data_9IY # _chem_comp.id 9IY _chem_comp.name "[(2~{R},3~{S},4~{R},5~{S})-3,4-bis(oxidanyl)-5-[4-[[[4-(phenylsulfonyl)phenyl]carbamoylamino]methyl]phenyl]oxolan-2-yl]methyl dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H27 N2 O10 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-11-15 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 578.528 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9IY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7Q8T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9IY N1 N1 N 0 1 N N N -15.792 -9.407 -0.477 -0.782 1.292 -0.488 N1 9IY 1 9IY C2 C1 C 0 1 Y N N -13.558 -7.205 -3.463 -4.704 -1.053 -1.504 C2 9IY 2 9IY C4 C2 C 0 1 Y N N -13.385 -5.071 -4.525 -6.881 -0.160 -1.063 C4 9IY 3 9IY C5 C3 C 0 1 Y N N -13.430 -3.842 -7.045 -8.990 -0.873 0.695 C5 9IY 4 9IY C6 C4 C 0 1 Y N N -14.634 -3.157 -7.040 -9.259 0.082 1.657 C6 9IY 5 9IY C7 C5 C 0 1 Y N N -15.362 -3.066 -8.215 -9.544 -0.305 2.954 C7 9IY 6 9IY C9 C6 C 0 1 Y N N -13.704 -4.344 -9.365 -9.304 -2.602 2.322 C9 9IY 7 9IY C10 C7 C 0 1 Y N N -12.954 -4.436 -8.205 -9.012 -2.215 1.027 C10 9IY 8 9IY C12 C8 C 0 1 Y N N -15.205 -5.513 -3.034 -4.956 1.251 -0.866 C12 9IY 9 9IY C13 C9 C 0 1 N N N -15.481 -10.653 0.212 -0.097 2.193 0.442 C13 9IY 10 9IY O7 O1 O 0 1 N N N -14.765 -13.899 9.819 9.669 -3.459 0.409 O7 9IY 11 9IY P P1 P 0 1 N N N -13.309 -13.837 9.501 8.193 -3.321 -0.219 P 9IY 12 9IY O5 O2 O 0 1 N N N -12.537 -12.813 10.309 8.143 -4.074 -1.642 O5 9IY 13 9IY O6 O3 O 0 1 N N N -12.554 -15.160 9.650 7.207 -3.935 0.698 O6 9IY 14 9IY O4 O4 O 0 1 N N N -13.169 -13.332 7.968 7.840 -1.764 -0.423 O4 9IY 15 9IY C20 C10 C 0 1 N N N -13.881 -12.142 7.561 7.700 -0.849 0.666 C20 9IY 16 9IY C19 C11 C 0 1 N N R -12.874 -11.106 7.141 7.364 0.542 0.123 C19 9IY 17 9IY O3 O5 O 0 1 N N N -12.358 -11.450 5.836 6.039 0.558 -0.449 O3 9IY 18 9IY C21 C12 C 0 1 N N S -13.406 -9.685 7.001 7.276 1.572 1.278 C21 9IY 19 9IY O8 O6 O 0 1 N N N -13.349 -8.990 8.243 8.565 2.109 1.582 O8 9IY 20 9IY C22 C13 C 0 1 N N R -12.440 -9.087 5.982 6.353 2.658 0.675 C22 9IY 21 9IY O9 O7 O 0 1 N N N -11.219 -8.700 6.601 7.127 3.738 0.150 O9 9IY 22 9IY C18 C14 C 0 1 N N S -12.214 -10.267 5.025 5.604 1.928 -0.463 C18 9IY 23 9IY C17 C15 C 0 1 Y N N -13.120 -10.326 3.818 4.118 1.997 -0.227 C17 9IY 24 9IY C16 C16 C 0 1 Y N N -12.886 -9.493 2.732 3.350 2.917 -0.917 C16 9IY 25 9IY C15 C17 C 0 1 Y N N -13.657 -9.579 1.587 1.987 2.980 -0.701 C15 9IY 26 9IY C23 C18 C 0 1 Y N N -14.167 -11.233 3.728 3.520 1.135 0.674 C23 9IY 27 9IY C24 C19 C 0 1 Y N N -14.941 -11.317 2.584 2.156 1.199 0.891 C24 9IY 28 9IY C14 C20 C 0 1 Y N N -14.691 -10.498 1.490 1.390 2.123 0.206 C14 9IY 29 9IY C C21 C 0 1 N N N -14.985 -8.887 -1.436 -2.126 1.192 -0.463 C 9IY 30 9IY O O8 O 0 1 N N N -13.971 -9.464 -1.827 -2.769 1.850 0.331 O 9IY 31 9IY N N2 N 0 1 N N N -15.359 -7.632 -1.859 -2.756 0.363 -1.319 N 9IY 32 9IY C1 C22 C 0 1 Y N N -14.704 -6.789 -2.794 -4.141 0.187 -1.230 C1 9IY 33 9IY C11 C23 C 0 1 Y N N -14.541 -4.648 -3.887 -6.324 1.076 -0.790 C11 9IY 34 9IY C3 C24 C 0 1 Y N N -12.902 -6.353 -4.331 -6.072 -1.222 -1.420 C3 9IY 35 9IY S S1 S 0 1 N N N -12.490 -3.954 -5.558 -8.626 -0.380 -0.957 S 9IY 36 9IY O1 O9 O 0 1 N N N -12.496 -2.662 -4.928 -9.205 0.906 -1.129 O1 9IY 37 9IY O2 O10 O 0 1 N N N -11.226 -4.559 -5.875 -8.941 -1.491 -1.786 O2 9IY 38 9IY C8 C25 C 0 1 Y N N -14.902 -3.662 -9.370 -9.560 -1.646 3.287 C8 9IY 39 9IY H1 H1 H 0 1 N N N -16.630 -8.918 -0.234 -0.268 0.770 -1.124 H1 9IY 40 9IY H2 H2 H 0 1 N N N -13.177 -8.203 -3.303 -4.072 -1.882 -1.787 H2 9IY 41 9IY H3 H3 H 0 1 N N N -15.000 -2.700 -6.132 -9.246 1.130 1.397 H3 9IY 42 9IY H4 H4 H 0 1 N N N -16.296 -2.524 -8.226 -9.754 0.441 3.706 H4 9IY 43 9IY H5 H5 H 0 1 N N N -13.348 -4.810 -10.272 -9.321 -3.650 2.581 H5 9IY 44 9IY H6 H6 H 0 1 N N N -12.011 -4.963 -8.203 -8.812 -2.961 0.272 H6 9IY 45 9IY H7 H7 H 0 1 N N N -16.118 -5.195 -2.552 -4.522 2.216 -0.652 H7 9IY 46 9IY H8 H8 H 0 1 N N N -16.430 -11.153 0.456 -0.443 3.214 0.281 H8 9IY 47 9IY H9 H9 H 0 1 N N N -14.899 -11.286 -0.474 -0.316 1.893 1.467 H9 9IY 48 9IY H10 H10 H 0 1 N N N -14.997 -14.785 10.073 10.368 -3.078 -0.140 H10 9IY 49 9IY H11 H11 H 0 1 N N N -11.782 -13.228 10.709 8.346 -5.018 -1.595 H11 9IY 50 9IY H12 H12 H 0 1 N N N -14.478 -11.760 8.402 6.898 -1.186 1.323 H12 9IY 51 9IY H13 H13 H 0 1 N N N -14.546 -12.377 6.717 8.634 -0.805 1.226 H13 9IY 52 9IY H14 H14 H 0 1 N N N -12.051 -11.099 7.871 8.104 0.854 -0.613 H14 9IY 53 9IY H15 H15 H 0 1 N N N -14.427 -9.701 6.591 6.825 1.125 2.164 H15 9IY 54 9IY H16 H16 H 0 1 N N N -13.959 -9.384 8.855 8.561 2.759 2.298 H16 9IY 55 9IY H17 H17 H 0 1 N N N -12.915 -8.250 5.449 5.651 3.022 1.425 H17 9IY 56 9IY H18 H18 H 0 1 N N N -11.378 -7.970 7.188 7.664 4.195 0.811 H18 9IY 57 9IY H19 H19 H 0 1 N N N -11.176 -10.209 4.665 5.852 2.386 -1.421 H19 9IY 58 9IY H20 H20 H 0 1 N N N -12.089 -8.766 2.782 3.816 3.586 -1.625 H20 9IY 59 9IY H21 H21 H 0 1 N N N -13.451 -8.921 0.756 1.387 3.699 -1.239 H21 9IY 60 9IY H22 H22 H 0 1 N N N -14.381 -11.883 4.564 4.119 0.414 1.209 H22 9IY 61 9IY H23 H23 H 0 1 N N N -15.751 -12.030 2.541 1.690 0.527 1.596 H23 9IY 62 9IY H24 H24 H 0 1 N N N -16.199 -7.268 -1.456 -2.249 -0.111 -1.997 H24 9IY 63 9IY H25 H25 H 0 1 N N N -14.921 -3.651 -4.054 -6.959 1.904 -0.512 H25 9IY 64 9IY H26 H26 H 0 1 N N N -12.018 -6.686 -4.855 -6.510 -2.186 -1.633 H26 9IY 65 9IY H27 H27 H 0 1 N N N -15.481 -3.595 -10.279 -9.788 -1.949 4.299 H27 9IY 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9IY C8 C9 DOUB Y N 1 9IY C8 C7 SING Y N 2 9IY C9 C10 SING Y N 3 9IY C7 C6 DOUB Y N 4 9IY C10 C5 DOUB Y N 5 9IY C5 C6 SING Y N 6 9IY C5 S SING N N 7 9IY O2 S DOUB N N 8 9IY S O1 DOUB N N 9 9IY S C4 SING N N 10 9IY C4 C3 DOUB Y N 11 9IY C4 C11 SING Y N 12 9IY C3 C2 SING Y N 13 9IY C11 C12 DOUB Y N 14 9IY C2 C1 DOUB Y N 15 9IY C12 C1 SING Y N 16 9IY C1 N SING N N 17 9IY N C SING N N 18 9IY O C DOUB N N 19 9IY C N1 SING N N 20 9IY N1 C13 SING N N 21 9IY C13 C14 SING N N 22 9IY C14 C15 DOUB Y N 23 9IY C14 C24 SING Y N 24 9IY C15 C16 SING Y N 25 9IY C24 C23 DOUB Y N 26 9IY C16 C17 DOUB Y N 27 9IY C23 C17 SING Y N 28 9IY C17 C18 SING N N 29 9IY C18 O3 SING N N 30 9IY C18 C22 SING N N 31 9IY O3 C19 SING N N 32 9IY C22 O9 SING N N 33 9IY C22 C21 SING N N 34 9IY C21 C19 SING N N 35 9IY C21 O8 SING N N 36 9IY C19 C20 SING N N 37 9IY C20 O4 SING N N 38 9IY O4 P SING N N 39 9IY P O6 DOUB N N 40 9IY P O7 SING N N 41 9IY P O5 SING N N 42 9IY N1 H1 SING N N 43 9IY C2 H2 SING N N 44 9IY C6 H3 SING N N 45 9IY C7 H4 SING N N 46 9IY C9 H5 SING N N 47 9IY C10 H6 SING N N 48 9IY C12 H7 SING N N 49 9IY C13 H8 SING N N 50 9IY C13 H9 SING N N 51 9IY O7 H10 SING N N 52 9IY O5 H11 SING N N 53 9IY C20 H12 SING N N 54 9IY C20 H13 SING N N 55 9IY C19 H14 SING N N 56 9IY C21 H15 SING N N 57 9IY O8 H16 SING N N 58 9IY C22 H17 SING N N 59 9IY O9 H18 SING N N 60 9IY C18 H19 SING N N 61 9IY C16 H20 SING N N 62 9IY C15 H21 SING N N 63 9IY C23 H22 SING N N 64 9IY C24 H23 SING N N 65 9IY N H24 SING N N 66 9IY C11 H25 SING N N 67 9IY C3 H26 SING N N 68 9IY C8 H27 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9IY InChI InChI 1.06 "InChI=1S/C25H27N2O10PS/c28-22-21(15-36-38(31,32)33)37-24(23(22)29)17-8-6-16(7-9-17)14-26-25(30)27-18-10-12-20(13-11-18)39(34,35)19-4-2-1-3-5-19/h1-13,21-24,28-29H,14-15H2,(H2,26,27,30)(H2,31,32,33)/t21-,22-,23-,24+/m1/s1" 9IY InChIKey InChI 1.06 KYXDHJBRPDKXBZ-YCAMKHIRSA-N 9IY SMILES_CANONICAL CACTVS 3.385 "O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)c2ccc(CNC(=O)Nc3ccc(cc3)[S](=O)(=O)c4ccccc4)cc2" 9IY SMILES CACTVS 3.385 "O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)c2ccc(CNC(=O)Nc3ccc(cc3)[S](=O)(=O)c4ccccc4)cc2" 9IY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)S(=O)(=O)c2ccc(cc2)NC(=O)NCc3ccc(cc3)[C@H]4[C@@H]([C@@H]([C@H](O4)COP(=O)(O)O)O)O" 9IY SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)S(=O)(=O)c2ccc(cc2)NC(=O)NCc3ccc(cc3)C4C(C(C(O4)COP(=O)(O)O)O)O" # _pdbx_chem_comp_identifier.comp_id 9IY _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{S},4~{R},5~{S})-3,4-bis(oxidanyl)-5-[4-[[[4-(phenylsulfonyl)phenyl]carbamoylamino]methyl]phenyl]oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9IY "Create component" 2021-11-15 PDBE 9IY "Initial release" 2021-11-24 RCSB 9IY "Modify descriptor" 2022-08-22 RCSB #