data_9I4 # _chem_comp.id 9I4 _chem_comp.name "(2-{[3-({4-[2-(3-{[3-(carboxymethyl)-5-methyl-1-benzofuran-2-yl]ethynyl}benzamido)ethyl]piperazin-1-yl}methyl)phenyl]ethynyl}-5-methyl-1-benzofuran-3-yl)acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C46 H41 N3 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-13 _chem_comp.pdbx_modified_date 2022-10-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 747.834 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9I4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7SIA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9I4 C10 C1 C 0 1 N N N 0.006 20.665 -14.273 -4.475 -3.010 1.719 C10 9I4 1 9I4 C13 C2 C 0 1 Y N N 0.703 19.798 -10.526 -7.835 -2.483 0.057 C13 9I4 2 9I4 C15 C3 C 0 1 N N N 1.421 17.815 -8.737 -9.603 -0.588 -0.222 C15 9I4 3 9I4 C17 C4 C 0 1 Y N N 1.251 16.374 -6.497 -10.472 1.704 0.149 C17 9I4 4 9I4 C22 C5 C 0 1 Y N N 2.097 15.323 -5.962 -11.682 2.415 -0.261 C22 9I4 5 9I4 C24 C6 C 0 1 Y N N 3.035 13.594 -4.570 -13.373 4.073 -0.588 C24 9I4 6 9I4 C26 C7 C 0 1 Y N N 4.076 13.440 -5.498 -14.114 3.167 -1.333 C26 9I4 7 9I4 C28 C8 C 0 1 Y N N 3.104 15.173 -6.862 -12.431 1.492 -1.015 C28 9I4 8 9I4 C02 C9 C 0 1 N N N 2.090 22.058 -22.906 3.776 -0.950 -0.834 C02 9I4 9 9I4 C04 C10 C 0 1 N N N 1.089 22.280 -20.428 1.505 -1.737 -0.433 C04 9I4 10 9I4 C05 C11 C 0 1 N N N 0.659 23.249 -19.287 0.228 -1.987 -1.237 C05 9I4 11 9I4 C07 C12 C 0 1 N N N 1.358 23.121 -16.854 -1.223 -1.455 0.628 C07 9I4 12 9I4 C08 C13 C 0 1 N N N 1.280 22.304 -15.539 -2.261 -2.037 1.590 C08 9I4 13 9I4 C11 C14 C 0 1 Y N N 0.179 20.773 -12.728 -5.733 -3.256 0.927 C11 9I4 14 9I4 C12 C15 C 0 1 Y N N 0.550 19.666 -11.923 -6.667 -2.250 0.789 C12 9I4 15 9I4 C14 C16 C 0 1 N N N 1.103 18.655 -9.552 -8.807 -1.442 -0.096 C14 9I4 16 9I4 C16 C17 C 0 1 Y N N 1.877 16.744 -7.721 -10.575 0.452 -0.375 C16 9I4 17 9I4 C18 C18 C 0 1 N N N -0.051 16.908 -5.842 -9.337 2.248 0.978 C18 9I4 18 9I4 C19 C19 C 0 1 N N N -1.151 15.853 -5.945 -9.615 1.994 2.438 C19 9I4 19 9I4 C23 C20 C 0 1 Y N N 2.028 14.543 -4.794 -12.168 3.708 -0.054 C23 9I4 20 9I4 C25 C21 C 0 1 N N N 3.003 12.722 -3.311 -13.898 5.468 -0.367 C25 9I4 21 9I4 C27 C22 C 0 1 Y N N 4.124 14.227 -6.654 -13.651 1.885 -1.547 C27 9I4 22 9I4 C30 C23 C 0 1 Y N N 0.476 21.060 -9.952 -8.048 -3.734 -0.528 C30 9I4 23 9I4 C31 C24 C 0 1 Y N N 0.111 22.148 -10.738 -7.108 -4.731 -0.376 C31 9I4 24 9I4 C32 C25 C 0 1 Y N N -0.041 22.013 -12.114 -5.956 -4.496 0.354 C32 9I4 25 9I4 C33 C26 C 0 1 N N N -1.089 21.828 -16.103 -3.025 -3.542 -0.146 C33 9I4 26 9I4 C34 C27 C 0 1 N N N -0.890 22.665 -17.388 -1.987 -2.960 -1.107 C34 9I4 27 9I4 C35 C28 C 0 1 Y N N 2.474 22.636 -24.290 4.835 -0.449 -1.735 C35 9I4 28 9I4 C36 C29 C 0 1 Y N N 3.388 22.018 -25.173 6.097 -0.148 -1.229 C36 9I4 29 9I4 C37 C30 C 0 1 Y N N 3.694 22.598 -26.426 7.092 0.324 -2.087 C37 9I4 30 9I4 C38 C31 C 0 1 N N N 4.649 22.031 -27.470 8.392 0.636 -1.575 C38 9I4 31 9I4 C39 C32 C 0 1 N N N 5.403 21.691 -28.289 9.459 0.892 -1.156 C39 9I4 32 9I4 C40 C33 C 0 1 Y N N 6.432 21.267 -29.295 10.760 1.204 -0.645 C40 9I4 33 9I4 C41 C34 C 0 1 Y N N 6.730 21.898 -30.575 11.142 1.074 0.654 C41 9I4 34 9I4 C42 C35 C 0 1 N N N 6.152 23.156 -31.302 10.296 0.592 1.804 C42 9I4 35 9I4 C43 C36 C 0 1 N N N 7.225 24.325 -31.247 10.429 -0.904 1.932 C43 9I4 36 9I4 C46 C37 C 0 1 Y N N 7.777 21.028 -31.036 12.542 1.498 0.708 C46 9I4 37 9I4 C47 C38 C 0 1 Y N N 8.441 21.187 -32.259 13.489 1.598 1.729 C47 9I4 38 9I4 C48 C39 C 0 1 Y N N 9.426 20.179 -32.449 14.749 2.044 1.442 C48 9I4 39 9I4 C49 C40 C 0 1 N N N 10.302 20.166 -33.783 15.774 2.151 2.542 C49 9I4 40 9I4 C50 C41 C 0 1 Y N N 9.661 19.159 -31.474 15.091 2.398 0.145 C50 9I4 41 9I4 C51 C42 C 0 1 Y N N 8.926 19.087 -30.254 14.169 2.307 -0.877 C51 9I4 42 9I4 C52 C43 C 0 1 Y N N 7.986 20.106 -30.150 12.883 1.856 -0.609 C52 9I4 43 9I4 C54 C44 C 0 1 Y N N 3.078 23.789 -26.761 6.814 0.492 -3.447 C54 9I4 44 9I4 C55 C45 C 0 1 Y N N 2.181 24.396 -25.900 5.561 0.191 -3.941 C55 9I4 45 9I4 C56 C46 C 0 1 Y N N 1.878 23.819 -24.671 4.575 -0.282 -3.098 C56 9I4 46 9I4 N03 N1 N 0 1 N N N 1.458 22.899 -21.786 2.555 -1.241 -1.326 N03 9I4 47 9I4 N06 N2 N 0 1 N N N 0.481 22.576 -17.920 -0.825 -2.485 -0.342 N06 9I4 48 9I4 N09 N3 N 0 1 N N N -0.062 21.951 -15.022 -3.422 -2.512 0.824 N09 9I4 49 9I4 O01 O1 O 0 1 N N N 2.294 20.916 -22.702 4.005 -1.099 0.350 O01 9I4 50 9I4 O20 O2 O 0 1 N N N -1.606 15.278 -4.919 -8.734 2.396 3.368 O20 9I4 51 9I4 O21 O3 O 0 1 N N N -1.594 15.547 -7.079 -10.630 1.430 2.770 O21 9I4 52 9I4 O29 O4 O 0 1 Y N N 2.962 16.012 -7.878 -11.735 0.338 -1.053 O29 9I4 53 9I4 O44 O5 O 0 1 N N N 7.608 24.742 -30.122 9.760 -1.557 2.895 O44 9I4 54 9I4 O45 O6 O 0 1 N N N 7.718 24.838 -32.325 11.137 -1.515 1.168 O45 9I4 55 9I4 O53 O7 O 0 1 Y N N 7.216 20.197 -29.086 11.793 1.665 -1.380 O53 9I4 56 9I4 H101 H1 H 0 0 N N N -0.926 20.114 -14.468 -4.673 -2.270 2.495 H101 9I4 57 9I4 H102 H2 H 0 0 N N N 0.859 20.093 -14.666 -4.149 -3.941 2.182 H102 9I4 58 9I4 H261 H3 H 0 0 N N N 4.848 12.707 -5.318 -15.063 3.469 -1.750 H261 9I4 59 9I4 H042 H4 H 0 0 N N N 0.255 21.583 -20.600 1.307 -0.997 0.342 H042 9I4 60 9I4 H041 H5 H 0 0 N N N 1.967 21.721 -20.072 1.831 -2.669 0.029 H041 9I4 61 9I4 H051 H6 H 0 0 N N N 1.429 24.029 -19.189 -0.099 -1.056 -1.699 H051 9I4 62 9I4 H052 H7 H 0 0 N N N -0.298 23.712 -19.570 0.426 -2.728 -2.012 H052 9I4 63 9I4 H072 H8 H 0 0 N N N 2.397 23.110 -17.214 -1.653 -0.605 0.099 H072 9I4 64 9I4 H071 H9 H 0 0 N N N 1.054 24.157 -16.643 -0.348 -1.128 1.191 H071 9I4 65 9I4 H082 H10 H 0 0 N N N 1.825 21.363 -15.705 -1.822 -2.871 2.138 H082 9I4 66 9I4 H081 H11 H 0 0 N N N 1.788 22.890 -14.759 -2.579 -1.266 2.292 H081 9I4 67 9I4 H121 H12 H 0 0 N N N 0.718 18.705 -12.387 -6.495 -1.286 1.243 H121 9I4 68 9I4 H181 H13 H 0 0 N N N 0.139 17.135 -4.783 -8.409 1.752 0.693 H181 9I4 69 9I4 H182 H14 H 0 0 N N N -0.372 17.823 -6.361 -9.244 3.320 0.807 H182 9I4 70 9I4 H231 H15 H 0 0 N N N 1.221 14.672 -4.088 -11.594 4.417 0.525 H231 9I4 71 9I4 H253 H16 H 0 0 N N N 3.553 13.225 -2.502 -14.500 5.490 0.541 H253 9I4 72 9I4 H252 H17 H 0 0 N N N 1.959 12.564 -3.001 -13.061 6.159 -0.265 H252 9I4 73 9I4 H251 H18 H 0 0 N N N 3.473 11.751 -3.526 -14.512 5.764 -1.218 H251 9I4 74 9I4 H271 H19 H 0 0 N N N 4.925 14.111 -7.369 -14.238 1.189 -2.128 H271 9I4 75 9I4 H301 H20 H 0 0 N N N 0.586 21.187 -8.885 -8.947 -3.920 -1.098 H301 9I4 76 9I4 H311 H21 H 0 0 N N N -0.056 23.109 -10.274 -7.271 -5.699 -0.828 H311 9I4 77 9I4 H321 H22 H 0 0 N N N -0.329 22.866 -12.710 -5.221 -5.279 0.465 H321 9I4 78 9I4 H332 H23 H 0 0 N N N -2.057 22.118 -15.670 -3.899 -3.868 -0.708 H332 9I4 79 9I4 H331 H24 H 0 0 N N N -1.124 20.770 -16.403 -2.595 -4.393 0.383 H331 9I4 80 9I4 H342 H25 H 0 0 N N N -1.111 23.718 -17.159 -1.669 -3.731 -1.810 H342 9I4 81 9I4 H341 H26 H 0 0 N N N -1.589 22.302 -18.156 -2.426 -2.127 -1.656 H341 9I4 82 9I4 H361 H27 H 0 0 N N N 3.860 21.089 -24.887 6.305 -0.278 -0.177 H361 9I4 83 9I4 H422 H28 H 0 0 N N N 5.228 23.480 -30.800 10.632 1.066 2.726 H422 9I4 84 9I4 H421 H29 H 0 0 N N N 5.932 22.907 -32.351 9.253 0.850 1.621 H421 9I4 85 9I4 H471 H30 H 0 0 N N N 8.232 21.975 -32.967 13.228 1.324 2.740 H471 9I4 86 9I4 H491 H31 H 0 0 N N N 11.211 20.766 -33.631 16.321 1.212 2.623 H491 9I4 87 9I4 H493 H32 H 0 0 N N N 10.583 19.131 -34.027 16.470 2.958 2.313 H493 9I4 88 9I4 H492 H33 H 0 0 N N N 9.716 20.592 -34.611 15.272 2.361 3.487 H492 9I4 89 9I4 H501 H34 H 0 0 N N N 10.422 18.417 -31.669 16.090 2.749 -0.067 H501 9I4 90 9I4 H511 H35 H 0 0 N N N 9.081 18.330 -29.500 14.446 2.586 -1.882 H511 9I4 91 9I4 H541 H36 H 0 0 N N N 3.300 24.253 -27.710 7.582 0.857 -4.113 H541 9I4 92 9I4 H551 H37 H 0 0 N N N 1.712 25.326 -26.185 5.352 0.322 -4.992 H551 9I4 93 9I4 H561 H38 H 0 0 N N N 1.172 24.301 -24.011 3.596 -0.515 -3.491 H561 9I4 94 9I4 H031 H39 H 0 0 N N N 1.283 23.871 -21.944 2.372 -1.121 -2.271 H031 9I4 95 9I4 H3 H42 H 0 1 N N N -2.269 14.648 -5.176 -8.956 2.211 4.291 H3 9I4 96 9I4 H4 H43 H 0 1 N N N 8.255 25.427 -30.241 9.876 -2.516 2.937 H4 9I4 97 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9I4 C49 C48 SING N N 1 9I4 C48 C47 DOUB Y N 2 9I4 C48 C50 SING Y N 3 9I4 O45 C43 DOUB N N 4 9I4 C47 C46 SING Y N 5 9I4 C50 C51 DOUB Y N 6 9I4 C42 C43 SING N N 7 9I4 C42 C41 SING N N 8 9I4 C43 O44 SING N N 9 9I4 C46 C41 SING Y N 10 9I4 C46 C52 DOUB Y N 11 9I4 C41 C40 DOUB Y N 12 9I4 C51 C52 SING Y N 13 9I4 C52 O53 SING Y N 14 9I4 C40 O53 SING Y N 15 9I4 C40 C39 SING N N 16 9I4 C39 C38 TRIP N N 17 9I4 C38 C37 SING N N 18 9I4 C54 C37 DOUB Y N 19 9I4 C54 C55 SING Y N 20 9I4 C37 C36 SING Y N 21 9I4 C55 C56 DOUB Y N 22 9I4 C36 C35 DOUB Y N 23 9I4 C56 C35 SING Y N 24 9I4 C35 C02 SING N N 25 9I4 C02 O01 DOUB N N 26 9I4 C02 N03 SING N N 27 9I4 N03 C04 SING N N 28 9I4 C04 C05 SING N N 29 9I4 C05 N06 SING N N 30 9I4 N06 C34 SING N N 31 9I4 N06 C07 SING N N 32 9I4 C34 C33 SING N N 33 9I4 C07 C08 SING N N 34 9I4 C33 N09 SING N N 35 9I4 C08 N09 SING N N 36 9I4 N09 C10 SING N N 37 9I4 C10 C11 SING N N 38 9I4 C11 C32 DOUB Y N 39 9I4 C11 C12 SING Y N 40 9I4 C32 C31 SING Y N 41 9I4 C12 C13 DOUB Y N 42 9I4 C31 C30 DOUB Y N 43 9I4 C13 C30 SING Y N 44 9I4 C13 C14 SING N N 45 9I4 C14 C15 TRIP N N 46 9I4 C15 C16 SING N N 47 9I4 O29 C16 SING Y N 48 9I4 O29 C28 SING Y N 49 9I4 C16 C17 DOUB Y N 50 9I4 O21 C19 DOUB N N 51 9I4 C28 C27 DOUB Y N 52 9I4 C28 C22 SING Y N 53 9I4 C27 C26 SING Y N 54 9I4 C17 C22 SING Y N 55 9I4 C17 C18 SING N N 56 9I4 C22 C23 DOUB Y N 57 9I4 C19 C18 SING N N 58 9I4 C19 O20 SING N N 59 9I4 C26 C24 DOUB Y N 60 9I4 C23 C24 SING Y N 61 9I4 C24 C25 SING N N 62 9I4 C10 H101 SING N N 63 9I4 C10 H102 SING N N 64 9I4 C26 H261 SING N N 65 9I4 C04 H042 SING N N 66 9I4 C04 H041 SING N N 67 9I4 C05 H051 SING N N 68 9I4 C05 H052 SING N N 69 9I4 C07 H072 SING N N 70 9I4 C07 H071 SING N N 71 9I4 C08 H082 SING N N 72 9I4 C08 H081 SING N N 73 9I4 C12 H121 SING N N 74 9I4 C18 H181 SING N N 75 9I4 C18 H182 SING N N 76 9I4 C23 H231 SING N N 77 9I4 C25 H253 SING N N 78 9I4 C25 H252 SING N N 79 9I4 C25 H251 SING N N 80 9I4 C27 H271 SING N N 81 9I4 C30 H301 SING N N 82 9I4 C31 H311 SING N N 83 9I4 C32 H321 SING N N 84 9I4 C33 H332 SING N N 85 9I4 C33 H331 SING N N 86 9I4 C34 H342 SING N N 87 9I4 C34 H341 SING N N 88 9I4 C36 H361 SING N N 89 9I4 C42 H422 SING N N 90 9I4 C42 H421 SING N N 91 9I4 C47 H471 SING N N 92 9I4 C49 H491 SING N N 93 9I4 C49 H493 SING N N 94 9I4 C49 H492 SING N N 95 9I4 C50 H501 SING N N 96 9I4 C51 H511 SING N N 97 9I4 C54 H541 SING N N 98 9I4 C55 H551 SING N N 99 9I4 C56 H561 SING N N 100 9I4 N03 H031 SING N N 101 9I4 O20 H3 SING N N 102 9I4 O44 H4 SING N N 103 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9I4 SMILES ACDLabs 12.01 "O=C(O)Cc1c2cc(C)ccc2oc1C#Cc1cccc(c1)C(=O)NCCN1CCN(CC1)Cc1cccc(c1)C#Cc1oc2ccc(C)cc2c1CC(=O)O" 9I4 InChI InChI 1.03 "InChI=1S/C46H41N3O7/c1-30-9-13-40-36(23-30)38(27-44(50)51)42(55-40)15-11-32-5-3-7-34(25-32)29-49-21-19-48(20-22-49)18-17-47-46(54)35-8-4-6-33(26-35)12-16-43-39(28-45(52)53)37-24-31(2)10-14-41(37)56-43/h3-10,13-14,23-26H,17-22,27-29H2,1-2H3,(H,47,54)(H,50,51)(H,52,53)" 9I4 InChIKey InChI 1.03 PBDFKGPSHQGUAI-UHFFFAOYSA-N 9I4 SMILES_CANONICAL CACTVS 3.385 "Cc1ccc2oc(C#Cc3cccc(CN4CCN(CCNC(=O)c5cccc(c5)C#Cc6oc7ccc(C)cc7c6CC(O)=O)CC4)c3)c(CC(O)=O)c2c1" 9I4 SMILES CACTVS 3.385 "Cc1ccc2oc(C#Cc3cccc(CN4CCN(CCNC(=O)c5cccc(c5)C#Cc6oc7ccc(C)cc7c6CC(O)=O)CC4)c3)c(CC(O)=O)c2c1" 9I4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc2c(c1)c(c(o2)C#Cc3cccc(c3)CN4CCN(CC4)CCNC(=O)c5cccc(c5)C#Cc6c(c7cc(ccc7o6)C)CC(=O)O)CC(=O)O" 9I4 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc2c(c1)c(c(o2)C#Cc3cccc(c3)CN4CCN(CC4)CCNC(=O)c5cccc(c5)C#Cc6c(c7cc(ccc7o6)C)CC(=O)O)CC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9I4 "SYSTEMATIC NAME" ACDLabs 12.01 "(2-{[3-({4-[2-(3-{[3-(carboxymethyl)-5-methyl-1-benzofuran-2-yl]ethynyl}benzamido)ethyl]piperazin-1-yl}methyl)phenyl]ethynyl}-5-methyl-1-benzofuran-3-yl)acetic acid" 9I4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[2-[2-[3-[[4-[2-[[3-[2-[3-(2-hydroxy-2-oxoethyl)-5-methyl-1-benzofuran-2-yl]ethynyl]phenyl]carbonylamino]ethyl]piperazin-1-yl]methyl]phenyl]ethynyl]-5-methyl-1-benzofuran-3-yl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9I4 "Create component" 2021-10-13 RCSB 9I4 "Initial release" 2022-10-19 RCSB #