GJ C18 C18 C 0 1 N N S 24.860 3.279 23.082 0.540 -1.481 0.768 C18 9GJ 20 9GJ C19 C19 C 0 1 N N N 21.857 7.928 19.945 6.184 1.090 -0.854 C19 9GJ 21 9GJ N2 N3 N 0 1 N N N 26.588 4.432 29.118 -4.307 2.446 0.376 N2 9GJ 22 9GJ N4 N4 N 0 1 N N N 25.379 3.751 24.328 -0.363 -0.370 0.456 N4 9GJ 23 9GJ O1 O1 O 0 1 N N N 24.941 3.317 30.277 -2.610 3.801 0.808 O1 9GJ 24 9GJ O2 O2 O 0 1 N N N 23.558 3.121 25.481 -2.140 -1.699 0.545 O2 9GJ 25 9GJ O3 O3 O 0 1 N N N 29.700 7.375 26.855 -7.817 -0.502 -1.079 O3 9GJ 26 9GJ O4 O4 O 0 1 N N N 23.100 7.344 19.607 5.732 -0.252 -1.045 O4 9GJ 27 9GJ O5 O5 O 0 1 N N N 27.061 3.303 22.113 1.145 -0.560 2.919 O5 9GJ 28 9GJ F1 F1 F 0 1 N N N 24.548 7.974 21.830 4.732 -2.794 -1.337 F1 9GJ 29 9GJ F2 F2 F 0 1 N N N 21.781 8.388 21.214 6.183 1.392 0.512 F2 9GJ 30 9GJ F3 F3 F 0 1 N N N 20.890 7.013 19.725 7.482 1.221 -1.360 F3 9GJ 31 9GJ F4 F4 F 0 1 N N N 21.723 9.015 19.148 5.331 1.971 -1.527 F4 9GJ 32 9GJ H1 H1 H 0 1 N N N 28.586 6.081 29.001 -6.836 1.790 -0.193 H1 9GJ 33 9GJ H2 H2 H 0 1 N N N 28.379 6.659 24.803 -5.854 -2.206 -1.366 H2 9GJ 34 9GJ H3 H3 H 0 1 N N N 31.415 7.931 27.871 -9.217 -1.879 -1.722 H3 9GJ 35 9GJ H4 H4 H 0 1 N N N 30.045 7.381 28.895 -7.614 -2.001 -2.486 H4 9GJ 36 9GJ H5 H5 H 0 1 N N N 30.994 6.186 27.946 -7.844 -2.550 -0.809 H5 9GJ 37 9GJ H6 H6 H 0 1 N N N 25.556 2.038 21.473 -0.444 -1.853 2.648 H6 9GJ 38 9GJ H7 H7 H 0 1 N N N 26.266 1.655 23.077 1.173 -2.584 2.507 H7 9GJ 39 9GJ H8 H8 H 0 1 N N N 23.421 3.027 20.874 1.819 0.893 0.891 H8 9GJ 40 9GJ H9 H9 H 0 1 N N N 22.633 4.777 19.340 4.089 1.432 0.105 H9 9GJ 41 9GJ H10 H10 H 0 1 N N N 25.264 5.982 23.333 2.312 -3.135 -0.424 H10 9GJ 42 9GJ H11 H11 H 0 1 N N N 23.794 4.188 27.960 -1.043 1.878 0.289 H11 9GJ 43 9GJ H12 H12 H 0 1 N N N 24.420 2.508 27.857 -1.860 1.989 -1.290 H12 9GJ 44 9GJ H13 H13 H 0 1 N N N 28.966 3.176 21.314 1.667 0.241 4.751 H13 9GJ 45 9GJ H14 H14 H 0 1 N N N 28.416 1.745 22.249 0.219 -0.794 4.751 H14 9GJ 46 9GJ H15 H15 H 0 1 N N N 27.750 2.057 20.611 1.835 -1.525 4.610 H15 9GJ 47 9GJ H16 H16 H 0 1 N N N 24.006 2.613 23.275 0.186 -2.386 0.275 H16 9GJ 48 9GJ H17 H17 H 0 1 N N N 27.161 4.503 29.935 -4.941 3.093 0.723 H17 9GJ 49 9GJ H18 H18 H 0 1 N N N 26.257 4.229 24.345 -0.009 0.526 0.348 H18 9GJ 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9GJ F4 C19 SING N N 1 9GJ O4 C19 SING N N 2 9GJ O4 C8 SING N N 3 9GJ F3 C19 SING N N 4 9GJ C19 F2 SING N N 5 9GJ C2 C8 DOUB Y N 6 9GJ C2 C1 SING Y N 7 9GJ C8 C10 SING Y N 8 9GJ C1 C6 DOUB Y N 9 9GJ C16 O5 SING N N 10 9GJ C10 F1 SING N N 11 9GJ C10 C3 DOUB Y N 12 9GJ O5 C17 SING N N 13 9GJ C6 C3 SING Y N 14 9GJ C6 C18 SING N N 15 9GJ C17 C18 SING N N 16 9GJ C18 N4 SING N N 17 9GJ N4 C13 SING N N 18 9GJ O2 C13 DOUB N N 19 9GJ C13 N3 SING N N 20 9GJ N1 C5 DOUB Y N 21 9GJ N1 C11 SING Y N 22 9GJ C5 C9 SING Y N 23 9GJ N3 C11 SING N N 24 9GJ N3 C14 SING N N 25 9GJ C11 C7 DOUB Y N 26 9GJ O3 C9 SING N N 27 9GJ O3 C15 SING N N 28 9GJ C9 C4 DOUB Y N 29 9GJ C14 C12 SING N N 30 9GJ C7 C4 SING Y N 31 9GJ C7 N2 SING N N 32 9GJ N2 C12 SING N N 33 9GJ C12 O1 DOUB N N 34 9GJ C4 H1 SING N N 35 9GJ C5 H2 SING N N 36 9GJ C15 H3 SING N N 37 9GJ C15 H4 SING N N 38 9GJ C15 H5 SING N N 39 9GJ C17 H6 SING N N 40 9GJ C17 H7 SING N N 41 9GJ C1 H8 SING N N 42 9GJ C2 H9 SING N N 43 9GJ C3 H10 SING N N 44 9GJ C14 H11 SING N N 45 9GJ C14 H12 SING N N 46 9GJ C16 H13 SING N N 47 9GJ C16 H14 SING N N 48 9GJ C16 H15 SING N N 49 9GJ C18 H16 SING N N 50 9GJ N2 H17 SING N N 51 9GJ N4 H18 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9GJ SMILES ACDLabs 12.01 "n1cc(cc2NC(=O)CN(c12)C(NC(c3cc(c(cc3)OC(F)(F)F)F)COC)=O)OC" 9GJ InChI InChI 1.03 "InChI=1S/C19H18F4N4O5/c1-30-9-14(10-3-4-15(12(20)5-10)32-19(21,22)23)26-18(29)27-8-16(28)25-13-6-11(31-2)7-24-17(13)27/h3-7,14H,8-9H2,1-2H3,(H,25,28)(H,26,29)/t14-/m1/s1" 9GJ InChIKey InChI 1.03 AWJSRXUQLSPAOI-CQSZACIVSA-N 9GJ SMILES_CANONICAL CACTVS 3.385 "COC[C@@H](NC(=O)N1CC(=O)Nc2cc(OC)cnc12)c3ccc(OC(F)(F)F)c(F)c3" 9GJ SMILES CACTVS 3.385 "COC[CH](NC(=O)N1CC(=O)Nc2cc(OC)cnc12)c3ccc(OC(F)(F)F)c(F)c3" 9GJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "COC[C@H](c1ccc(c(c1)F)OC(F)(F)F)NC(=O)N2CC(=O)Nc3c2ncc(c3)OC" 9GJ SMILES "OpenEye OEToolkits" 2.0.6 "COCC(c1ccc(c(c1)F)OC(F)(F)F)NC(=O)N2CC(=O)Nc3c2ncc(c3)OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9GJ "SYSTEMATIC NAME" ACDLabs 12.01 "N-{(1S)-1-[3-fluoro-4-(trifluoromethoxy)phenyl]-2-methoxyethyl}-7-methoxy-2-oxo-2,3-dihydropyrido[2,3-b]pyrazine-4(1H)-carboxamide" 9GJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[(1~{S})-1-[3-fluoranyl-4-(trifluoromethyloxy)phenyl]-2-methoxy-ethyl]-7-methoxy-2-oxidanylidene-1,3-dihydropyrido[2,3-b]pyrazine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9GJ "Create component" 2017-05-09 RCSB 9GJ "Initial release" 2017-08-23 RCSB #