data_9TU # _chem_comp.id 9TU _chem_comp.name "N6-[({3-[3-(trifluoromethyl)-3H-diaziren-3-yl]phenyl}methoxy)carbonyl]-L-lysine" _chem_comp.type "peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C16 H19 F3 N4 O4" _chem_comp.mon_nstd_parent_comp_id LYS _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-07-31 _chem_comp.pdbx_modified_date 2019-04-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 388.342 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9TU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6AAD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9TU C10 C1 C 0 1 Y N N 260.572 47.791 138.599 -2.886 1.808 -0.100 C10 9TU 1 9TU C13 C2 C 0 1 N N N 258.484 46.956 140.857 0.718 1.554 0.529 C13 9TU 2 9TU CD C3 C 0 1 N N N 255.802 47.399 142.158 4.094 0.129 -0.102 CD 9TU 3 9TU CA C4 C 0 1 N N S 254.800 49.789 143.899 7.888 -0.354 0.338 CA 9TU 4 9TU C C5 C 0 1 N N N 254.264 50.710 145.003 8.843 -1.350 -0.270 C 9TU 5 9TU C26 C6 C 0 1 Y N N 261.021 47.930 136.216 -4.461 2.161 -1.869 C26 9TU 6 9TU N1 N1 N 0 1 N N N 259.289 51.832 136.199 -7.137 -0.315 0.663 N1 9TU 7 9TU N2 N2 N 0 1 N N N 260.525 51.921 135.875 -6.381 -0.420 1.640 N2 9TU 8 9TU C3 C7 C 0 1 N N N 260.276 51.402 137.212 -5.742 -0.622 0.337 C3 9TU 9 9TU C4 C8 C 0 1 N N N 260.617 52.275 138.419 -5.387 -2.047 -0.092 C4 9TU 10 9TU F5 F1 F 0 1 N N N 261.149 51.617 139.470 -6.195 -2.957 0.599 F5 9TU 11 9TU F6 F2 F 0 1 N N N 259.507 52.899 138.822 -5.599 -2.186 -1.468 F6 9TU 12 9TU F7 F3 F 0 1 N N N 261.478 53.196 137.987 -4.043 -2.301 0.201 F7 9TU 13 9TU C8 C9 C 0 1 Y N N 260.497 49.901 137.418 -4.873 0.477 -0.218 C8 9TU 14 9TU C9 C10 C 0 1 Y N N 260.362 49.169 138.628 -3.684 0.800 0.409 C9 9TU 15 9TU C11 C11 C 0 1 N N N 260.566 46.739 139.743 -1.590 2.161 0.583 C11 9TU 16 9TU O12 O1 O 0 1 N N N 259.886 47.090 140.968 -0.515 1.360 0.024 O12 9TU 17 9TU O14 O2 O 0 1 N N N 258.036 45.859 140.865 0.891 2.371 1.412 O14 9TU 18 9TU NZ N3 N 0 1 N N N 257.552 48.051 140.687 1.760 0.843 0.055 NZ 9TU 19 9TU CE C12 C 0 1 N N N 256.143 47.684 140.713 3.102 1.055 0.604 CE 9TU 20 9TU CG C13 C 0 1 N N N 254.367 47.759 142.524 5.495 0.350 0.471 CG 9TU 21 9TU CB C14 C 0 1 N N N 254.369 48.326 143.946 6.487 -0.575 -0.236 CB 9TU 22 9TU N N4 N 0 1 N N N 256.280 49.905 143.901 8.337 1.009 0.024 N 9TU 23 9TU OXT O3 O 0 1 N Y N 254.663 50.515 146.292 8.887 -2.608 0.196 OXT 9TU 24 9TU O O4 O 0 1 N N N 253.436 51.746 144.654 9.568 -1.015 -1.176 O 9TU 25 9TU C25 C15 C 0 1 Y N N 260.905 47.232 137.393 -3.274 2.489 -1.239 C25 9TU 26 9TU C27 C16 C 0 1 Y N N 260.803 49.274 136.255 -5.258 1.154 -1.360 C27 9TU 27 9TU HD2 H1 H 0 1 N N N 255.951 46.325 142.346 3.797 -0.908 0.053 HD2 9TU 28 9TU HD3 H2 H 0 1 N N N 256.481 47.981 142.798 4.099 0.350 -1.170 HD3 9TU 29 9TU HA H3 H 0 1 N N N 254.440 50.197 142.943 7.863 -0.489 1.419 HA 9TU 30 9TU H4 H4 H 0 1 N N N 261.276 47.431 135.293 -4.762 2.690 -2.761 H4 9TU 31 9TU H7 H7 H 0 1 N N N 260.103 49.669 139.550 -3.378 0.266 1.296 H7 9TU 32 9TU H8 H8 H 0 1 N N N 260.089 45.828 139.351 -1.373 3.218 0.428 H8 9TU 33 9TU H9 H9 H 0 1 N N N 261.614 46.524 139.998 -1.676 1.960 1.651 H9 9TU 34 9TU HZ H10 H 0 1 N N N 257.855 48.995 140.560 1.622 0.191 -0.650 HZ 9TU 35 9TU HE2 H11 H 0 1 N N N 255.527 48.513 140.333 3.096 0.834 1.672 HE2 9TU 36 9TU HE3 H12 H 0 1 N N N 255.972 46.788 140.098 3.398 2.092 0.449 HE3 9TU 37 9TU HG2 H13 H 0 1 N N N 253.981 48.513 141.822 5.792 1.387 0.316 HG2 9TU 38 9TU HG3 H14 H 0 1 N N N 253.734 46.860 142.481 5.489 0.130 1.539 HG3 9TU 39 9TU HB2 H15 H 0 1 N N N 253.358 48.253 144.373 6.493 -0.355 -1.303 HB2 9TU 40 9TU HB3 H16 H 0 1 N N N 255.072 47.755 144.570 6.190 -1.613 -0.081 HB3 9TU 41 9TU H H17 H 0 1 N N N 256.539 50.870 143.870 8.368 1.158 -0.974 H 9TU 42 9TU H2 H18 H 0 1 N Y N 256.646 49.488 144.733 7.750 1.695 0.474 H2 9TU 43 9TU HXT H20 H 0 1 N Y N 254.282 51.186 146.847 9.515 -3.210 -0.226 HXT 9TU 44 9TU H21 H21 H 0 1 N N N 261.089 46.168 137.366 -2.651 3.276 -1.637 H21 9TU 45 9TU H22 H22 H 0 1 N N N 260.875 49.850 135.344 -6.185 0.898 -1.852 H22 9TU 46 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9TU N2 N1 DOUB N N 1 9TU N2 C3 SING N N 2 9TU N1 C3 SING N N 3 9TU C26 C27 DOUB Y N 4 9TU C26 C25 SING Y N 5 9TU C27 C8 SING Y N 6 9TU C3 C8 SING N N 7 9TU C3 C4 SING N N 8 9TU C25 C10 DOUB Y N 9 9TU C8 C9 DOUB Y N 10 9TU F7 C4 SING N N 11 9TU C4 F6 SING N N 12 9TU C4 F5 SING N N 13 9TU C10 C9 SING Y N 14 9TU C10 C11 SING N N 15 9TU C11 O12 SING N N 16 9TU NZ CE SING N N 17 9TU NZ C13 SING N N 18 9TU CE CD SING N N 19 9TU C13 O14 DOUB N N 20 9TU C13 O12 SING N N 21 9TU CD CG SING N N 22 9TU CG CB SING N N 23 9TU CA N SING N N 24 9TU CA CB SING N N 25 9TU CA C SING N N 26 9TU O C DOUB N N 27 9TU C OXT SING N N 28 9TU CD HD2 SING N N 29 9TU CD HD3 SING N N 30 9TU CA HA SING N N 31 9TU C26 H4 SING N N 32 9TU C9 H7 SING N N 33 9TU C11 H8 SING N N 34 9TU C11 H9 SING N N 35 9TU NZ HZ SING N N 36 9TU CE HE2 SING N N 37 9TU CE HE3 SING N N 38 9TU CG HG2 SING N N 39 9TU CG HG3 SING N N 40 9TU CB HB2 SING N N 41 9TU CB HB3 SING N N 42 9TU N H SING N N 43 9TU N H2 SING N N 44 9TU OXT HXT SING N N 45 9TU C25 H21 SING N N 46 9TU C27 H22 SING N N 47 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9TU SMILES ACDLabs 12.01 "c2(cc(C1(N=N1)C(F)(F)F)ccc2)COC(=O)NCCCCC(N)C(O)=O" 9TU InChI InChI 1.03 "InChI=1S/C16H19F3N4O4/c17-16(18,19)15(22-23-15)11-5-3-4-10(8-11)9-27-14(26)21-7-2-1-6-12(20)13(24)25/h3-5,8,12H,1-2,6-7,9,20H2,(H,21,26)(H,24,25)/t12-/m0/s1" 9TU InChIKey InChI 1.03 JHAONYPOHPLZAQ-LBPRGKRZSA-N 9TU SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCCCNC(=O)OCc1cccc(c1)C2(N=N2)C(F)(F)F)C(O)=O" 9TU SMILES CACTVS 3.385 "N[CH](CCCCNC(=O)OCc1cccc(c1)C2(N=N2)C(F)(F)F)C(O)=O" 9TU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(cc(c1)C2(N=N2)C(F)(F)F)COC(=O)NCCCC[C@@H](C(=O)O)N" 9TU SMILES "OpenEye OEToolkits" 2.0.6 "c1cc(cc(c1)C2(N=N2)C(F)(F)F)COC(=O)NCCCCC(C(=O)O)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9TU "SYSTEMATIC NAME" ACDLabs 12.01 "N~6~-[({3-[3-(trifluoromethyl)-3H-diaziren-3-yl]phenyl}methoxy)carbonyl]-L-lysine" 9TU "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-2-azanyl-6-[[3-[3-(trifluoromethyl)-1,2-diazirin-3-yl]phenyl]methoxycarbonylamino]hexanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9TU "Create component" 2018-07-31 PDBJ 9TU "Initial release" 2019-04-17 RCSB ##