data_9UH # _chem_comp.id 9UH _chem_comp.name "(2R,5R,7R,8S,10R,12aR,14R,15R,15aS,16R)-7-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-14-(6-amino-9H-purin-9-yl)-2,10,15,16-tetrahydroxyoctahydro-2H,10H,12H-5,8-methano-2lambda~5~,10lambda~5~-furo[3,2-l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecine-2,10-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H24 N10 O13 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-27 _chem_comp.pdbx_modified_date 2022-10-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 674.411 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9UH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7SHO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9UH C2 C1 C 0 1 Y N N 137.107 6.825 18.431 8.212 -0.378 0.905 C2 9UH 1 9UH N01 N1 N 0 1 N N N 134.419 8.891 17.105 8.884 3.095 0.389 N01 9UH 2 9UH C6 C2 C 0 1 Y N N 135.195 7.765 17.396 8.226 1.878 0.417 C6 9UH 3 9UH N1 N2 N 0 1 Y N N 136.336 7.944 18.139 8.833 0.787 0.875 N1 9UH 4 9UH N3 N3 N 0 1 Y N N 136.887 5.542 18.073 6.974 -0.531 0.486 N3 9UH 5 9UH C4 C3 C 0 1 Y N N 135.741 5.353 17.322 6.287 0.503 0.011 C4 9UH 6 9UH C5 C4 C 0 1 Y N N 134.878 6.426 16.966 6.901 1.766 -0.038 C5 9UH 7 9UH N7 N4 N 0 1 Y N N 133.801 5.912 16.189 5.996 2.630 -0.556 N7 9UH 8 9UH C8 C5 C 0 1 Y N N 134.020 4.560 16.090 4.892 1.993 -0.822 C8 9UH 9 9UH N9 N5 N 0 1 Y N N 135.216 4.169 16.756 5.022 0.678 -0.489 N9 9UH 10 9UH "C1'" C6 C 0 1 N N R 135.702 2.751 16.831 3.999 -0.359 -0.640 "C1'" 9UH 11 9UH "C2'" C7 C 0 1 N N R 135.380 2.218 18.212 3.230 -0.526 0.680 "C2'" 9UH 12 9UH "O2'" O1 O 0 1 N N N 136.351 1.245 18.462 3.769 -1.600 1.448 "O2'" 9UH 13 9UH "C3'" C8 C 0 1 N N S 133.990 1.590 17.993 1.791 -0.856 0.229 "C3'" 9UH 14 9UH "C4'" C9 C 0 1 N N R 134.234 0.860 16.686 1.731 -0.398 -1.234 "C4'" 9UH 15 9UH C16 C10 C 0 1 N N N 132.889 0.494 15.899 0.728 0.746 -1.398 C16 9UH 16 9UH O17 O2 O 0 1 N N N 132.188 1.705 15.731 -0.441 0.280 -2.080 O17 9UH 17 9UH P18 P1 P 0 1 N N N 130.527 1.927 15.415 -1.927 0.473 -1.485 P18 9UH 18 9UH O19 O3 O 0 1 N N N 130.047 0.603 14.901 -2.985 0.553 -2.693 O19 9UH 19 9UH O20 O4 O 0 1 N N N 129.597 2.301 16.829 -2.279 -0.772 -0.536 O20 9UH 20 9UH C21 C11 C 0 1 N N S 128.911 1.413 17.607 -3.524 -1.460 -0.526 C21 9UH 21 9UH C22 C12 C 0 1 N N R 129.855 0.333 18.197 -3.284 -2.977 -0.369 C22 9UH 22 9UH O23 O5 O 0 1 N N N 129.631 -0.896 17.543 -4.349 -3.707 -0.984 O23 9UH 23 9UH C24 C13 C 0 1 N N R 129.549 0.242 19.667 -3.301 -3.194 1.152 C24 9UH 24 9UH C25 C14 C 0 1 N N N 130.897 0.038 20.437 -1.869 -3.378 1.662 C25 9UH 25 9UH O26 O6 O 0 1 N N N 131.470 1.259 20.710 -0.989 -2.490 0.964 O26 9UH 26 9UH P27 P2 P 0 1 N N N 133.176 1.390 20.498 0.186 -2.999 -0.012 P27 9UH 27 9UH O28 O7 O 0 1 N N N 133.677 0.761 18.972 1.564 -2.257 0.349 O28 9UH 28 9UH O29 O8 O 0 1 N N N 133.480 0.201 21.372 -0.207 -2.704 -1.545 O29 9UH 29 9UH O30 O9 O 0 1 N N N 133.624 2.800 20.590 0.359 -4.462 0.168 O30 9UH 30 9UH O31 O10 O 0 1 N N N 128.902 1.458 20.036 -3.897 -2.046 1.752 O31 9UH 31 9UH C32 C15 C 0 1 N N R 128.403 2.155 18.877 -4.302 -1.106 0.754 C32 9UH 32 9UH N33 N6 N 0 1 Y N N 128.684 3.639 18.896 -3.976 0.248 1.183 N33 9UH 33 9UH C34 C16 C 0 1 Y N N 129.885 4.168 19.478 -3.031 0.598 2.103 C34 9UH 34 9UH N35 N7 N 0 1 Y N N 129.913 5.528 19.378 -3.007 1.891 2.241 N35 9UH 35 9UH C36 C17 C 0 1 Y N N 127.945 4.733 18.404 -4.557 1.402 0.732 C36 9UH 36 9UH C37 C18 C 0 1 Y N N 128.705 5.872 18.710 -3.932 2.447 1.421 C37 9UH 37 9UH C38 C19 C 0 1 N N N 128.209 7.175 18.346 -4.339 3.775 1.152 C38 9UH 38 9UH N39 N8 N 0 1 N N N 126.917 7.219 17.668 -5.316 3.974 0.239 N39 9UH 39 9UH C40 C20 C 0 1 N N N 126.208 6.023 17.393 -5.887 2.915 -0.400 C40 9UH 40 9UH N41 N9 N 0 1 N N N 124.934 6.097 16.719 -6.876 3.147 -1.323 N41 9UH 41 9UH N42 N10 N 0 1 N N N 126.680 4.814 17.736 -5.523 1.676 -0.154 N42 9UH 42 9UH O43 O11 O 0 1 N N N 128.734 8.276 18.527 -3.822 4.716 1.730 O43 9UH 43 9UH O44 O12 O 0 1 N N N 130.413 3.195 14.645 -1.976 1.731 -0.698 O44 9UH 44 9UH "O4'" O13 O 0 1 N N N 134.984 1.854 15.923 3.042 0.044 -1.621 "O4'" 9UH 45 9UH H1 H1 H 0 1 N N N 137.995 7.005 19.019 8.743 -1.239 1.285 H1 9UH 46 9UH H2 H2 H 0 1 N N N 134.843 9.702 17.509 9.799 3.159 0.706 H2 9UH 47 9UH H3 H3 H 0 1 N N N 134.357 9.006 16.114 8.431 3.884 0.052 H3 9UH 48 9UH H4 H4 H 0 1 N N N 133.365 3.877 15.570 4.004 2.441 -1.243 H4 9UH 49 9UH H5 H5 H 0 1 N N N 136.786 2.707 16.650 4.468 -1.299 -0.927 H5 9UH 50 9UH H6 H6 H 0 1 N N N 135.348 3.019 18.965 3.242 0.407 1.244 H6 9UH 51 9UH H7 H7 H 0 1 N N N 136.206 0.866 19.321 4.693 -1.474 1.706 H7 9UH 52 9UH H8 H8 H 0 1 N N N 133.244 2.385 17.846 1.071 -0.300 0.835 H8 9UH 53 9UH H9 H9 H 0 1 N N N 134.825 -0.053 16.853 1.439 -1.225 -1.883 H9 9UH 54 9UH H10 H10 H 0 1 N N N 132.287 -0.217 16.484 0.454 1.141 -0.420 H10 9UH 55 9UH H11 H11 H 0 1 N N N 133.128 0.053 14.920 1.185 1.542 -1.988 H11 9UH 56 9UH H12 H12 H 0 1 N N N 129.674 0.715 14.035 -2.827 1.283 -3.307 H12 9UH 57 9UH H13 H13 H 0 1 N N N 128.069 0.938 17.082 -4.109 -1.253 -1.414 H13 9UH 58 9UH H14 H14 H 0 1 N N N 130.896 0.661 18.061 -2.333 -3.272 -0.789 H14 9UH 59 9UH H15 H15 H 0 1 N N N 130.209 -1.558 17.904 -4.256 -4.667 -0.919 H15 9UH 60 9UH H16 H16 H 0 1 N N N 128.896 -0.622 19.857 -3.886 -4.082 1.396 H16 9UH 61 9UH H17 H17 H 0 1 N N N 130.701 -0.492 21.381 -1.829 -3.158 2.726 H17 9UH 62 9UH H18 H18 H 0 1 N N N 131.584 -0.557 19.818 -1.551 -4.406 1.489 H18 9UH 63 9UH H19 H19 H 0 1 N N N 134.058 0.466 22.078 0.414 -3.073 -2.188 H19 9UH 64 9UH H20 H20 H 0 1 N N N 127.309 2.045 18.875 -5.367 -1.204 0.568 H20 9UH 65 9UH H21 H21 H 0 1 N N N 130.661 3.570 19.933 -2.398 -0.095 2.637 H21 9UH 66 9UH H22 H22 H 0 1 N N N 126.529 8.100 17.396 -5.611 4.876 0.038 H22 9UH 67 9UH H23 H23 H 0 1 N N N 124.425 5.260 16.518 -7.159 4.056 -1.511 H23 9UH 68 9UH H24 H24 H 0 1 N N N 124.560 6.985 16.453 -7.292 2.403 -1.786 H24 9UH 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9UH O44 P18 DOUB N N 1 9UH O19 P18 SING N N 2 9UH P18 O17 SING N N 3 9UH P18 O20 SING N N 4 9UH O17 C16 SING N N 5 9UH C16 "C4'" SING N N 6 9UH "O4'" "C4'" SING N N 7 9UH "O4'" "C1'" SING N N 8 9UH C8 N7 DOUB Y N 9 9UH C8 N9 SING Y N 10 9UH N7 C5 SING Y N 11 9UH "C4'" "C3'" SING N N 12 9UH N41 C40 SING N N 13 9UH N9 "C1'" SING N N 14 9UH N9 C4 SING Y N 15 9UH O20 C21 SING N N 16 9UH "C1'" "C2'" SING N N 17 9UH C5 C4 DOUB Y N 18 9UH C5 C6 SING Y N 19 9UH N01 C6 SING N N 20 9UH C4 N3 SING Y N 21 9UH C40 N39 SING N N 22 9UH C40 N42 DOUB N N 23 9UH C6 N1 DOUB Y N 24 9UH O23 C22 SING N N 25 9UH C21 C22 SING N N 26 9UH C21 C32 SING N N 27 9UH N39 C38 SING N N 28 9UH N42 C36 SING N N 29 9UH "C3'" "C2'" SING N N 30 9UH "C3'" O28 SING N N 31 9UH N3 C2 DOUB Y N 32 9UH N1 C2 SING Y N 33 9UH C22 C24 SING N N 34 9UH "C2'" "O2'" SING N N 35 9UH C38 O43 DOUB N N 36 9UH C38 C37 SING N N 37 9UH C36 C37 DOUB Y N 38 9UH C36 N33 SING Y N 39 9UH C37 N35 SING Y N 40 9UH C32 N33 SING N N 41 9UH C32 O31 SING N N 42 9UH N33 C34 SING Y N 43 9UH O28 P27 SING N N 44 9UH N35 C34 DOUB Y N 45 9UH C24 O31 SING N N 46 9UH C24 C25 SING N N 47 9UH C25 O26 SING N N 48 9UH P27 O30 DOUB N N 49 9UH P27 O26 SING N N 50 9UH P27 O29 SING N N 51 9UH C2 H1 SING N N 52 9UH N01 H2 SING N N 53 9UH N01 H3 SING N N 54 9UH C8 H4 SING N N 55 9UH "C1'" H5 SING N N 56 9UH "C2'" H6 SING N N 57 9UH "O2'" H7 SING N N 58 9UH "C3'" H8 SING N N 59 9UH "C4'" H9 SING N N 60 9UH C16 H10 SING N N 61 9UH C16 H11 SING N N 62 9UH O19 H12 SING N N 63 9UH C21 H13 SING N N 64 9UH C22 H14 SING N N 65 9UH O23 H15 SING N N 66 9UH C24 H16 SING N N 67 9UH C25 H17 SING N N 68 9UH C25 H18 SING N N 69 9UH O29 H19 SING N N 70 9UH C32 H20 SING N N 71 9UH C34 H21 SING N N 72 9UH N39 H22 SING N N 73 9UH N41 H23 SING N N 74 9UH N41 H24 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9UH SMILES ACDLabs 12.01 "Nc1ncnc2c1ncn2C1OC2COP(=O)(O)OC3C(OC(COP(=O)(O)OC2C1O)C3O)n1cnc2c1N=C(N)NC2=O" 9UH InChI InChI 1.03 "InChI=1S/C20H24N10O13P2/c21-14-8-15(24-3-23-14)29(4-25-8)18-11(32)12-7(41-18)2-39-45(36,37)43-13-10(31)6(1-38-44(34,35)42-12)40-19(13)30-5-26-9-16(30)27-20(22)28-17(9)33/h3-7,10-13,18-19,31-32H,1-2H2,(H,34,35)(H,36,37)(H2,21,23,24)(H3,22,27,28,33)/t6-,7-,10-,11-,12-,13+,18-,19-/m1/s1" 9UH InChIKey InChI 1.03 XRILCFTWUCUKJR-SOFRMEQTSA-N 9UH SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@@H]4CO[P](O)(=O)O[C@H]5[C@@H](O)[C@@H](O[C@@H]5CO[P](O)(=O)O[C@H]3[C@@H]4O)n6cnc7c(N)ncnc67" 9UH SMILES CACTVS 3.385 "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH]4CO[P](O)(=O)O[CH]5[CH](O)[CH](O[CH]5CO[P](O)(=O)O[CH]3[CH]4O)n6cnc7c(N)ncnc67" 9UH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)COP(=O)(O[C@H]5[C@@H]([C@@H](COP(=O)(O4)O)O[C@H]5n6cnc7c6N=C(NC7=O)N)O)O)O)N" 9UH SMILES "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(OC5C(C(COP(=O)(O4)O)OC5n6cnc7c6N=C(NC7=O)N)O)O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9UH "SYSTEMATIC NAME" ACDLabs 12.01 "(2R,5R,7R,8S,10R,12aR,14R,15R,15aS,16R)-7-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-14-(6-amino-9H-purin-9-yl)-2,10,15,16-tetrahydroxyoctahydro-2H,10H,12H-5,8-methano-2lambda~5~,10lambda~5~-furo[3,2-l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecine-2,10-dione" 9UH "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "9-[(1~{S},6~{R},8~{R},9~{R},10~{S},15~{R},17~{R},18~{R})-8-(6-aminopurin-9-yl)-3,9,12,18-tetrakis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-2-azanyl-1~{H}-purin-6-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9UH "Create component" 2021-10-27 RCSB 9UH "Initial release" 2022-10-12 RCSB #