data_9N7 # _chem_comp.id 9N7 _chem_comp.name "4-{[(2S)-2-cyclohexyl-2-{5,6-difluoro-2-[4-(1,3-thiazol-2-yl)phenyl]-1H-benzimidazol-1-yl}acetyl]amino}benzoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H26 F2 N4 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-05-19 _chem_comp.pdbx_modified_date 2017-06-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 572.625 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9N7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5Q1B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9N7 N1 N1 N 0 1 Y N N 12.949 24.154 3.835 -1.990 -0.810 -0.034 N1 9N7 1 9N7 N3 N2 N 0 1 Y N N 13.227 25.823 2.366 -2.074 -2.614 1.211 N3 9N7 2 9N7 C4 C1 C 0 1 Y N N 11.758 24.874 3.850 -3.267 -0.882 0.490 C4 9N7 3 9N7 C5 C2 C 0 1 Y N N 11.936 25.898 2.938 -3.301 -2.042 1.284 C5 9N7 4 9N7 C6 C3 C 0 1 N N N 12.354 21.796 4.416 -0.403 1.017 -0.213 C6 9N7 5 9N7 C7 C4 C 0 1 N N S 13.306 22.973 4.662 -1.473 0.231 -0.926 C7 9N7 6 9N7 C8 C5 C 0 1 Y N N 10.589 24.699 4.574 -4.398 -0.086 0.376 C8 9N7 7 9N7 C10 C6 C 0 1 Y N N 10.898 26.803 2.713 -4.482 -2.387 1.950 C10 9N7 8 9N7 N12 N3 N 0 1 N N N 11.989 21.618 3.125 0.349 1.903 -0.895 N12 9N7 9 9N7 C13 C7 C 0 1 Y N N 9.586 25.596 4.342 -5.555 -0.437 1.043 C13 9N7 10 9N7 C15 C8 C 0 1 Y N N 9.734 26.626 3.430 -5.595 -1.586 1.827 C15 9N7 11 9N7 C20 C9 C 0 1 Y N N 9.472 18.550 1.659 3.421 3.950 1.035 C20 9N7 12 9N7 C21 C10 C 0 1 Y N N 21.139 22.434 1.193 6.048 -3.125 -1.980 C21 9N7 13 9N7 C22 C11 C 0 1 Y N N 20.768 21.285 0.608 6.542 -3.827 -0.953 C22 9N7 14 9N7 C24 C12 C 0 1 Y N N 15.234 23.143 1.858 0.885 -2.938 1.030 C24 9N7 15 9N7 C26 C13 C 0 1 Y N N 16.460 22.619 1.494 2.197 -3.232 0.735 C26 9N7 16 9N7 C28 C14 C 0 1 N N N 13.418 23.338 6.154 -2.612 1.169 -1.329 C28 9N7 17 9N7 C2 C15 C 0 1 Y N N 13.790 24.786 2.938 -1.296 -1.891 0.442 C2 9N7 18 9N7 F33 F1 F 0 1 N N N 8.709 27.482 3.245 -6.736 -1.919 2.470 F33 9N7 19 9N7 F32 F2 F 0 1 N N N 8.422 25.471 5.017 -6.655 0.339 0.931 F32 9N7 20 9N7 C14 C16 C 0 1 Y N N 15.150 24.323 2.609 0.114 -2.202 0.127 C14 9N7 21 9N7 C18 C17 C 0 1 Y N N 17.646 23.257 1.855 2.757 -2.793 -0.467 C18 9N7 22 9N7 C9 C18 C 0 1 Y N N 18.964 22.663 1.451 4.165 -3.109 -0.784 C9 9N7 23 9N7 N11 N4 N 0 1 Y N N 20.120 23.227 1.678 4.794 -2.755 -1.869 N11 9N7 24 9N7 S17 S1 S 0 1 Y N N 19.062 21.136 0.640 5.267 -4.015 0.249 S17 9N7 25 9N7 C27 C19 C 0 1 Y N N 17.572 24.439 2.603 1.986 -2.057 -1.370 C27 9N7 26 9N7 C25 C20 C 0 1 Y N N 16.337 24.968 2.977 0.676 -1.758 -1.072 C25 9N7 27 9N7 O19 O1 O 0 1 N N N 11.973 21.085 5.345 -0.219 0.853 0.975 O19 9N7 28 9N7 C29 C21 C 0 1 Y N N 11.129 20.590 2.630 1.377 2.588 -0.249 C29 9N7 29 9N7 C35 C22 C 0 1 Y N N 10.955 20.417 1.256 2.095 1.965 0.768 C35 9N7 30 9N7 C30 C23 C 0 1 Y N N 10.133 19.411 0.781 3.111 2.638 1.408 C30 9N7 31 9N7 C16 C24 C 0 1 N N N 8.576 17.448 1.142 4.512 4.672 1.715 C16 9N7 32 9N7 O23 O2 O 0 1 N N N 8.293 16.477 1.829 5.209 4.070 2.699 O23 9N7 33 9N7 O34 O3 O 0 1 N N N 8.137 17.607 -0.076 4.784 5.810 1.387 O34 9N7 34 9N7 C31 C25 C 0 1 Y N N 9.656 18.724 3.032 2.698 4.573 0.014 C31 9N7 35 9N7 C36 C26 C 0 1 Y N N 10.476 19.729 3.511 1.684 3.893 -0.622 C36 9N7 36 9N7 C37 C27 C 0 1 N N N 13.934 24.795 6.353 -3.646 0.393 -2.147 C37 9N7 37 9N7 C40 C28 C 0 1 N N N 14.040 25.166 7.843 -4.786 1.331 -2.551 C40 9N7 38 9N7 C41 C29 C 0 1 N N N 14.930 24.185 8.597 -4.227 2.479 -3.393 C41 9N7 39 9N7 C39 C30 C 0 1 N N N 14.440 22.739 8.405 -3.193 3.255 -2.575 C39 9N7 40 9N7 C38 C31 C 0 1 N N N 14.338 22.377 6.905 -2.053 2.317 -2.171 C38 9N7 41 9N7 H1 H1 H 0 1 N N N 14.306 22.642 4.343 -1.050 -0.232 -1.818 H1 9N7 42 9N7 H2 H2 H 0 1 N N N 10.477 23.894 5.285 -4.373 0.805 -0.233 H2 9N7 43 9N7 H3 H3 H 0 1 N N N 11.003 27.611 2.004 -4.520 -3.278 2.558 H3 9N7 44 9N7 H4 H4 H 0 1 N N N 12.355 22.265 2.456 0.176 2.064 -1.836 H4 9N7 45 9N7 H5 H5 H 0 1 N N N 22.176 22.722 1.279 6.645 -2.876 -2.845 H5 9N7 46 9N7 H6 H6 H 0 1 N N N 21.445 20.561 0.180 7.548 -4.212 -0.875 H6 9N7 47 9N7 H7 H7 H 0 1 N N N 14.328 22.636 1.560 0.450 -3.281 1.957 H7 9N7 48 9N7 H8 H8 H 0 1 N N N 16.500 21.703 0.923 2.793 -3.801 1.433 H8 9N7 49 9N7 H9 H9 H 0 1 N N N 12.414 23.272 6.598 -3.086 1.571 -0.434 H9 9N7 50 9N7 H10 H10 H 0 1 N N N 18.481 24.946 2.893 2.420 -1.717 -2.299 H10 9N7 51 9N7 H11 H11 H 0 1 N N N 16.296 25.880 3.554 0.080 -1.189 -1.770 H11 9N7 52 9N7 H12 H12 H 0 1 N N N 11.463 21.070 0.562 1.854 0.952 1.055 H12 9N7 53 9N7 H13 H13 H 0 1 N N N 10.001 19.290 -0.284 3.667 2.154 2.196 H13 9N7 54 9N7 H14 H14 H 0 1 N N N 7.726 15.895 1.337 5.915 4.584 3.115 H14 9N7 55 9N7 H15 H15 H 0 1 N N N 9.153 18.067 3.727 2.935 5.586 -0.276 H15 9N7 56 9N7 H16 H16 H 0 1 N N N 10.612 19.848 4.576 1.125 4.374 -1.411 H16 9N7 57 9N7 H17 H17 H 0 1 N N N 14.928 24.887 5.892 -3.173 -0.010 -3.043 H17 9N7 58 9N7 H18 H18 H 0 1 N N N 13.237 25.490 5.862 -4.044 -0.426 -1.548 H18 9N7 59 9N7 H19 H19 H 0 1 N N N 14.466 26.176 7.931 -5.522 0.778 -3.134 H19 9N7 60 9N7 H20 H20 H 0 1 N N N 13.034 25.152 8.288 -5.259 1.733 -1.655 H20 9N7 61 9N7 H21 H21 H 0 1 N N N 15.960 24.269 8.219 -3.753 2.076 -4.288 H21 9N7 62 9N7 H22 H22 H 0 1 N N N 14.911 24.432 9.669 -5.038 3.147 -3.680 H22 9N7 63 9N7 H23 H23 H 0 1 N N N 13.448 22.632 8.868 -2.795 4.074 -3.175 H23 9N7 64 9N7 H24 H24 H 0 1 N N N 15.148 22.053 8.892 -3.666 3.658 -1.679 H24 9N7 65 9N7 H25 H25 H 0 1 N N N 13.940 21.356 6.811 -1.317 2.870 -1.588 H25 9N7 66 9N7 H26 H26 H 0 1 N N N 15.342 22.422 6.458 -1.580 1.914 -3.067 H26 9N7 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9N7 O34 C16 DOUB N N 1 9N7 C22 S17 SING Y N 2 9N7 C22 C21 DOUB Y N 3 9N7 S17 C9 SING Y N 4 9N7 C30 C35 DOUB Y N 5 9N7 C30 C20 SING Y N 6 9N7 C16 C20 SING N N 7 9N7 C16 O23 SING N N 8 9N7 C21 N11 SING Y N 9 9N7 C35 C29 SING Y N 10 9N7 C9 N11 DOUB Y N 11 9N7 C9 C18 SING N N 12 9N7 C26 C18 DOUB Y N 13 9N7 C26 C24 SING Y N 14 9N7 C20 C31 DOUB Y N 15 9N7 C18 C27 SING Y N 16 9N7 C24 C14 DOUB Y N 17 9N7 N3 C5 SING Y N 18 9N7 N3 C2 DOUB Y N 19 9N7 C27 C25 DOUB Y N 20 9N7 C14 C2 SING N N 21 9N7 C14 C25 SING Y N 22 9N7 C29 N12 SING N N 23 9N7 C29 C36 DOUB Y N 24 9N7 C10 C5 DOUB Y N 25 9N7 C10 C15 SING Y N 26 9N7 C5 C4 SING Y N 27 9N7 C2 N1 SING Y N 28 9N7 C31 C36 SING Y N 29 9N7 N12 C6 SING N N 30 9N7 F33 C15 SING N N 31 9N7 C15 C13 DOUB Y N 32 9N7 N1 C4 SING Y N 33 9N7 N1 C7 SING N N 34 9N7 C4 C8 DOUB Y N 35 9N7 C13 C8 SING Y N 36 9N7 C13 F32 SING N N 37 9N7 C6 C7 SING N N 38 9N7 C6 O19 DOUB N N 39 9N7 C7 C28 SING N N 40 9N7 C28 C37 SING N N 41 9N7 C28 C38 SING N N 42 9N7 C37 C40 SING N N 43 9N7 C38 C39 SING N N 44 9N7 C40 C41 SING N N 45 9N7 C39 C41 SING N N 46 9N7 C7 H1 SING N N 47 9N7 C8 H2 SING N N 48 9N7 C10 H3 SING N N 49 9N7 N12 H4 SING N N 50 9N7 C21 H5 SING N N 51 9N7 C22 H6 SING N N 52 9N7 C24 H7 SING N N 53 9N7 C26 H8 SING N N 54 9N7 C28 H9 SING N N 55 9N7 C27 H10 SING N N 56 9N7 C25 H11 SING N N 57 9N7 C35 H12 SING N N 58 9N7 C30 H13 SING N N 59 9N7 O23 H14 SING N N 60 9N7 C31 H15 SING N N 61 9N7 C36 H16 SING N N 62 9N7 C37 H17 SING N N 63 9N7 C37 H18 SING N N 64 9N7 C40 H19 SING N N 65 9N7 C40 H20 SING N N 66 9N7 C41 H21 SING N N 67 9N7 C41 H22 SING N N 68 9N7 C39 H23 SING N N 69 9N7 C39 H24 SING N N 70 9N7 C38 H25 SING N N 71 9N7 C38 H26 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9N7 SMILES ACDLabs 12.01 "n1(c4cc(F)c(cc4nc1c2ccc(cc2)c3nccs3)F)C(C(=O)Nc5ccc(cc5)C(O)=O)C6CCCCC6" 9N7 InChI InChI 1.03 "InChI=1S/C31H26F2N4O3S/c32-23-16-25-26(17-24(23)33)37(28(36-25)19-6-8-20(9-7-19)30-34-14-15-41-30)27(18-4-2-1-3-5-18)29(38)35-22-12-10-21(11-13-22)31(39)40/h6-18,27H,1-5H2,(H,35,38)(H,39,40)/t27-/m0/s1" 9N7 InChIKey InChI 1.03 DUGIQUVAQZHWSE-MHZLTWQESA-N 9N7 SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1ccc(NC(=O)[C@H](C2CCCCC2)n3c4cc(F)c(F)cc4nc3c5ccc(cc5)c6sccn6)cc1" 9N7 SMILES CACTVS 3.385 "OC(=O)c1ccc(NC(=O)[CH](C2CCCCC2)n3c4cc(F)c(F)cc4nc3c5ccc(cc5)c6sccn6)cc1" 9N7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1c2nc3cc(c(cc3n2[C@@H](C4CCCCC4)C(=O)Nc5ccc(cc5)C(=O)O)F)F)c6nccs6" 9N7 SMILES "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1c2nc3cc(c(cc3n2C(C4CCCCC4)C(=O)Nc5ccc(cc5)C(=O)O)F)F)c6nccs6" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9N7 "SYSTEMATIC NAME" ACDLabs 12.01 "4-{[(2S)-2-cyclohexyl-2-{5,6-difluoro-2-[4-(1,3-thiazol-2-yl)phenyl]-1H-benzimidazol-1-yl}acetyl]amino}benzoic acid" 9N7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "4-[[(2~{S})-2-[5,6-bis(fluoranyl)-2-[4-(1,3-thiazol-2-yl)phenyl]benzimidazol-1-yl]-2-cyclohexyl-ethanoyl]amino]benzoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9N7 "Create component" 2017-05-19 RCSB 9N7 "Initial release" 2017-07-05 RCSB #