data_9TG # _chem_comp.id 9TG _chem_comp.name "3-[(2R)-2-borono-2-{[(thiophen-2-yl)acetyl]amino}ethyl]benzoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H16 B N O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "boronic acid transition state inhibitor EC04" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-06-07 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 333.167 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9TG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5W12 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9TG C6 C1 C 0 1 Y N N N N N 41.837 -9.548 -5.161 -3.099 -1.785 -1.350 C6 9TG 1 9TG C5 C2 C 0 1 Y N N N N N 41.040 -10.703 -5.092 -2.873 -1.553 0.008 C5 9TG 2 9TG C4 C3 C 0 1 Y N N N N N 40.904 -11.471 -6.256 -2.546 -0.268 0.446 C4 9TG 3 9TG C1 C4 C 0 1 N N N N N N 41.283 -11.954 -8.714 -2.096 2.151 0.005 C1 9TG 4 9TG C3 C5 C 0 1 Y N N N N N 41.493 -11.102 -7.469 -2.449 0.764 -0.465 C3 9TG 5 9TG C7 C6 C 0 1 Y N N N N N 42.445 -9.163 -6.377 -2.993 -0.745 -2.251 C7 9TG 6 9TG C8 C7 C 0 1 Y N N N N N 42.278 -9.945 -7.521 -2.673 0.527 -1.809 C8 9TG 7 9TG C9 C8 C 0 1 N N N N N N 40.385 -11.150 -3.789 -2.979 -2.662 0.978 C9 9TG 8 9TG O10 O1 O 0 1 N N N N N N 40.877 -10.802 -2.701 -3.295 -3.901 0.552 O10 9TG 9 9TG O11 O2 O 0 1 N N N N N N 39.384 -11.915 -3.767 -2.782 -2.458 2.159 O11 9TG 10 9TG C12 C9 C 0 1 N N R N N N 40.183 -11.417 -9.678 -0.591 2.376 -0.151 C12 9TG 11 9TG B13 B1 B 0 1 N N N N N N 38.634 -11.429 -9.089 -0.243 3.863 0.213 B13 9TG 12 9TG O14 O3 O 0 1 N N N N N N 38.394 -12.446 -7.966 -1.155 4.904 -0.106 O14 9TG 13 9TG O15 O4 O 0 1 N N N N N N 38.248 -10.072 -8.483 0.983 4.167 0.861 O15 9TG 14 9TG C17 C10 C 0 1 N N N N N N 41.410 -9.829 -11.228 1.207 0.793 0.295 C17 9TG 15 9TG O18 O5 O 0 1 N N N N N N 42.027 -10.698 -11.790 1.574 0.931 -0.853 O18 9TG 16 9TG C19 C11 C 0 1 N N N N N N 41.654 -8.400 -11.700 1.952 -0.137 1.218 C19 9TG 17 9TG C20 C12 C 0 1 Y N N N N N 42.588 -7.774 -10.690 3.102 -0.767 0.474 C20 9TG 18 9TG C21 C13 C 0 1 Y N N N N N 42.389 -7.121 -9.479 4.336 -0.267 0.401 C21 9TG 19 9TG C22 C14 C 0 1 Y N N N N N 43.596 -6.752 -8.848 5.229 -1.023 -0.340 C22 9TG 20 9TG C23 C15 C 0 1 Y N N N N N 44.725 -7.121 -9.576 4.719 -2.137 -0.868 C23 9TG 21 9TG S24 S1 S 0 1 Y N N N N N 44.276 -7.940 -11.044 3.023 -2.278 -0.422 S24 9TG 22 9TG N6 N1 N 0 1 N N N N N N 40.565 -10.076 -10.207 0.133 1.472 0.746 N6 9TG 23 9TG H1 H1 H 0 1 N N N N N N 41.986 -8.948 -4.275 -3.351 -2.776 -1.696 H1 9TG 24 9TG H2 H2 H 0 1 N N N N N N 40.323 -12.381 -6.215 -2.370 -0.082 1.495 H2 9TG 25 9TG H3 H3 H 0 1 N N N N N N 40.997 -12.967 -8.394 -2.637 2.886 -0.591 H3 9TG 26 9TG H4 H4 H 0 1 N N N N N N 42.233 -11.998 -9.266 -2.373 2.260 1.054 H4 9TG 27 9TG H5 H5 H 0 1 N N N N N N 43.040 -8.263 -6.421 -3.167 -0.923 -3.302 H5 9TG 28 9TG H6 H6 H 0 1 N N N N N N 42.755 -9.657 -8.446 -2.595 1.338 -2.518 H6 9TG 29 9TG H7 H7 H 0 1 N N N N N N 40.385 -11.196 -1.990 -3.353 -4.594 1.224 H7 9TG 30 9TG H8 H8 H 0 1 N N N N N N 40.168 -12.105 -10.536 -0.299 2.176 -1.182 H8 9TG 31 9TG H9 H9 H 0 1 N N N N N N 37.489 -12.396 -7.680 -0.854 5.785 0.157 H9 9TG 32 9TG H10 H10 H 0 1 N N N N N N 37.357 -10.113 -8.156 1.108 5.109 1.044 H10 9TG 33 9TG H11 H11 H 0 1 N N N N N N 42.118 -8.402 -12.698 2.335 0.425 2.069 H11 9TG 34 9TG H12 H12 H 0 1 N N N N N N 40.706 -7.844 -11.738 1.277 -0.917 1.571 H12 9TG 35 9TG H13 H13 H 0 1 N N N N N N 41.413 -6.917 -9.064 4.618 0.658 0.882 H13 9TG 36 9TG H14 H14 H 0 1 N N N N N N 43.640 -6.237 -7.900 6.259 -0.732 -0.480 H14 9TG 37 9TG H15 H15 H 0 1 N N N N N N 45.742 -6.925 -9.270 5.265 -2.845 -1.473 H15 9TG 38 9TG H16 H16 H 0 1 N N N N N N 40.154 -9.281 -9.760 -0.160 1.361 1.664 H16 9TG 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9TG O18 C17 DOUB N N 1 9TG C19 C17 SING N N 2 9TG C19 C20 SING N N 3 9TG C17 N6 SING N N 4 9TG S24 C20 SING Y N 5 9TG S24 C23 SING Y N 6 9TG C20 C21 DOUB Y N 7 9TG N6 C12 SING N N 8 9TG C12 B13 SING N N 9 9TG C12 C1 SING N N 10 9TG C23 C22 DOUB Y N 11 9TG C21 C22 SING Y N 12 9TG B13 O15 SING N N 13 9TG B13 O14 SING N N 14 9TG C1 C3 SING N N 15 9TG C8 C3 DOUB Y N 16 9TG C8 C7 SING Y N 17 9TG C3 C4 SING Y N 18 9TG C7 C6 DOUB Y N 19 9TG C4 C5 DOUB Y N 20 9TG C6 C5 SING Y N 21 9TG C5 C9 SING N N 22 9TG C9 O11 DOUB N N 23 9TG C9 O10 SING N N 24 9TG C6 H1 SING N N 25 9TG C4 H2 SING N N 26 9TG C1 H3 SING N N 27 9TG C1 H4 SING N N 28 9TG C7 H5 SING N N 29 9TG C8 H6 SING N N 30 9TG O10 H7 SING N N 31 9TG C12 H8 SING N N 32 9TG O14 H9 SING N N 33 9TG O15 H10 SING N N 34 9TG C19 H11 SING N N 35 9TG C19 H12 SING N N 36 9TG C21 H13 SING N N 37 9TG C22 H14 SING N N 38 9TG C23 H15 SING N N 39 9TG N6 H16 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9TG SMILES ACDLabs 12.01 "c2c(C(=O)O)cc(CC(B(O)O)NC(=O)Cc1cccs1)cc2" 9TG InChI InChI 1.03 "InChI=1S/C15H16BNO5S/c18-14(9-12-5-2-6-23-12)17-13(16(21)22)8-10-3-1-4-11(7-10)15(19)20/h1-7,13,21-22H,8-9H2,(H,17,18)(H,19,20)/t13-/m0/s1" 9TG InChIKey InChI 1.03 SHAOGLYXUUWVRD-ZDUSSCGKSA-N 9TG SMILES_CANONICAL CACTVS 3.385 "OB(O)[C@H](Cc1cccc(c1)C(O)=O)NC(=O)Cc2sccc2" 9TG SMILES CACTVS 3.385 "OB(O)[CH](Cc1cccc(c1)C(O)=O)NC(=O)Cc2sccc2" 9TG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "B([C@H](Cc1cccc(c1)C(=O)O)NC(=O)Cc2cccs2)(O)O" 9TG SMILES "OpenEye OEToolkits" 2.0.6 "B(C(Cc1cccc(c1)C(=O)O)NC(=O)Cc2cccs2)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9TG "SYSTEMATIC NAME" ACDLabs 12.01 "3-[(2R)-2-borono-2-{[(thiophen-2-yl)acetyl]amino}ethyl]benzoic acid" 9TG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "3-[(2~{R})-2-(dihydroxyboranyl)-2-(2-thiophen-2-ylethanoylamino)ethyl]benzoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9TG "Create component" 2017-06-07 RCSB 9TG "Initial release" 2017-11-29 RCSB 9TG "Modify synonyms" 2020-06-05 PDBE 9TG "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 9TG _pdbx_chem_comp_synonyms.name "boronic acid transition state inhibitor EC04" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 9TG _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom B13 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #