data_9XM # _chem_comp.id 9XM _chem_comp.name "[(2~{R},3~{S})-2-[3-(7-bromanyl-6-chloranyl-4-oxidanylidene-quinazolin-3-yl)-2-oxidanylidene-propyl]piperidin-3-yl] ~{N}-[4-[[3-(2,3-dihydro-1~{H}-inden-2-ylcarbamoyl)pyrazin-2-yl]carbamoyl]piperazin-1-yl]sulfonylcarbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C36 H38 Br Cl N10 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-11-22 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 886.171 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9XM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7QC1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9XM N1 N1 N 0 1 N N N 52.467 176.546 27.120 5.016 -0.427 -0.937 N1 9XM 1 9XM N3 N2 N 0 1 N N N 54.183 179.422 23.422 -0.937 3.950 2.502 N3 9XM 2 9XM C4 C1 C 0 1 N N N 53.771 176.140 27.035 5.687 -0.422 -2.118 C4 9XM 3 9XM C5 C2 C 0 1 N N N 51.802 177.127 25.958 3.706 0.221 -0.844 C5 9XM 4 9XM C6 C3 C 0 1 N N N 51.665 178.650 26.066 3.886 1.663 -0.443 C6 9XM 5 9XM C7 C4 C 0 1 N N N 50.547 179.273 25.273 2.682 2.555 -0.277 C7 9XM 6 9XM C8 C5 C 0 1 N N R 50.773 180.748 24.922 3.139 3.957 0.131 C8 9XM 7 9XM C10 C6 C 0 1 N N N 51.141 183.321 24.451 3.225 6.816 -0.325 C10 9XM 8 9XM C13 C7 C 0 1 N N N 52.905 179.262 22.923 -0.174 4.461 1.516 C13 9XM 9 9XM C15 C8 C 0 1 N N N 58.001 179.270 21.057 -4.762 4.080 -0.585 C15 9XM 10 9XM C17 C9 C 0 1 N N N 57.193 177.081 22.219 -3.641 2.051 1.253 C17 9XM 11 9XM C20 C10 C 0 1 Y N N 62.460 178.535 25.063 -7.065 -1.201 -2.512 C20 9XM 12 9XM C21 C11 C 0 1 Y N N 64.170 180.022 25.275 -7.471 -1.230 -4.768 C21 9XM 13 9XM C22 C12 C 0 1 Y N N 63.565 180.861 24.355 -7.050 0.089 -4.865 C22 9XM 14 9XM C24 C13 C 0 1 N N N 61.866 175.455 27.195 -7.572 -3.809 0.206 C24 9XM 15 9XM C26 C14 C 0 1 Y N N 63.588 174.436 28.479 -8.435 -5.865 1.168 C26 9XM 16 9XM C28 C15 C 0 1 N N N 62.371 174.205 26.456 -8.887 -3.547 0.969 C28 9XM 17 9XM N N3 N 0 1 N N N 54.484 175.668 27.991 6.849 -0.979 -2.282 N 9XM 18 9XM C C16 C 0 1 Y N N 52.681 175.280 31.735 8.722 -2.902 0.867 C 9XM 19 9XM O O1 O 0 1 N N N 52.411 179.315 26.747 4.994 2.103 -0.254 O 9XM 20 9XM C1 C17 C 0 1 Y N N 54.015 174.945 31.551 9.338 -2.850 -0.379 C1 9XM 21 9XM C11 C18 C 0 1 N N N 52.400 182.522 24.167 2.375 6.235 0.809 C11 9XM 22 9XM C12 C19 C 0 1 N N S 52.148 181.036 24.335 1.914 4.828 0.421 C12 9XM 23 9XM C14 C20 C 0 1 N N N 56.716 179.467 21.839 -3.306 4.155 -0.111 C14 9XM 24 9XM C16 C21 C 0 1 N N N 58.495 177.618 22.788 -5.098 1.975 0.779 C16 9XM 25 9XM C18 C22 C 0 1 N N N 60.080 179.418 22.334 -5.716 2.061 -1.588 C18 9XM 26 9XM C19 C23 C 0 1 Y N N 61.862 179.379 24.112 -6.645 0.135 -2.609 C19 9XM 27 9XM C2 C24 C 0 1 Y N N 54.608 175.071 30.305 8.731 -2.214 -1.440 C2 9XM 28 9XM C23 C25 C 0 1 N N N 61.838 177.243 25.510 -7.064 -1.886 -1.203 C23 9XM 29 9XM C25 C26 C 0 1 N N N 62.334 175.250 28.646 -7.594 -5.341 0.023 C25 9XM 30 9XM C27 C27 C 0 1 Y N N 63.622 173.862 27.217 -9.178 -4.833 1.711 C27 9XM 31 9XM C29 C28 C 0 1 Y N N 64.729 173.114 26.823 -10.025 -5.082 2.778 C29 9XM 32 9XM C3 C29 C 0 1 Y N N 53.861 175.556 29.232 7.482 -1.615 -1.264 C3 9XM 33 9XM C30 C30 C 0 1 Y N N 65.793 172.943 27.695 -10.130 -6.357 3.300 C30 9XM 34 9XM C31 C31 C 0 1 Y N N 65.755 173.507 28.958 -9.387 -7.388 2.756 C31 9XM 35 9XM C32 C32 C 0 1 Y N N 64.654 174.250 29.354 -8.541 -7.141 1.692 C32 9XM 36 9XM C33 C33 C 0 1 N N N 51.753 176.464 28.309 5.545 -1.030 0.154 C33 9XM 37 9XM C34 C34 C 0 1 Y N N 52.526 175.924 29.429 6.859 -1.670 0.003 C34 9XM 38 9XM C35 C35 C 0 1 Y N N 51.935 175.779 30.684 7.490 -2.318 1.064 C35 9XM 39 9XM C9 C36 C 0 1 N N N 50.650 183.041 25.837 4.412 5.888 -0.593 C9 9XM 40 9XM N2 N4 N 0 1 N N N 50.574 181.598 26.101 3.918 4.555 -0.961 N2 9XM 41 9XM N4 N5 N 0 1 N N N 56.181 178.152 22.242 -3.193 3.448 1.173 N4 9XM 42 9XM N5 N6 N 0 1 N N N 59.028 178.670 21.915 -5.211 2.682 -0.505 N5 9XM 43 9XM N6 N7 N 0 1 N N N 60.687 178.987 23.470 -6.225 0.817 -1.476 N6 9XM 44 9XM N7 N8 N 0 1 Y N N 63.628 178.851 25.645 -7.470 -1.844 -3.603 N7 9XM 45 9XM N8 N9 N 0 1 Y N N 62.404 180.552 23.758 -6.650 0.742 -3.789 N8 9XM 46 9XM N9 N10 N 0 1 N N N 62.373 176.699 26.614 -7.573 -3.129 -1.092 N9 9XM 47 9XM O1 O2 O 0 1 N N N 52.244 180.434 23.019 1.155 4.248 1.514 O1 9XM 48 9XM O2 O3 O 0 1 N N N 52.430 178.218 22.531 -0.686 5.114 0.628 O2 9XM 49 9XM O3 O4 O 0 1 N N N 54.554 176.896 23.453 -3.087 3.526 3.637 O3 9XM 50 9XM O4 O5 O 0 1 N N N 56.062 178.451 24.649 -2.756 5.605 2.290 O4 9XM 51 9XM O5 O6 O 0 1 N N N 60.422 180.422 21.726 -5.715 2.622 -2.667 O5 9XM 52 9XM O6 O7 O 0 1 N N N 60.901 176.733 24.896 -6.603 -1.329 -0.225 O6 9XM 53 9XM O7 O8 O 0 1 N N N 50.596 176.835 28.384 4.954 -1.041 1.219 O7 9XM 54 9XM S S1 S 0 1 N N N 55.254 178.139 23.516 -2.572 4.212 2.504 S 9XM 55 9XM BR BR1 BR 0 0 N N N 55.083 174.360 33.003 11.029 -3.661 -0.621 BR 9XM 56 9XM CL CL1 CL 0 0 N N N 51.914 175.067 33.271 9.512 -3.711 2.184 CL 9XM 57 9XM H1 H1 H 0 1 N N N 54.475 180.326 23.735 -0.529 3.429 3.211 H1 9XM 58 9XM H2 H2 H 0 1 N N N 54.246 176.225 26.069 5.231 0.070 -2.964 H2 9XM 59 9XM H3 H3 H 0 1 N N N 50.798 176.687 25.869 3.207 0.173 -1.812 H3 9XM 60 9XM H4 H4 H 0 1 N N N 52.388 176.888 25.059 3.099 -0.291 -0.097 H4 9XM 61 9XM H5 H5 H 0 1 N N N 49.621 179.196 25.862 2.138 2.610 -1.220 H5 9XM 62 9XM H6 H6 H 0 1 N N N 50.433 178.709 24.336 2.030 2.146 0.495 H6 9XM 63 9XM H7 H7 H 0 1 N N N 50.024 181.026 24.166 3.758 3.891 1.025 H7 9XM 64 9XM H8 H8 H 0 1 N N N 51.363 184.394 24.354 2.619 6.902 -1.227 H8 9XM 65 9XM H9 H9 H 0 1 N N N 50.362 183.041 23.727 3.592 7.801 -0.037 H9 9XM 66 9XM H10 H10 H 0 1 N N N 57.808 178.605 20.202 -5.389 4.702 0.054 H10 9XM 67 9XM H11 H11 H 0 1 N N N 58.357 180.244 20.691 -4.830 4.427 -1.616 H11 9XM 68 9XM H12 H12 H 0 1 N N N 56.846 176.233 22.828 -3.574 1.704 2.284 H12 9XM 69 9XM H13 H13 H 0 1 N N N 57.353 176.747 21.183 -3.015 1.428 0.614 H13 9XM 70 9XM H14 H14 H 0 1 N N N 65.112 180.320 25.711 -7.800 -1.755 -5.653 H14 9XM 71 9XM H15 H15 H 0 1 N N N 64.044 181.797 24.109 -7.054 0.585 -5.825 H15 9XM 72 9XM H16 H16 H 0 1 N N N 60.766 175.457 27.175 -6.711 -3.502 0.801 H16 9XM 73 9XM H17 H17 H 0 1 N N N 61.637 173.388 26.509 -8.759 -2.724 1.673 H17 9XM 74 9XM H18 H18 H 0 1 N N N 62.595 174.429 25.403 -9.693 -3.324 0.269 H18 9XM 75 9XM H19 H19 H 0 1 N N N 53.190 182.834 24.866 2.970 6.185 1.721 H19 9XM 76 9XM H20 H20 H 0 1 N N N 52.725 182.718 23.135 1.506 6.871 0.974 H20 9XM 77 9XM H21 H21 H 0 1 N N N 52.917 180.614 24.999 1.288 4.883 -0.469 H21 9XM 78 9XM H22 H22 H 0 1 N N N 56.921 180.070 22.736 -2.656 3.683 -0.847 H22 9XM 79 9XM H23 H23 H 0 1 N N N 55.979 179.986 21.209 -3.018 5.198 0.020 H23 9XM 80 9XM H24 H24 H 0 1 N N N 59.226 176.799 22.860 -5.386 0.932 0.648 H24 9XM 81 9XM H25 H25 H 0 1 N N N 58.311 178.034 23.789 -5.748 2.445 1.516 H25 9XM 82 9XM H26 H26 H 0 1 N N N 55.643 174.795 30.166 9.218 -2.180 -2.403 H26 9XM 83 9XM H27 H27 H 0 1 N N N 62.548 176.213 29.133 -8.052 -5.601 -0.932 H27 9XM 84 9XM H28 H28 H 0 1 N N N 61.581 174.702 29.232 -6.583 -5.744 0.080 H28 9XM 85 9XM H29 H29 H 0 1 N N N 64.758 172.668 25.840 -10.605 -4.277 3.203 H29 9XM 86 9XM H30 H30 H 0 1 N N N 66.654 172.368 27.388 -10.791 -6.548 4.132 H30 9XM 87 9XM H31 H31 H 0 1 N N N 66.584 173.368 29.636 -9.467 -8.385 3.163 H31 9XM 88 9XM H32 H32 H 0 1 N N N 64.623 174.685 30.342 -7.960 -7.948 1.268 H32 9XM 89 9XM H33 H33 H 0 1 N N N 50.902 176.055 30.833 7.016 -2.362 2.033 H33 9XM 90 9XM H34 H34 H 0 1 N N N 51.340 183.501 26.560 5.011 6.291 -1.410 H34 9XM 91 9XM H35 H35 H 0 1 N N N 49.648 183.479 25.956 5.025 5.813 0.305 H35 9XM 92 9XM H36 H36 H 0 1 N N N 49.671 181.398 26.480 4.679 3.951 -1.235 H36 9XM 93 9XM H38 H38 H 0 1 N N N 60.199 178.248 23.935 -6.296 0.400 -0.604 H38 9XM 94 9XM H39 H39 H 0 1 N N N 63.144 177.159 27.054 -7.941 -3.574 -1.872 H39 9XM 95 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9XM C15 C14 SING N N 1 9XM C15 N5 SING N N 2 9XM O5 C18 DOUB N N 3 9XM C14 N4 SING N N 4 9XM N5 C18 SING N N 5 9XM N5 C16 SING N N 6 9XM C17 N4 SING N N 7 9XM C17 C16 SING N N 8 9XM N4 S SING N N 9 9XM C18 N6 SING N N 10 9XM O2 C13 DOUB N N 11 9XM C13 O1 SING N N 12 9XM C13 N3 SING N N 13 9XM O1 C12 SING N N 14 9XM N3 S SING N N 15 9XM O3 S DOUB N N 16 9XM N6 C19 SING N N 17 9XM S O4 DOUB N N 18 9XM N8 C19 DOUB Y N 19 9XM N8 C22 SING Y N 20 9XM C19 C20 SING Y N 21 9XM C11 C12 SING N N 22 9XM C11 C10 SING N N 23 9XM C12 C8 SING N N 24 9XM C22 C21 DOUB Y N 25 9XM C10 C9 SING N N 26 9XM O6 C23 DOUB N N 27 9XM C8 C7 SING N N 28 9XM C8 N2 SING N N 29 9XM C20 C23 SING N N 30 9XM C20 N7 DOUB Y N 31 9XM C7 C6 SING N N 32 9XM C21 N7 SING Y N 33 9XM C23 N9 SING N N 34 9XM C9 N2 SING N N 35 9XM C5 C6 SING N N 36 9XM C5 N1 SING N N 37 9XM C6 O DOUB N N 38 9XM C28 C24 SING N N 39 9XM C28 C27 SING N N 40 9XM N9 C24 SING N N 41 9XM C29 C27 DOUB Y N 42 9XM C29 C30 SING Y N 43 9XM C4 N1 SING N N 44 9XM C4 N DOUB N N 45 9XM N1 C33 SING N N 46 9XM C24 C25 SING N N 47 9XM C27 C26 SING Y N 48 9XM C30 C31 DOUB Y N 49 9XM N C3 SING N N 50 9XM C33 O7 DOUB N N 51 9XM C33 C34 SING N N 52 9XM C26 C25 SING N N 53 9XM C26 C32 DOUB Y N 54 9XM C31 C32 SING Y N 55 9XM C3 C34 DOUB Y N 56 9XM C3 C2 SING Y N 57 9XM C34 C35 SING Y N 58 9XM C2 C1 DOUB Y N 59 9XM C35 C DOUB Y N 60 9XM C1 C SING Y N 61 9XM C1 BR SING N N 62 9XM C CL SING N N 63 9XM N3 H1 SING N N 64 9XM C4 H2 SING N N 65 9XM C5 H3 SING N N 66 9XM C5 H4 SING N N 67 9XM C7 H5 SING N N 68 9XM C7 H6 SING N N 69 9XM C8 H7 SING N N 70 9XM C10 H8 SING N N 71 9XM C10 H9 SING N N 72 9XM C15 H10 SING N N 73 9XM C15 H11 SING N N 74 9XM C17 H12 SING N N 75 9XM C17 H13 SING N N 76 9XM C21 H14 SING N N 77 9XM C22 H15 SING N N 78 9XM C24 H16 SING N N 79 9XM C28 H17 SING N N 80 9XM C28 H18 SING N N 81 9XM C11 H19 SING N N 82 9XM C11 H20 SING N N 83 9XM C12 H21 SING N N 84 9XM C14 H22 SING N N 85 9XM C14 H23 SING N N 86 9XM C16 H24 SING N N 87 9XM C16 H25 SING N N 88 9XM C2 H26 SING N N 89 9XM C25 H27 SING N N 90 9XM C25 H28 SING N N 91 9XM C29 H29 SING N N 92 9XM C30 H30 SING N N 93 9XM C31 H31 SING N N 94 9XM C32 H32 SING N N 95 9XM C35 H33 SING N N 96 9XM C9 H34 SING N N 97 9XM C9 H35 SING N N 98 9XM N2 H36 SING N N 99 9XM N6 H38 SING N N 100 9XM N9 H39 SING N N 101 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9XM InChI InChI 1.06 "InChI=1S/C36H38BrClN10O8S/c37-26-18-28-25(17-27(26)38)34(51)47(20-42-28)19-24(49)16-29-30(6-3-7-39-29)56-36(53)45-57(54,55)48-12-10-46(11-13-48)35(52)44-32-31(40-8-9-41-32)33(50)43-23-14-21-4-1-2-5-22(21)15-23/h1-2,4-5,8-9,17-18,20,23,29-30,39H,3,6-7,10-16,19H2,(H,43,50)(H,45,53)(H,41,44,52)/t29-,30+/m1/s1" 9XM InChIKey InChI 1.06 LACGGYFSTYXEOM-IHLOFXLRSA-N 9XM SMILES_CANONICAL CACTVS 3.385 "Clc1cc2C(=O)N(CC(=O)C[C@H]3NCCC[C@@H]3OC(=O)N[S](=O)(=O)N4CCN(CC4)C(=O)Nc5nccnc5C(=O)NC6Cc7ccccc7C6)C=Nc2cc1Br" 9XM SMILES CACTVS 3.385 "Clc1cc2C(=O)N(CC(=O)C[CH]3NCCC[CH]3OC(=O)N[S](=O)(=O)N4CCN(CC4)C(=O)Nc5nccnc5C(=O)NC6Cc7ccccc7C6)C=Nc2cc1Br" 9XM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)CC(C2)NC(=O)c3c(nccn3)NC(=O)N4CCN(CC4)S(=O)(=O)NC(=O)O[C@H]5CCCN[C@@H]5CC(=O)CN6C=Nc7cc(c(cc7C6=O)Cl)Br" 9XM SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)CC(C2)NC(=O)c3c(nccn3)NC(=O)N4CCN(CC4)S(=O)(=O)NC(=O)OC5CCCNC5CC(=O)CN6C=Nc7cc(c(cc7C6=O)Cl)Br" # _pdbx_chem_comp_identifier.comp_id 9XM _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{S})-2-[3-(7-bromanyl-6-chloranyl-4-oxidanylidene-quinazolin-3-yl)-2-oxidanylidene-propyl]piperidin-3-yl] ~{N}-[4-[[3-(2,3-dihydro-1~{H}-inden-2-ylcarbamoyl)pyrazin-2-yl]carbamoyl]piperazin-1-yl]sulfonylcarbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9XM "Create component" 2021-11-22 PDBE 9XM "Initial release" 2021-12-08 RCSB 9XM "Modify descriptor" 2022-08-22 RCSB #