data_9LO # _chem_comp.id 9LO _chem_comp.name "4-[[2,4-bis(azanyl)-6-oxidanylidene-1H-pyrimidin-5-yl]carbamoylamino]benzoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H12 N6 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-08-13 _chem_comp.pdbx_modified_date 2014-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 304.261 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9LO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4B4W _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9LO N2A N2A N 0 1 N N N 7.282 8.658 60.361 6.150 -1.726 -0.399 N2A 9LO 1 9LO N1 N1 N 0 1 N N N 5.225 9.701 60.723 4.790 0.053 -1.000 N1 9LO 2 9LO C2 C2 C 0 1 N N N 5.983 8.583 60.664 5.024 -0.968 -0.204 C2 9LO 3 9LO N3 N3 N 0 1 N N N 5.437 7.373 60.910 4.174 -1.289 0.809 N3 9LO 4 9LO C4 C4 C 0 1 N N N 4.131 7.265 61.217 3.060 -0.556 1.018 C4 9LO 5 9LO O4A O4A O 0 1 N N N 3.607 6.030 61.470 2.291 -0.837 1.924 O4A 9LO 6 9LO N5A N5A N 0 1 N N N 2.037 8.253 61.597 1.649 1.328 0.357 N5A 9LO 7 9LO C5 C5 C 0 1 N N N 3.331 8.412 61.303 2.801 0.535 0.175 C5 9LO 8 9LO C6 C6 C 0 1 N N N 3.912 9.650 61.030 3.703 0.819 -0.844 C6 9LO 9 9LO N7 N7 N 0 1 N N N 3.182 10.765 61.089 3.478 1.887 -1.694 N7 9LO 10 9LO O8A O8A O 0 1 N N N 2.310 7.956 63.840 0.318 -0.442 0.180 O8A 9LO 11 9LO N9 N9 N 0 1 N N N 0.247 7.839 62.898 -0.676 1.535 0.376 N9 9LO 12 9LO C1B C1B C 0 1 Y N N -0.484 7.433 63.945 -1.938 0.966 0.209 C1B 9LO 13 9LO C2B C2B C 0 1 Y N N -1.852 7.718 63.966 -3.027 1.474 0.910 C2B 9LO 14 9LO C3B C3B C 0 1 Y N N -2.652 7.243 65.004 -4.274 0.915 0.748 C3B 9LO 15 9LO C4B C4B C 0 1 Y N N -2.109 6.463 66.020 -4.445 -0.166 -0.123 C4B 9LO 16 9LO C5B C5B C 0 1 Y N N -0.754 6.137 65.978 -3.349 -0.674 -0.826 C5B 9LO 17 9LO C6B C6B C 0 1 Y N N 0.050 6.610 64.943 -2.106 -0.106 -0.663 C6B 9LO 18 9LO C7B C7B C 0 1 N N N -2.984 5.900 67.157 -5.780 -0.768 -0.299 C7B 9LO 19 9LO O7B O7B O 0 1 N N N -2.575 4.951 67.832 -6.732 -0.325 0.313 O7B 9LO 20 9LO CAW CAW C 0 1 N N N 1.581 7.993 62.840 0.426 0.763 0.300 CAW 9LO 21 9LO H2A1 H2A1 H 0 0 N N N 7.702 9.547 60.175 6.764 -1.507 -1.118 H2A1 9LO 22 9LO H2A2 H2A2 H 0 0 N N N 7.835 7.826 60.320 6.336 -2.478 0.184 H2A2 9LO 23 9LO H71N H71N H 0 0 N N N 3.760 11.554 60.879 4.109 2.082 -2.404 H71N 9LO 24 9LO H72N H72N H 0 0 N N N 2.437 10.711 60.424 2.690 2.440 -1.579 H72N 9LO 25 9LO H9 H9 H 0 1 N N N -0.259 8.052 62.062 -0.592 2.486 0.547 H9 9LO 26 9LO H2B H2B H 0 1 N N N -2.291 8.308 63.175 -2.894 2.309 1.582 H2B 9LO 27 9LO H6B H6B H 0 1 N N N 1.095 6.339 64.911 -1.259 -0.495 -1.209 H6B 9LO 28 9LO H3B H3B H 0 1 N N N -3.705 7.483 65.020 -5.119 1.310 1.292 H3B 9LO 29 9LO H5B H5B H 0 1 N N N -0.326 5.516 66.751 -3.478 -1.508 -1.499 H5B 9LO 30 9LO H5A H5A H 0 1 N N N 1.371 8.331 60.856 1.737 2.279 0.524 H5A 9LO 31 9LO HN3 HN3 H 0 1 N N N 6.006 6.552 60.864 4.368 -2.046 1.383 HN3 9LO 32 9LO OXT OXT O 0 1 N Y N ? ? ? -5.943 -1.809 -1.139 OXT 9LO 33 9LO HXT HXT H 0 1 N Y N ? ? ? -6.836 -2.171 -1.221 HXT 9LO 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9LO N2A C2 SING N N 1 9LO N1 C2 DOUB N N 2 9LO N1 C6 SING N N 3 9LO C2 N3 SING N N 4 9LO N3 C4 SING N N 5 9LO C4 O4A DOUB N N 6 9LO C4 C5 SING N N 7 9LO N5A C5 SING N N 8 9LO N5A CAW SING N N 9 9LO C5 C6 DOUB N N 10 9LO C6 N7 SING N N 11 9LO O8A CAW DOUB N N 12 9LO N9 C1B SING N N 13 9LO N9 CAW SING N N 14 9LO C1B C2B SING Y N 15 9LO C1B C6B DOUB Y N 16 9LO C2B C3B DOUB Y N 17 9LO C3B C4B SING Y N 18 9LO C4B C5B DOUB Y N 19 9LO C4B C7B SING N N 20 9LO C5B C6B SING Y N 21 9LO C7B O7B DOUB N N 22 9LO N2A H2A1 SING N N 23 9LO N2A H2A2 SING N N 24 9LO N7 H71N SING N N 25 9LO N7 H72N SING N N 26 9LO N9 H9 SING N N 27 9LO C2B H2B SING N N 28 9LO C6B H6B SING N N 29 9LO C3B H3B SING N N 30 9LO C5B H5B SING N N 31 9LO N5A H5A SING N N 32 9LO N3 HN3 SING N N 33 9LO C7B OXT SING N N 34 9LO OXT HXT SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9LO SMILES ACDLabs 12.01 "O=C2C(NC(=O)Nc1ccc(C(=O)O)cc1)=C(N=C(N)N2)N" 9LO InChI InChI 1.03 "InChI=1S/C12H12N6O4/c13-8-7(9(19)18-11(14)17-8)16-12(22)15-6-3-1-5(2-4-6)10(20)21/h1-4H,(H,20,21)(H2,15,16,22)(H5,13,14,17,18,19)" 9LO InChIKey InChI 1.03 PYZLZAMQAFSOFT-UHFFFAOYSA-N 9LO SMILES_CANONICAL CACTVS 3.385 "NC1=NC(=C(NC(=O)Nc2ccc(cc2)C(O)=O)C(=O)N1)N" 9LO SMILES CACTVS 3.385 "NC1=NC(=C(NC(=O)Nc2ccc(cc2)C(O)=O)C(=O)N1)N" 9LO SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1cc(ccc1C(=O)O)NC(=O)NC2=C(N=C(NC2=O)N)N" 9LO SMILES "OpenEye OEToolkits" 1.9.2 "c1cc(ccc1C(=O)O)NC(=O)NC2=C(N=C(NC2=O)N)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9LO "SYSTEMATIC NAME" ACDLabs 12.01 "4-{[(2,4-diamino-6-oxo-1,6-dihydropyrimidin-5-yl)carbamoyl]amino}benzoic acid" 9LO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "4-[[2,4-bis(azanyl)-6-oxidanylidene-1H-pyrimidin-5-yl]carbamoylamino]benzoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9LO "Create component" 2012-08-13 EBI 9LO "Modify descriptor" 2014-09-05 RCSB #