data_9SS # _chem_comp.id 9SS _chem_comp.name "(3R)-1-(2-{[1-(pyrimidin-5-yl)cyclopropyl]amino}pyrimidine-5-carbonyl)piperidine-3-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 N7 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-26 _chem_comp.pdbx_modified_date 2022-01-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 349.390 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9SS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7SLX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9SS N3 N1 N 0 1 N N N 17.082 -30.546 -29.464 2.932 -1.542 0.811 N3 9SS 1 9SS C4 C1 C 0 1 Y N N 17.679 -30.280 -28.255 1.574 -1.521 0.574 C4 9SS 2 9SS N2 N2 N 0 1 Y N N 16.808 -30.221 -27.164 1.113 -0.855 -0.477 N2 9SS 3 9SS C7 C2 C 0 1 N N N 17.382 -31.512 -31.772 3.846 -1.484 -1.581 C7 9SS 4 9SS C6 C3 C 0 1 N N N 18.698 -31.713 -31.061 5.021 -1.789 -0.650 C6 9SS 5 9SS C9 C4 C 0 1 Y N N 17.293 -28.126 -31.182 3.396 1.269 0.972 C9 9SS 6 9SS C13 C5 C 0 1 N N N 19.086 -28.231 -22.308 -2.354 0.935 -0.632 C13 9SS 7 9SS C8 C6 C 0 1 Y N N 18.238 -29.156 -31.081 4.097 0.542 0.023 C8 9SS 8 9SS N5 N3 N 0 1 Y N N 19.961 -27.563 -31.633 5.208 2.505 -0.585 N5 9SS 9 9SS C18 C7 C 0 1 N N N 15.602 -26.387 -23.799 -6.591 1.020 0.046 C18 9SS 10 9SS C16 C8 C 0 1 N N R 16.490 -27.459 -23.386 -5.148 0.861 0.293 C16 9SS 11 9SS C1 C9 C 0 1 Y N N 17.375 -29.888 -25.995 -0.179 -0.810 -0.738 C1 9SS 12 9SS C2 C10 C 0 1 Y N N 18.740 -29.612 -25.855 -1.068 -1.480 0.113 C2 9SS 13 9SS C3 C11 C 0 1 Y N N 19.545 -29.783 -26.991 -0.541 -2.172 1.211 C3 9SS 14 9SS N1 N4 N 0 1 Y N N 19.057 -30.102 -28.206 0.765 -2.172 1.401 N1 9SS 15 9SS C5 C12 C 0 1 N N N 17.824 -30.520 -30.702 3.853 -0.934 -0.153 C5 9SS 16 9SS N4 N5 N 0 1 Y N N 17.634 -26.854 -31.499 3.633 2.566 1.094 N4 9SS 17 9SS C10 C13 C 0 1 Y N N 18.963 -26.638 -31.718 4.522 3.164 0.328 C10 9SS 18 9SS C11 C14 C 0 1 Y N N 19.579 -28.818 -31.304 5.029 1.206 -0.760 C11 9SS 19 9SS C12 C15 C 0 1 N N N 19.351 -29.317 -24.552 -2.522 -1.457 -0.140 C12 9SS 20 9SS O1 O1 O 0 1 N N N 20.348 -29.922 -24.168 -3.167 -2.485 -0.069 O1 9SS 21 9SS N6 N6 N 0 1 N N N 18.756 -28.351 -23.738 -3.133 -0.297 -0.451 N6 9SS 22 9SS C14 C16 C 0 1 N N N 17.801 -28.398 -21.482 -2.935 2.024 0.276 C14 9SS 23 9SS C15 C17 C 0 1 N N N 16.779 -27.344 -21.886 -4.430 2.178 -0.012 C15 9SS 24 9SS C17 C18 C 0 1 N N N 17.798 -27.353 -24.205 -4.592 -0.241 -0.615 C17 9SS 25 9SS N7 N7 N 0 1 N N N 14.893 -25.538 -24.132 -7.704 1.142 -0.144 N7 9SS 26 9SS H3 H1 H 0 1 N N N 16.344 -29.879 -29.565 3.277 -1.956 1.617 H3 9SS 27 9SS H7 H2 H 0 1 N N N 17.369 -31.210 -32.830 4.017 -0.777 -2.393 H7 9SS 28 9SS H6 H3 H 0 1 N N N 16.542 -32.194 -31.575 3.155 -2.297 -1.804 H6 9SS 29 9SS H5 H4 H 0 1 N N N 18.815 -32.542 -30.347 5.104 -2.804 -0.260 H5 9SS 30 9SS H4 H5 H 0 1 N N N 19.643 -31.558 -31.602 5.966 -1.283 -0.850 H4 9SS 31 9SS H8 H6 H 0 1 N N N 16.253 -28.355 -31.000 2.662 0.785 1.600 H8 9SS 32 9SS H12 H7 H 0 1 N N N 19.808 -29.013 -22.029 -1.314 0.752 -0.363 H12 9SS 33 9SS H11 H8 H 0 1 N N N 19.524 -27.241 -22.112 -2.412 1.257 -1.672 H11 9SS 34 9SS H17 H9 H 0 1 N N N 16.024 -28.435 -23.587 -4.985 0.590 1.336 H17 9SS 35 9SS H1 H10 H 0 1 N N N 16.747 -29.830 -25.118 -0.547 -0.266 -1.596 H1 9SS 36 9SS H2 H11 H 0 1 N N N 20.612 -29.652 -26.886 -1.193 -2.700 1.891 H2 9SS 37 9SS H9 H12 H 0 1 N N N 19.254 -25.633 -31.986 4.691 4.225 0.448 H9 9SS 38 9SS H10 H13 H 0 1 N N N 20.333 -29.585 -31.210 5.594 0.672 -1.509 H10 9SS 39 9SS H14 H14 H 0 1 N N N 17.381 -29.399 -21.660 -2.792 1.742 1.319 H14 9SS 40 9SS H13 H15 H 0 1 N N N 18.038 -28.285 -20.414 -2.427 2.968 0.082 H13 9SS 41 9SS H15 H16 H 0 1 N N N 17.178 -26.343 -21.666 -4.573 2.435 -1.061 H15 9SS 42 9SS H16 H17 H 0 1 N N N 15.848 -27.500 -21.321 -4.841 2.969 0.616 H16 9SS 43 9SS H19 H18 H 0 1 N N N 18.227 -26.348 -24.079 -5.029 -1.199 -0.335 H19 9SS 44 9SS H18 H19 H 0 1 N N N 17.578 -27.527 -25.269 -4.835 -0.015 -1.653 H18 9SS 45 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9SS C7 C6 SING N N 1 9SS C7 C5 SING N N 2 9SS C10 N5 DOUB Y N 3 9SS C10 N4 SING Y N 4 9SS N5 C11 SING Y N 5 9SS N4 C9 DOUB Y N 6 9SS C11 C8 DOUB Y N 7 9SS C9 C8 SING Y N 8 9SS C8 C5 SING N N 9 9SS C6 C5 SING N N 10 9SS C5 N3 SING N N 11 9SS N3 C4 SING N N 12 9SS C4 N1 DOUB Y N 13 9SS C4 N2 SING Y N 14 9SS N1 C3 SING Y N 15 9SS N2 C1 DOUB Y N 16 9SS C3 C2 DOUB Y N 17 9SS C1 C2 SING Y N 18 9SS C2 C12 SING N N 19 9SS C12 O1 DOUB N N 20 9SS C12 N6 SING N N 21 9SS C17 N6 SING N N 22 9SS C17 C16 SING N N 23 9SS N7 C18 TRIP N N 24 9SS C18 C16 SING N N 25 9SS N6 C13 SING N N 26 9SS C16 C15 SING N N 27 9SS C13 C14 SING N N 28 9SS C15 C14 SING N N 29 9SS N3 H3 SING N N 30 9SS C7 H7 SING N N 31 9SS C7 H6 SING N N 32 9SS C6 H5 SING N N 33 9SS C6 H4 SING N N 34 9SS C9 H8 SING N N 35 9SS C13 H12 SING N N 36 9SS C13 H11 SING N N 37 9SS C16 H17 SING N N 38 9SS C1 H1 SING N N 39 9SS C3 H2 SING N N 40 9SS C10 H9 SING N N 41 9SS C11 H10 SING N N 42 9SS C14 H14 SING N N 43 9SS C14 H13 SING N N 44 9SS C15 H15 SING N N 45 9SS C15 H16 SING N N 46 9SS C17 H19 SING N N 47 9SS C17 H18 SING N N 48 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9SS SMILES ACDLabs 12.01 "O=C(c1cnc(NC2(CC2)c2cncnc2)nc1)N1CCCC(C#N)C1" 9SS InChI InChI 1.03 "InChI=1S/C18H19N7O/c19-6-13-2-1-5-25(11-13)16(26)14-7-22-17(23-8-14)24-18(3-4-18)15-9-20-12-21-10-15/h7-10,12-13H,1-5,11H2,(H,22,23,24)/t13-/m0/s1" 9SS InChIKey InChI 1.03 CDTXEVWHMGPGKZ-ZDUSSCGKSA-N 9SS SMILES_CANONICAL CACTVS 3.385 "O=C(N1CCC[C@H](C1)C#N)c2cnc(NC3(CC3)c4cncnc4)nc2" 9SS SMILES CACTVS 3.385 "O=C(N1CCC[CH](C1)C#N)c2cnc(NC3(CC3)c4cncnc4)nc2" 9SS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(cnc(n1)NC2(CC2)c3cncnc3)C(=O)N4CCC[C@H](C4)C#N" 9SS SMILES "OpenEye OEToolkits" 2.0.7 "c1c(cnc(n1)NC2(CC2)c3cncnc3)C(=O)N4CCCC(C4)C#N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9SS "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-1-(2-{[1-(pyrimidin-5-yl)cyclopropyl]amino}pyrimidine-5-carbonyl)piperidine-3-carbonitrile" 9SS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-1-[2-[(1-pyrimidin-5-ylcyclopropyl)amino]pyrimidin-5-yl]carbonylpiperidine-3-carbonitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9SS "Create component" 2021-10-26 RCSB 9SS "Initial release" 2022-01-12 RCSB ##