data_9X1 # _chem_comp.id 9X1 _chem_comp.name "1,1'-[[1,1'-biphenyl]-4,4'-diylbis(methylene)]bis{4-[(4-chlorophenyl)(methyl)amino]quinolin-1-ium}" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C46 H38 Cl2 N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms TCD-717 _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 2017-06-21 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 717.727 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9X1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5W6O _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9X1 C1 C1 C 0 1 Y N N -2.830 -17.376 31.928 -6.817 -2.948 -0.420 C1 9X1 1 9X1 C2 C2 C 0 1 Y N N -2.148 -16.452 32.730 -7.242 -4.269 -0.473 C2 9X1 2 9X1 C3 C3 C 0 1 Y N N -1.015 -16.839 33.444 -6.316 -5.287 -0.585 C3 9X1 3 9X1 C4 C4 C 0 1 Y N N -0.541 -18.140 33.370 -4.965 -4.992 -0.646 C4 9X1 4 9X1 C5 C5 C 0 1 Y N N -1.190 -19.071 32.587 -4.538 -3.677 -0.593 C5 9X1 5 9X1 C6 C6 C 0 1 Y N N -2.324 -18.692 31.866 -5.460 -2.654 -0.481 C6 9X1 6 9X1 C22 C7 C 0 1 Y N N -3.960 -12.656 24.746 -2.442 3.656 0.990 C22 9X1 7 9X1 C24 C8 C 0 1 Y N N -6.128 -13.612 25.111 -2.469 3.433 -1.409 C24 9X1 8 9X1 C25 C9 C 0 1 Y N N -6.059 -13.243 26.470 -3.848 3.392 -1.384 C25 9X1 9 9X1 C26 C10 C 0 1 Y N N -5.071 -13.596 22.877 -0.273 3.609 -0.240 C26 9X1 10 9X1 C27 C11 C 0 1 Y N N -5.163 -14.832 22.213 0.412 3.518 -1.450 C27 9X1 11 9X1 C32 C12 C 0 1 N N N -5.094 -13.692 18.613 4.000 3.738 -0.300 C32 9X1 12 9X1 N33 N1 N 1 1 Y N N -5.389 -12.315 17.987 4.533 2.399 -0.036 N33 9X1 13 9X1 C34 C13 C 0 1 Y N N -4.275 -11.571 17.490 4.820 2.057 1.199 C34 9X1 14 9X1 C35 C14 C 0 1 Y N N -4.445 -10.307 16.930 5.327 0.803 1.513 C35 9X1 15 9X1 C36 C15 C 0 1 Y N N -5.723 -9.730 16.804 5.542 -0.123 0.504 C36 9X1 16 9X1 C37 C16 C 0 1 Y N N -6.842 -10.469 17.319 5.228 0.259 -0.823 C37 9X1 17 9X1 CL7 CL1 CL 0 0 N N N 0.815 -18.582 34.236 -3.803 -6.274 -0.787 CL7 9X1 18 9X1 N1 N2 N 0 1 N N N -3.910 -17.037 31.200 -7.752 -1.915 -0.312 N1 9X1 19 9X1 C8 C17 C 0 1 N N N -4.952 -18.104 31.054 -9.183 -2.226 -0.254 C8 9X1 20 9X1 C9 C18 C 0 1 Y N N -4.031 -15.836 30.507 -7.326 -0.596 -0.260 C9 9X1 21 9X1 C10 C19 C 0 1 Y N N -5.289 -15.233 30.428 -7.169 0.151 -1.418 C10 9X1 22 9X1 C11 C20 C 0 1 Y N N -5.510 -14.058 29.747 -6.742 1.469 -1.332 C11 9X1 23 9X1 C14 C21 C 0 1 Y N N -2.941 -15.172 29.836 -7.044 0.032 0.976 C14 9X1 24 9X1 C15 C22 C 0 1 Y N N -1.603 -15.636 29.796 -7.183 -0.653 2.191 C15 9X1 25 9X1 C16 C23 C 0 1 Y N N -0.569 -14.963 29.129 -6.900 -0.014 3.361 C16 9X1 26 9X1 C17 C24 C 0 1 Y N N -0.819 -13.782 28.478 -6.476 1.312 3.365 C17 9X1 27 9X1 C18 C25 C 0 1 Y N N -2.115 -13.307 28.498 -6.331 2.006 2.203 C18 9X1 28 9X1 C13 C26 C 0 1 Y N N -3.195 -13.954 29.145 -6.612 1.380 0.977 C13 9X1 29 9X1 N12 N3 N 1 1 Y N N -4.456 -13.413 29.115 -6.477 2.039 -0.180 N12 9X1 30 9X1 C19 C27 C 0 1 N N N -4.828 -12.175 28.367 -6.029 3.433 -0.159 C19 9X1 31 9X1 C20 C28 C 0 1 Y N N -4.941 -12.554 26.980 -4.523 3.478 -0.180 C20 9X1 32 9X1 C21 C29 C 0 1 Y N N -3.905 -12.282 26.079 -3.821 3.615 1.004 C21 9X1 33 9X1 C23 C30 C 0 1 Y N N -5.063 -13.336 24.244 -1.756 3.565 -0.219 C23 9X1 34 9X1 C31 C31 C 0 1 Y N N -5.005 -12.437 22.110 0.439 3.736 0.951 C31 9X1 35 9X1 C30 C32 C 0 1 Y N N -4.998 -12.480 20.731 1.819 3.776 0.925 C30 9X1 36 9X1 C28 C33 C 0 1 Y N N -5.165 -14.872 20.790 1.792 3.559 -1.463 C28 9X1 37 9X1 C29 C34 C 0 1 Y N N -5.087 -13.689 20.035 2.494 3.692 -0.279 C29 9X1 38 9X1 C38 C35 C 0 1 Y N N -6.642 -11.758 17.902 4.710 1.554 -1.058 C38 9X1 39 9X1 C39 C36 C 0 1 Y N N -7.766 -12.461 18.387 4.398 1.936 -2.375 C39 9X1 40 9X1 C40 C37 C 0 1 Y N N -9.057 -11.936 18.331 4.597 1.060 -3.397 C40 9X1 41 9X1 C41 C38 C 0 1 Y N N -9.266 -10.690 17.761 5.107 -0.214 -3.162 C41 9X1 42 9X1 C42 C39 C 0 1 Y N N -8.176 -9.981 17.267 5.417 -0.620 -1.898 C42 9X1 43 9X1 N43 N4 N 0 1 N N N -5.899 -8.458 16.263 6.049 -1.383 0.785 N43 9X1 44 9X1 C44 C40 C 0 1 N N N -6.583 -7.418 17.104 5.136 -2.489 1.087 C44 9X1 45 9X1 C45 C41 C 0 1 Y N N -5.317 -8.006 15.091 7.430 -1.598 0.781 C45 9X1 46 9X1 C46 C42 C 0 1 Y N N -5.498 -6.650 14.690 7.939 -2.859 1.063 C46 9X1 47 9X1 C47 C43 C 0 1 Y N N -4.927 -6.118 13.543 9.304 -3.069 1.058 C47 9X1 48 9X1 C48 C44 C 0 1 Y N N -4.144 -6.926 12.735 10.165 -2.023 0.773 C48 9X1 49 9X1 CL5 CL2 CL 0 0 N N N -3.491 -6.266 11.365 11.880 -2.289 0.776 CL5 9X1 50 9X1 C49 C45 C 0 1 Y N N -3.926 -8.259 13.081 9.660 -0.766 0.492 C49 9X1 51 9X1 C50 C46 C 0 1 Y N N -4.499 -8.791 14.239 8.296 -0.552 0.490 C50 9X1 52 9X1 H1 H1 H 0 1 N N N -2.502 -15.434 32.796 -8.296 -4.500 -0.425 H1 9X1 53 9X1 H2 H2 H 0 1 N N N -0.501 -16.118 34.062 -6.646 -6.315 -0.625 H2 9X1 54 9X1 H3 H3 H 0 1 N N N -0.824 -20.086 32.532 -3.484 -3.449 -0.640 H3 9X1 55 9X1 H4 H4 H 0 1 N N N -2.825 -19.422 31.247 -5.127 -1.628 -0.441 H4 9X1 56 9X1 H5 H5 H 0 1 N N N -3.136 -12.416 24.090 -1.895 3.763 1.916 H5 9X1 57 9X1 H6 H6 H 0 1 N N N -7.009 -14.111 24.736 -1.943 3.367 -2.350 H6 9X1 58 9X1 H7 H7 H 0 1 N N N -6.876 -13.492 27.131 -4.401 3.295 -2.307 H7 9X1 59 9X1 H8 H8 H 0 1 N N N -5.232 -15.748 22.781 -0.135 3.414 -2.375 H8 9X1 60 9X1 H9 H9 H 0 1 N N N -5.864 -14.400 18.272 4.353 4.427 0.467 H9 9X1 61 9X1 H10 H10 H 0 1 N N N -4.107 -14.027 18.263 4.339 4.077 -1.278 H10 9X1 62 9X1 H11 H11 H 0 1 N N N -3.284 -11.996 17.550 4.656 2.770 1.992 H11 9X1 63 9X1 H12 H12 H 0 1 N N N -3.580 -9.759 16.586 5.554 0.551 2.538 H12 9X1 64 9X1 H13 H13 H 0 1 N N N -4.681 -18.970 31.676 -9.483 -2.361 0.785 H13 9X1 65 9X1 H14 H14 H 0 1 N N N -5.927 -17.711 31.378 -9.751 -1.405 -0.693 H14 9X1 66 9X1 H15 H15 H 0 1 N N N -5.014 -18.414 30.000 -9.379 -3.142 -0.811 H15 9X1 67 9X1 H16 H16 H 0 1 N N N -6.123 -15.709 30.922 -7.379 -0.290 -2.381 H16 9X1 68 9X1 H17 H17 H 0 1 N N N -6.504 -13.638 29.704 -6.622 2.041 -2.240 H17 9X1 69 9X1 H18 H18 H 0 1 N N N -1.366 -16.558 30.307 -7.512 -1.682 2.200 H18 9X1 70 9X1 H19 H19 H 0 1 N N N 0.429 -15.377 29.128 -7.008 -0.543 4.297 H19 9X1 71 9X1 H20 H20 H 0 1 N N N -0.032 -13.244 27.969 -6.259 1.797 4.305 H20 9X1 72 9X1 H21 H21 H 0 1 N N N -2.319 -12.379 27.985 -6.001 3.034 2.224 H21 9X1 73 9X1 H22 H22 H 0 1 N N N -4.049 -11.408 28.489 -6.420 3.954 -1.033 H22 9X1 74 9X1 H23 H23 H 0 1 N N N -5.788 -11.783 28.734 -6.394 3.919 0.746 H23 9X1 75 9X1 H24 H24 H 0 1 N N N -3.029 -11.761 26.436 -4.354 3.689 1.941 H24 9X1 76 9X1 H25 H25 H 0 1 N N N -4.958 -11.479 22.607 -0.087 3.803 1.891 H25 9X1 77 9X1 H26 H26 H 0 1 N N N -4.922 -11.557 20.176 2.372 3.875 1.848 H26 9X1 78 9X1 H27 H27 H 0 1 N N N -5.227 -15.824 20.284 2.324 3.489 -2.400 H27 9X1 79 9X1 H28 H28 H 0 1 N N N -7.621 -13.441 18.817 4.001 2.920 -2.574 H28 9X1 80 9X1 H29 H29 H 0 1 N N N -9.889 -12.497 18.730 4.355 1.357 -4.407 H29 9X1 81 9X1 H30 H30 H 0 1 N N N -10.261 -10.275 17.701 5.256 -0.891 -3.991 H30 9X1 82 9X1 H31 H31 H 0 1 N N N -8.352 -9.013 16.822 5.808 -1.612 -1.727 H31 9X1 83 9X1 H32 H32 H 0 1 N N N -7.005 -7.892 18.003 4.870 -3.002 0.163 H32 9X1 84 9X1 H33 H33 H 0 1 N N N -5.854 -6.650 17.402 5.625 -3.189 1.764 H33 9X1 85 9X1 H34 H34 H 0 1 N N N -7.391 -6.950 16.523 4.235 -2.097 1.558 H34 9X1 86 9X1 H35 H35 H 0 1 N N N -6.108 -6.007 15.308 7.267 -3.675 1.286 H35 9X1 87 9X1 H36 H36 H 0 1 N N N -5.092 -5.083 13.282 9.700 -4.049 1.278 H36 9X1 88 9X1 H37 H37 H 0 1 N N N -3.311 -8.884 12.450 10.335 0.049 0.271 H37 9X1 89 9X1 H38 H38 H 0 1 N N N -4.315 -9.825 14.491 7.903 0.430 0.270 H38 9X1 90 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9X1 CL5 C48 SING N N 1 9X1 C48 C49 DOUB Y N 2 9X1 C48 C47 SING Y N 3 9X1 C49 C50 SING Y N 4 9X1 C47 C46 DOUB Y N 5 9X1 C50 C45 DOUB Y N 6 9X1 C46 C45 SING Y N 7 9X1 C45 N43 SING N N 8 9X1 N43 C36 SING N N 9 9X1 N43 C44 SING N N 10 9X1 C36 C35 DOUB Y N 11 9X1 C36 C37 SING Y N 12 9X1 C35 C34 SING Y N 13 9X1 C42 C37 DOUB Y N 14 9X1 C42 C41 SING Y N 15 9X1 C37 C38 SING Y N 16 9X1 C34 N33 DOUB Y N 17 9X1 C41 C40 DOUB Y N 18 9X1 C38 N33 SING Y N 19 9X1 C38 C39 DOUB Y N 20 9X1 N33 C32 SING N N 21 9X1 C40 C39 SING Y N 22 9X1 C32 C29 SING N N 23 9X1 C29 C30 DOUB Y N 24 9X1 C29 C28 SING Y N 25 9X1 C30 C31 SING Y N 26 9X1 C28 C27 DOUB Y N 27 9X1 C31 C26 DOUB Y N 28 9X1 C27 C26 SING Y N 29 9X1 C26 C23 SING N N 30 9X1 C23 C22 DOUB Y N 31 9X1 C23 C24 SING Y N 32 9X1 C22 C21 SING Y N 33 9X1 C24 C25 DOUB Y N 34 9X1 C21 C20 DOUB Y N 35 9X1 C25 C20 SING Y N 36 9X1 C20 C19 SING N N 37 9X1 C19 N12 SING N N 38 9X1 C17 C18 DOUB Y N 39 9X1 C17 C16 SING Y N 40 9X1 C18 C13 SING Y N 41 9X1 N12 C13 DOUB Y N 42 9X1 N12 C11 SING Y N 43 9X1 C16 C15 DOUB Y N 44 9X1 C13 C14 SING Y N 45 9X1 C11 C10 DOUB Y N 46 9X1 C15 C14 SING Y N 47 9X1 C14 C9 DOUB Y N 48 9X1 C10 C9 SING Y N 49 9X1 C9 N1 SING N N 50 9X1 C8 N1 SING N N 51 9X1 N1 C1 SING N N 52 9X1 C6 C1 DOUB Y N 53 9X1 C6 C5 SING Y N 54 9X1 C1 C2 SING Y N 55 9X1 C5 C4 DOUB Y N 56 9X1 C2 C3 DOUB Y N 57 9X1 C4 C3 SING Y N 58 9X1 C4 CL7 SING N N 59 9X1 C2 H1 SING N N 60 9X1 C3 H2 SING N N 61 9X1 C5 H3 SING N N 62 9X1 C6 H4 SING N N 63 9X1 C22 H5 SING N N 64 9X1 C24 H6 SING N N 65 9X1 C25 H7 SING N N 66 9X1 C27 H8 SING N N 67 9X1 C32 H9 SING N N 68 9X1 C32 H10 SING N N 69 9X1 C34 H11 SING N N 70 9X1 C35 H12 SING N N 71 9X1 C8 H13 SING N N 72 9X1 C8 H14 SING N N 73 9X1 C8 H15 SING N N 74 9X1 C10 H16 SING N N 75 9X1 C11 H17 SING N N 76 9X1 C15 H18 SING N N 77 9X1 C16 H19 SING N N 78 9X1 C17 H20 SING N N 79 9X1 C18 H21 SING N N 80 9X1 C19 H22 SING N N 81 9X1 C19 H23 SING N N 82 9X1 C21 H24 SING N N 83 9X1 C31 H25 SING N N 84 9X1 C30 H26 SING N N 85 9X1 C28 H27 SING N N 86 9X1 C39 H28 SING N N 87 9X1 C40 H29 SING N N 88 9X1 C41 H30 SING N N 89 9X1 C42 H31 SING N N 90 9X1 C44 H32 SING N N 91 9X1 C44 H33 SING N N 92 9X1 C44 H34 SING N N 93 9X1 C46 H35 SING N N 94 9X1 C47 H36 SING N N 95 9X1 C49 H37 SING N N 96 9X1 C50 H38 SING N N 97 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9X1 SMILES ACDLabs 12.01 "c1(ccc(Cl)cc1)N(C)c2cc[n+](c3c2cccc3)Cc4ccc(cc4)c8ccc(C[n+]5ccc(c6c5cccc6)N(C)c7ccc(cc7)Cl)cc8" 9X1 InChI InChI 1.03 "InChI=1S/C46H38Cl2N4/c1-49(39-23-19-37(47)20-24-39)43-27-29-51(45-9-5-3-7-41(43)45)31-33-11-15-35(16-12-33)36-17-13-34(14-18-36)32-52-30-28-44(42-8-4-6-10-46(42)52)50(2)40-25-21-38(48)22-26-40/h3-30H,31-32H2,1-2H3/q+2" 9X1 InChIKey InChI 1.03 QGYGTMZEJNOHNU-UHFFFAOYSA-N 9X1 SMILES_CANONICAL CACTVS 3.385 "CN(c1ccc(Cl)cc1)c2cc[n+](Cc3ccc(cc3)c4ccc(C[n+]5ccc(N(C)c6ccc(Cl)cc6)c7ccccc57)cc4)c8ccccc28" 9X1 SMILES CACTVS 3.385 "CN(c1ccc(Cl)cc1)c2cc[n+](Cc3ccc(cc3)c4ccc(C[n+]5ccc(N(C)c6ccc(Cl)cc6)c7ccccc57)cc4)c8ccccc28" 9X1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CN(c1ccc(cc1)Cl)c2cc[n+](c3c2cccc3)Cc4ccc(cc4)c5ccc(cc5)C[n+]6ccc(c7c6cccc7)N(C)c8ccc(cc8)Cl" 9X1 SMILES "OpenEye OEToolkits" 2.0.6 "CN(c1ccc(cc1)Cl)c2cc[n+](c3c2cccc3)Cc4ccc(cc4)c5ccc(cc5)C[n+]6ccc(c7c6cccc7)N(C)c8ccc(cc8)Cl" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9X1 "SYSTEMATIC NAME" ACDLabs 12.01 "1,1'-[[1,1'-biphenyl]-4,4'-diylbis(methylene)]bis{4-[(4-chlorophenyl)(methyl)amino]quinolin-1-ium}" 9X1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-(4-chlorophenyl)-1-[[4-[4-[[4-[(4-chlorophenyl)-methyl-amino]quinolin-1-ium-1-yl]methyl]phenyl]phenyl]methyl]-~{N}-methyl-quinolin-1-ium-4-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9X1 "Create component" 2017-06-21 RCSB 9X1 "Initial release" 2018-02-14 RCSB 9X1 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 9X1 _pdbx_chem_comp_synonyms.name TCD-717 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##