data_9XY
#
_chem_comp.id 9XY
_chem_comp.name Endoxifen
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H27 N O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "4-[(1Z)-1-{4-[2-(methylamino)ethoxy]phenyl}-2-phenylbut-1-en-1-yl]phenol"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-06-26
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 373.487
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 9XY
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5W9D
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9XY CBC C1 C 0 1 N N N 18.952 24.781 -22.388 8.016 1.225 0.076 CBC 9XY 1
9XY NBB N1 N 0 1 N N N 20.317 25.419 -22.207 6.595 0.979 -0.203 NBB 9XY 2
9XY CBA C2 C 0 1 N N N 20.545 25.643 -20.723 5.842 2.239 -0.252 CBA 9XY 3
9XY CAZ C3 C 0 1 N N N 19.488 26.600 -20.146 4.369 1.943 -0.543 CAZ 9XY 4
9XY OAY O1 O 0 1 N N N 19.848 26.917 -18.790 3.807 1.208 0.545 OAY 9XY 5
9XY CAN C4 C 0 1 Y N N 18.975 26.746 -17.781 2.497 0.862 0.444 CAN 9XY 6
9XY CAM C5 C 0 1 Y N N 17.692 26.306 -18.007 1.771 1.219 -0.684 CAM 9XY 7
9XY CAL C6 C 0 1 Y N N 16.872 26.038 -16.932 0.442 0.871 -0.790 CAL 9XY 8
9XY CAO C7 C 0 1 Y N N 19.406 27.068 -16.504 1.888 0.147 1.468 CAO 9XY 9
9XY CAP C8 C 0 1 Y N N 18.540 26.872 -15.445 0.559 -0.206 1.369 CAP 9XY 10
9XY CAI C9 C 0 1 Y N N 17.184 26.453 -15.627 -0.175 0.157 0.239 CAI 9XY 11
9XY CAH C10 C 0 1 N N N 16.350 26.094 -14.515 -1.602 -0.219 0.129 CAH 9XY 12
9XY CAE C11 C 0 1 Y N N 15.814 24.796 -14.615 -2.643 0.832 0.101 CAE 9XY 13
9XY CAD C12 C 0 1 Y N N 16.641 23.681 -14.932 -3.513 0.984 1.182 CAD 9XY 14
9XY CAC C13 C 0 1 Y N N 16.039 22.430 -15.047 -4.482 1.964 1.152 CAC 9XY 15
9XY CAB C14 C 0 1 Y N N 14.673 22.204 -14.770 -4.594 2.799 0.048 CAB 9XY 16
9XY OAG O2 O 0 1 N N N 14.088 20.992 -14.944 -5.550 3.764 0.022 OAG 9XY 17
9XY CAA C15 C 0 1 Y N N 13.859 23.250 -14.395 -3.730 2.651 -1.030 CAA 9XY 18
9XY CAF C16 C 0 1 Y N N 14.460 24.535 -14.253 -2.755 1.677 -1.005 CAF 9XY 19
9XY CAJ C17 C 0 1 N N N 16.117 27.077 -13.416 -1.955 -1.526 0.055 CAJ 9XY 20
9XY CAQ C18 C 0 1 N N N 15.436 26.668 -12.095 -3.411 -1.914 0.060 CAQ 9XY 21
9XY CAS C19 C 0 1 N N N 14.111 27.406 -11.991 -3.904 -2.063 -1.381 CAS 9XY 22
9XY CAR C20 C 0 1 Y N N 16.711 28.335 -13.511 -0.917 -2.564 -0.031 CAR 9XY 23
9XY CAT C21 C 0 1 Y N N 16.258 29.094 -14.630 -0.077 -2.628 -1.148 CAT 9XY 24
9XY CAU C22 C 0 1 Y N N 16.559 30.448 -14.832 0.894 -3.604 -1.221 CAU 9XY 25
9XY CAV C23 C 0 1 Y N N 17.257 31.103 -13.804 1.039 -4.519 -0.193 CAV 9XY 26
9XY CAW C24 C 0 1 Y N N 17.579 30.387 -12.639 0.212 -4.463 0.916 CAW 9XY 27
9XY CAX C25 C 0 1 Y N N 17.165 29.091 -12.495 -0.761 -3.489 1.006 CAX 9XY 28
9XY H1 H1 H 0 1 N N N 18.766 24.610 -23.458 8.116 1.729 1.037 H1 9XY 29
9XY H2 H2 H 0 1 N N N 18.922 23.821 -21.852 8.550 0.275 0.106 H2 9XY 30
9XY H3 H3 H 0 1 N N N 18.178 25.450 -21.984 8.437 1.853 -0.709 H3 9XY 31
9XY H4 H4 H 0 1 N N N 21.025 24.813 -22.570 6.479 0.455 -1.058 H4 9XY 32
9XY H6 H6 H 0 1 N N N 20.482 24.678 -20.199 5.926 2.750 0.707 H6 9XY 33
9XY H7 H7 H 0 1 N N N 21.545 26.077 -20.573 6.247 2.875 -1.039 H7 9XY 34
9XY H8 H8 H 0 1 N N N 19.455 27.521 -20.746 3.828 2.880 -0.667 H8 9XY 35
9XY H9 H9 H 0 1 N N N 18.500 26.116 -20.164 4.292 1.354 -1.458 H9 9XY 36
9XY H10 H10 H 0 1 N N N 17.331 26.172 -19.016 2.249 1.772 -1.480 H10 9XY 37
9XY H11 H11 H 0 1 N N N 15.957 25.489 -17.099 -0.122 1.150 -1.668 H11 9XY 38
9XY H12 H12 H 0 1 N N N 20.397 27.464 -16.340 2.457 -0.133 2.342 H12 9XY 39
9XY H13 H13 H 0 1 N N N 18.901 27.042 -14.441 0.087 -0.762 2.165 H13 9XY 40
9XY H14 H14 H 0 1 N N N 17.704 23.802 -15.079 -3.427 0.335 2.040 H14 9XY 41
9XY H15 H15 H 0 1 N N N 16.645 21.594 -15.363 -5.156 2.082 1.987 H15 9XY 42
9XY H16 H16 H 0 1 N N N 13.170 21.045 -14.704 -5.263 4.612 0.388 H16 9XY 43
9XY H17 H17 H 0 1 N N N 12.804 23.102 -14.215 -3.820 3.302 -1.887 H17 9XY 44
9XY H18 H18 H 0 1 N N N 13.865 25.344 -13.855 -2.080 1.566 -1.841 H18 9XY 45
9XY H19 H19 H 0 1 N N N 15.258 25.582 -12.089 -3.532 -2.862 0.585 H19 9XY 46
9XY H20 H20 H 0 1 N N N 16.080 26.939 -11.245 -3.991 -1.142 0.565 H20 9XY 47
9XY H21 H21 H 0 1 N N N 13.608 27.127 -11.053 -4.931 -2.428 -1.377 H21 9XY 48
9XY H22 H22 H 0 1 N N N 14.294 28.491 -12.001 -3.865 -1.094 -1.880 H22 9XY 49
9XY H23 H23 H 0 1 N N N 13.472 27.134 -12.844 -3.268 -2.771 -1.912 H23 9XY 50
9XY H24 H24 H 0 1 N N N 15.646 28.595 -15.367 -0.189 -1.915 -1.952 H24 9XY 51
9XY H25 H25 H 0 1 N N N 16.268 30.963 -15.735 1.543 -3.655 -2.083 H25 9XY 52
9XY H26 H26 H 0 1 N N N 17.541 32.140 -13.907 1.801 -5.282 -0.256 H26 9XY 53
9XY H27 H27 H 0 1 N N N 18.154 30.860 -11.856 0.331 -5.180 1.714 H27 9XY 54
9XY H28 H28 H 0 1 N N N 17.205 28.650 -11.510 -1.402 -3.444 1.874 H28 9XY 55
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9XY CBC NBB SING N N 1
9XY NBB CBA SING N N 2
9XY CBA CAZ SING N N 3
9XY CAZ OAY SING N N 4
9XY OAY CAN SING N N 5
9XY CAM CAN DOUB Y N 6
9XY CAM CAL SING Y N 7
9XY CAN CAO SING Y N 8
9XY CAL CAI DOUB Y N 9
9XY CAO CAP DOUB Y N 10
9XY CAI CAP SING Y N 11
9XY CAI CAH SING N N 12
9XY CAC CAD DOUB Y N 13
9XY CAC CAB SING Y N 14
9XY OAG CAB SING N N 15
9XY CAD CAE SING Y N 16
9XY CAU CAT DOUB Y N 17
9XY CAU CAV SING Y N 18
9XY CAB CAA DOUB Y N 19
9XY CAT CAR SING Y N 20
9XY CAE CAH SING N N 21
9XY CAE CAF DOUB Y N 22
9XY CAH CAJ DOUB N Z 23
9XY CAA CAF SING Y N 24
9XY CAV CAW DOUB Y N 25
9XY CAR CAJ SING N N 26
9XY CAR CAX DOUB Y N 27
9XY CAJ CAQ SING N N 28
9XY CAW CAX SING Y N 29
9XY CAQ CAS SING N N 30
9XY CBC H1 SING N N 31
9XY CBC H2 SING N N 32
9XY CBC H3 SING N N 33
9XY NBB H4 SING N N 34
9XY CBA H6 SING N N 35
9XY CBA H7 SING N N 36
9XY CAZ H8 SING N N 37
9XY CAZ H9 SING N N 38
9XY CAM H10 SING N N 39
9XY CAL H11 SING N N 40
9XY CAO H12 SING N N 41
9XY CAP H13 SING N N 42
9XY CAD H14 SING N N 43
9XY CAC H15 SING N N 44
9XY OAG H16 SING N N 45
9XY CAA H17 SING N N 46
9XY CAF H18 SING N N 47
9XY CAQ H19 SING N N 48
9XY CAQ H20 SING N N 49
9XY CAS H21 SING N N 50
9XY CAS H22 SING N N 51
9XY CAS H23 SING N N 52
9XY CAT H24 SING N N 53
9XY CAU H25 SING N N 54
9XY CAV H26 SING N N 55
9XY CAW H27 SING N N 56
9XY CAX H28 SING N N 57
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9XY SMILES ACDLabs 12.01 "CNCCOc1ccc(cc1)\C(=C(\CC)c2ccccc2)c3ccc(cc3)O"
9XY InChI InChI 1.03 "InChI=1S/C25H27NO2/c1-3-24(19-7-5-4-6-8-19)25(20-9-13-22(27)14-10-20)21-11-15-23(16-12-21)28-18-17-26-2/h4-16,26-27H,3,17-18H2,1-2H3/b25-24-"
9XY InChIKey InChI 1.03 MHJBZVSGOZTKRH-IZHYLOQSSA-N
9XY SMILES_CANONICAL CACTVS 3.385 "CC/C(c1ccccc1)=C(c2ccc(O)cc2)/c3ccc(OCCNC)cc3"
9XY SMILES CACTVS 3.385 "CCC(c1ccccc1)=C(c2ccc(O)cc2)c3ccc(OCCNC)cc3"
9XY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC/C(=C(\c1ccc(cc1)O)/c2ccc(cc2)OCCNC)/c3ccccc3"
9XY SMILES "OpenEye OEToolkits" 2.0.6 "CCC(=C(c1ccc(cc1)O)c2ccc(cc2)OCCNC)c3ccccc3"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9XY "SYSTEMATIC NAME" ACDLabs 12.01 "4-[(1Z)-1-{4-[2-(methylamino)ethoxy]phenyl}-2-phenylbut-1-en-1-yl]phenol"
9XY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "4-[(~{Z})-1-[4-[2-(methylamino)ethoxy]phenyl]-2-phenyl-but-1-enyl]phenol"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9XY "Create component" 2017-06-26 RCSB
9XY "Initial release" 2017-10-11 RCSB
9XY "Modify synonyms" 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 9XY
_pdbx_chem_comp_synonyms.name "4-[(1Z)-1-{4-[2-(methylamino)ethoxy]phenyl}-2-phenylbut-1-en-1-yl]phenol"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
##