data_9VO # _chem_comp.id 9VO _chem_comp.name "N-(phenylmethyl)pyridin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H12 N2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-11-22 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 184.237 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9VO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7QBX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9VO C1 C1 C 0 1 Y N N 28.246 0.188 -0.433 4.523 0.038 0.001 C1 9VO 1 9VO C2 C2 C 0 1 Y N N 27.022 0.025 0.208 3.902 -1.195 0.007 C2 9VO 2 9VO C3 C3 C 0 1 Y N N 28.519 -0.432 -1.645 3.747 1.190 -0.005 C3 9VO 3 9VO C4 C4 C 0 1 Y N N 27.534 -1.218 -2.205 2.370 1.059 -0.005 C4 9VO 4 9VO C5 C5 C 0 1 Y N N 26.319 -1.375 -1.550 1.812 -0.216 0.001 C5 9VO 5 9VO C8 C6 C 0 1 N N N 24.106 -2.469 -1.641 -0.432 0.822 -0.004 C8 9VO 6 9VO C11 C7 C 0 1 Y N N 23.134 -2.778 -5.133 -3.864 -0.206 -1.196 C11 9VO 7 9VO C12 C8 C 0 1 Y N N 21.981 -2.015 -5.216 -4.527 -0.397 0.002 C12 9VO 8 9VO C13 C9 C 0 1 Y N N 21.537 -1.397 -4.051 -3.864 -0.194 1.198 C13 9VO 9 9VO C14 C10 C 0 1 Y N N 22.199 -1.514 -2.830 -2.539 0.200 1.196 C14 9VO 10 9VO N6 N1 N 0 1 Y N N 26.045 -0.780 -0.376 2.586 -1.290 0.002 N6 9VO 11 9VO C10 C11 C 0 1 Y N N 23.803 -2.904 -3.927 -2.539 0.188 -1.198 C10 9VO 12 9VO C9 C12 C 0 1 Y N N 23.340 -2.295 -2.778 -1.877 0.391 -0.002 C9 9VO 13 9VO N7 N2 N 0 1 N N N 25.445 -2.163 -2.151 0.430 -0.363 0.002 N7 9VO 14 9VO H1 H1 H 0 1 N N N 29.001 0.811 0.023 5.601 0.106 0.006 H1 9VO 15 9VO H2 H2 H 0 1 N N N 26.830 0.518 1.150 4.502 -2.093 0.017 H2 9VO 16 9VO H3 H3 H 0 1 N N N 29.473 -0.303 -2.134 4.208 2.166 -0.010 H3 9VO 17 9VO H4 H4 H 0 1 N N N 27.707 -1.710 -3.151 1.737 1.933 -0.010 H4 9VO 18 9VO H5 H5 H 0 1 N N N 23.809 -1.771 -0.844 -0.231 1.413 -0.897 H5 9VO 19 9VO H6 H6 H 0 1 N N N 24.043 -3.501 -1.267 -0.231 1.422 0.883 H6 9VO 20 9VO H7 H7 H 0 1 N N N 23.513 -3.277 -6.013 -4.380 -0.369 -2.131 H7 9VO 21 9VO H8 H8 H 0 1 N N N 21.447 -1.904 -6.148 -5.562 -0.705 0.004 H8 9VO 22 9VO H9 H9 H 0 1 N N N 20.638 -0.799 -4.095 -4.382 -0.342 2.134 H9 9VO 23 9VO H10 H10 H 0 1 N N N 21.832 -1.009 -1.949 -2.022 0.359 2.131 H10 9VO 24 9VO H11 H11 H 0 1 N N N 24.708 -3.492 -3.884 -2.020 0.333 -2.134 H11 9VO 25 9VO H12 H12 H 0 1 N N N 25.903 -3.047 -2.247 0.036 -1.249 0.007 H12 9VO 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9VO C12 C11 DOUB Y N 1 9VO C12 C13 SING Y N 2 9VO C11 C10 SING Y N 3 9VO C13 C14 DOUB Y N 4 9VO C10 C9 DOUB Y N 5 9VO C14 C9 SING Y N 6 9VO C9 C8 SING N N 7 9VO C4 C3 DOUB Y N 8 9VO C4 C5 SING Y N 9 9VO N7 C8 SING N N 10 9VO N7 C5 SING N N 11 9VO C3 C1 SING Y N 12 9VO C5 N6 DOUB Y N 13 9VO C1 C2 DOUB Y N 14 9VO N6 C2 SING Y N 15 9VO C1 H1 SING N N 16 9VO C2 H2 SING N N 17 9VO C3 H3 SING N N 18 9VO C4 H4 SING N N 19 9VO C8 H5 SING N N 20 9VO C8 H6 SING N N 21 9VO C11 H7 SING N N 22 9VO C12 H8 SING N N 23 9VO C13 H9 SING N N 24 9VO C14 H10 SING N N 25 9VO C10 H11 SING N N 26 9VO N7 H12 SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9VO InChI InChI 1.06 "InChI=1S/C12H12N2/c1-2-6-11(7-3-1)10-14-12-8-4-5-9-13-12/h1-9H,10H2,(H,13,14)" 9VO InChIKey InChI 1.06 WYHXNQXDQQMTQI-UHFFFAOYSA-N 9VO SMILES_CANONICAL CACTVS 3.385 "C(Nc1ccccn1)c2ccccc2" 9VO SMILES CACTVS 3.385 "C(Nc1ccccn1)c2ccccc2" 9VO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CNc2ccccn2" 9VO SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CNc2ccccn2" # _pdbx_chem_comp_identifier.comp_id 9VO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-(phenylmethyl)pyridin-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9VO "Create component" 2021-11-22 PDBE 9VO "Modify name" 2021-11-30 PDBE 9VO "Initial release" 2022-01-26 RCSB 9VO "Modify descriptor" 2022-08-22 RCSB #