data_9HL # _chem_comp.id 9HL _chem_comp.name "N-{[(1R,2R)-2-(3-fluorophenyl)cyclopropyl]methyl}-2-[2-(1H-imidazol-1-yl)pyrimidin-4-yl]ethanamine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H20 F N5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2-(2-(1H-IMIDAZOL-1-YL)PYRIMIDIN-4-YL)-N-(2-(3-FLUOROPHENYL)CYCLOPROPYLMETHYL)ETHAN-1-AMINE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-10-21 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 337.394 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9HL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4v3z _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9HL N01 N01 N 0 1 Y N N 10.491 2.003 59.419 6.224 -2.829 -0.185 N01 9HL 1 9HL C02 C02 C 0 1 Y N N 11.692 2.068 58.780 5.291 -1.958 0.084 C02 9HL 2 9HL N03 N03 N 0 1 Y N N 12.542 1.537 59.672 5.737 -0.723 -0.272 N03 9HL 3 9HL C04 C04 C 0 1 Y N N 11.969 1.156 60.818 7.002 -0.884 -0.778 C04 9HL 4 9HL C05 C05 C 0 1 Y N N 10.625 1.451 60.651 7.283 -2.199 -0.715 C05 9HL 5 9HL "C1'" "C1'" C 0 1 Y N N 20.383 7.495 54.325 -5.237 -0.633 0.056 "C1'" 9HL 6 9HL N11 N11 N 0 1 Y N N 14.507 2.130 58.518 3.820 0.466 0.365 N11 9HL 7 9HL C12 C12 C 0 1 Y N N 13.875 1.418 59.485 5.040 0.478 -0.147 C12 9HL 8 9HL N13 N13 N 0 1 Y N N 14.592 0.598 60.293 5.615 1.602 -0.542 N13 9HL 9 9HL C14 C14 C 0 1 Y N N 15.919 0.466 60.157 4.983 2.759 -0.437 C14 9HL 10 9HL C15 C15 C 0 1 Y N N 16.587 1.187 59.172 3.703 2.784 0.095 C15 9HL 11 9HL C16 C16 C 0 1 Y N N 15.848 2.028 58.345 3.131 1.587 0.498 C16 9HL 12 9HL C17 C17 C 0 1 N N N 16.547 2.834 57.270 1.741 1.564 1.082 C17 9HL 13 9HL C18 C18 C 0 1 N N N 16.084 4.280 57.364 0.871 0.587 0.288 C18 9HL 14 9HL N19 N19 N 0 1 N N N 16.595 5.015 56.196 -0.483 0.565 0.857 N19 9HL 15 9HL "C2'" "C2'" C 0 1 Y N N 19.550 8.608 54.187 -5.883 -0.348 -1.132 "C2'" 9HL 16 9HL C20 C20 C 0 1 N N N 18.056 5.179 56.317 -1.349 -0.365 0.119 C20 9HL 17 9HL C21 C21 C 0 1 N N R 18.475 6.380 55.472 -2.747 -0.360 0.738 C21 9HL 18 9HL C22 C22 C 0 1 N N N 18.556 5.916 54.026 -3.246 -1.664 1.365 C22 9HL 19 9HL C23 C23 C 0 1 N N R 19.839 6.198 54.804 -3.833 -1.179 0.038 C23 9HL 20 9HL "C3'" "C3'" C 0 1 Y N N 20.060 9.826 53.736 -7.174 0.154 -1.115 "C3'" 9HL 21 9HL "C4'" "C4'" C 0 1 Y N N 21.413 9.927 53.419 -7.815 0.370 0.092 "C4'" 9HL 22 9HL "C5'" "C5'" C 0 1 Y N N 22.245 8.816 53.554 -7.168 0.084 1.279 "C5'" 9HL 23 9HL "C6'" "C6'" C 0 1 Y N N 21.733 7.600 53.999 -5.877 -0.412 1.261 "C6'" 9HL 24 9HL "F7'" "F7'" F 0 1 N N N 19.250 10.896 53.607 -7.806 0.434 -2.276 "F7'" 9HL 25 9HL H02 H02 H 0 1 N N N 11.908 2.453 57.794 4.327 -2.180 0.517 H02 9HL 26 9HL H04 H04 H 0 1 N N N 12.447 0.716 61.681 7.648 -0.105 -1.156 H04 9HL 27 9HL H05 H05 H 0 1 N N N 9.835 1.275 61.366 8.203 -2.666 -1.034 H05 9HL 28 9HL H14 H14 H 0 1 N N N 16.468 -0.197 60.809 5.458 3.673 -0.761 H14 9HL 29 9HL H15 H15 H 0 1 N N N 17.656 1.096 59.052 3.163 3.714 0.193 H15 9HL 30 9HL H17 H17 H 0 1 N N N 17.636 2.784 57.419 1.789 1.245 2.123 H17 9HL 31 9HL H17A H17A H 0 0 N N N 16.293 2.428 56.280 1.308 2.563 1.027 H17A 9HL 32 9HL H18 H18 H 0 1 N N N 14.985 4.317 57.373 0.823 0.907 -0.753 H18 9HL 33 9HL H18A H18A H 0 0 N N N 16.474 4.734 58.287 1.305 -0.411 0.343 H18A 9HL 34 9HL HN19 HN19 H 0 0 N N N 16.385 4.504 55.363 -0.459 0.335 1.839 HN19 9HL 35 9HL "H2'" "H2'" H 0 1 N N N 18.501 8.525 54.432 -5.381 -0.516 -2.074 "H2'" 9HL 36 9HL H20 H20 H 0 1 N N N 18.325 5.353 57.369 -1.412 -0.052 -0.924 H20 9HL 37 9HL H20A H20A H 0 0 N N N 18.563 4.273 55.953 -0.931 -1.370 0.172 H20A 9HL 38 9HL H21 H21 H 0 1 N N N 18.106 7.387 55.715 -3.049 0.573 1.213 H21 9HL 39 9HL H22 H22 H 0 1 N N N 18.288 4.882 53.765 -2.578 -2.525 1.335 H22 9HL 40 9HL H22A H22A H 0 0 N N N 18.246 6.591 53.214 -3.876 -1.588 2.251 H22A 9HL 41 9HL H23 H23 H 0 1 N N N 20.502 5.374 55.106 -3.551 -1.721 -0.865 H23 9HL 42 9HL "H4'" "H4'" H 0 1 N N N 21.817 10.865 53.069 -8.822 0.761 0.107 "H4'" 9HL 43 9HL "H5'" "H5'" H 0 1 N N N 23.294 8.899 53.312 -7.668 0.252 2.222 "H5'" 9HL 44 9HL "H6'" "H6'" H 0 1 N N N 22.381 6.741 54.091 -5.372 -0.636 2.189 "H6'" 9HL 45 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9HL N01 C02 DOUB Y N 1 9HL N01 C05 SING Y N 2 9HL C02 N03 SING Y N 3 9HL N03 C04 SING Y N 4 9HL N03 C12 SING N N 5 9HL C04 C05 DOUB Y N 6 9HL "C1'" "C2'" DOUB Y N 7 9HL "C1'" C23 SING N N 8 9HL "C1'" "C6'" SING Y N 9 9HL N11 C12 DOUB Y N 10 9HL N11 C16 SING Y N 11 9HL C12 N13 SING Y N 12 9HL N13 C14 DOUB Y N 13 9HL C14 C15 SING Y N 14 9HL C15 C16 DOUB Y N 15 9HL C16 C17 SING N N 16 9HL C17 C18 SING N N 17 9HL C18 N19 SING N N 18 9HL N19 C20 SING N N 19 9HL "C2'" "C3'" SING Y N 20 9HL C20 C21 SING N N 21 9HL C21 C22 SING N N 22 9HL C21 C23 SING N N 23 9HL C22 C23 SING N N 24 9HL "C3'" "C4'" DOUB Y N 25 9HL "C3'" "F7'" SING N N 26 9HL "C4'" "C5'" SING Y N 27 9HL "C5'" "C6'" DOUB Y N 28 9HL C02 H02 SING N N 29 9HL C04 H04 SING N N 30 9HL C05 H05 SING N N 31 9HL C14 H14 SING N N 32 9HL C15 H15 SING N N 33 9HL C17 H17 SING N N 34 9HL C17 H17A SING N N 35 9HL C18 H18 SING N N 36 9HL C18 H18A SING N N 37 9HL N19 HN19 SING N N 38 9HL "C2'" "H2'" SING N N 39 9HL C20 H20 SING N N 40 9HL C20 H20A SING N N 41 9HL C21 H21 SING N N 42 9HL C22 H22 SING N N 43 9HL C22 H22A SING N N 44 9HL C23 H23 SING N N 45 9HL "C4'" "H4'" SING N N 46 9HL "C5'" "H5'" SING N N 47 9HL "C6'" "H6'" SING N N 48 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9HL SMILES ACDLabs 12.01 "Fc1cccc(c1)C2CC2CNCCc3nc(ncc3)n4ccnc4" 9HL InChI InChI 1.03 "InChI=1S/C19H20FN5/c20-16-3-1-2-14(10-16)18-11-15(18)12-21-6-4-17-5-7-23-19(24-17)25-9-8-22-13-25/h1-3,5,7-10,13,15,18,21H,4,6,11-12H2/t15-,18-/m0/s1" 9HL InChIKey InChI 1.03 GLFSJKKKONEYJI-YJBOKZPZSA-N 9HL SMILES_CANONICAL CACTVS 3.385 "Fc1cccc(c1)[C@@H]2C[C@H]2CNCCc3ccnc(n3)n4ccnc4" 9HL SMILES CACTVS 3.385 "Fc1cccc(c1)[CH]2C[CH]2CNCCc3ccnc(n3)n4ccnc4" 9HL SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(cc(c1)F)[C@@H]2C[C@H]2CNCCc3ccnc(n3)n4ccnc4" 9HL SMILES "OpenEye OEToolkits" 1.7.6 "c1cc(cc(c1)F)C2CC2CNCCc3ccnc(n3)n4ccnc4" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9HL "SYSTEMATIC NAME" ACDLabs 12.01 "N-{[(1R,2R)-2-(3-fluorophenyl)cyclopropyl]methyl}-2-[2-(1H-imidazol-1-yl)pyrimidin-4-yl]ethanamine" 9HL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N-[[(1R,2R)-2-(3-fluorophenyl)cyclopropyl]methyl]-2-(2-imidazol-1-ylpyrimidin-4-yl)ethanamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9HL "Create component" 2014-10-21 EBI 9HL "Modify synonyms" 2014-10-30 EBI 9HL "Initial release" 2014-12-24 RCSB 9HL "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 9HL _pdbx_chem_comp_synonyms.name "2-(2-(1H-IMIDAZOL-1-YL)PYRIMIDIN-4-YL)-N-(2-(3-FLUOROPHENYL)CYCLOPROPYLMETHYL)ETHAN-1-AMINE" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##