data_9ZG # _chem_comp.id 9ZG _chem_comp.name "(phenylmethyl) ~{N}-[(2~{S})-1-[[aminomethyl(methyl)amino]-methyl-amino]-1-oxidanylidene-3-phenyl-propan-2-yl]carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H26 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-11-22 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 370.445 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9ZG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7QBO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9ZG C4 C1 C 0 1 N N N 31.291 -4.468 7.925 -1.751 -1.753 -0.413 C4 9ZG 1 9ZG C14 C2 C 0 1 N N N 33.680 -0.714 10.683 3.355 -0.780 1.015 C14 9ZG 2 9ZG C5 C3 C 0 1 N N S 32.439 -3.769 7.221 -1.313 -0.345 -0.103 C5 9ZG 3 9ZG C6 C4 C 0 1 N N N 33.148 -4.744 6.293 -2.173 0.643 -0.895 C6 9ZG 4 9ZG C11 C5 C 0 1 Y N N 35.152 -2.424 4.086 -2.164 3.954 0.918 C11 9ZG 5 9ZG C7 C6 C 0 1 Y N N 34.291 -4.129 5.541 -1.819 2.052 -0.494 C7 9ZG 6 9ZG C8 C7 C 0 1 Y N N 35.569 -4.652 5.636 -0.825 2.733 -1.170 C8 9ZG 7 9ZG C9 C8 C 0 1 Y N N 36.632 -4.085 4.934 -0.500 4.025 -0.802 C9 9ZG 8 9ZG C10 C9 C 0 1 Y N N 36.413 -2.974 4.156 -1.169 4.636 0.242 C10 9ZG 9 9ZG C12 C10 C 0 1 Y N N 34.096 -3.011 4.757 -2.489 2.662 0.550 C12 9ZG 10 9ZG C13 C11 C 0 1 N N N 33.062 -2.084 8.851 1.067 -0.531 0.383 C13 9ZG 11 9ZG N1 N1 N 0 1 N N N 28.912 -4.871 7.971 -3.901 -1.252 0.393 N1 9ZG 12 9ZG N2 N2 N 0 1 N N N 27.729 -6.978 7.785 -5.653 0.268 -0.220 N2 9ZG 13 9ZG C3 C12 C 0 1 N N N 29.901 -3.786 6.024 -3.444 -3.504 -0.461 C3 9ZG 14 9ZG N3 N3 N 0 1 N N N 30.063 -4.427 7.323 -3.017 -2.137 -0.155 N3 9ZG 15 9ZG C1 C13 C 0 1 N N N 28.315 -4.129 9.106 -4.331 -1.693 1.726 C1 9ZG 16 9ZG C2 C14 C 0 1 N N N 28.662 -6.098 7.298 -5.056 -1.047 -0.491 C2 9ZG 17 9ZG O1 O1 O 0 1 N N N 31.465 -4.995 9.022 -0.966 -2.539 -0.899 O1 9ZG 18 9ZG N4 N4 N 0 1 N N N 33.382 -3.201 8.165 0.093 -0.177 -0.479 N4 9ZG 19 9ZG O2 O2 O 0 1 N N N 32.022 -1.456 8.735 0.779 -0.990 1.470 O2 9ZG 20 9ZG O3 O3 O 0 1 N N N 34.027 -1.776 9.737 2.359 -0.377 0.038 O3 9ZG 21 9ZG C15 C15 C 0 1 Y N N 34.538 -0.811 11.913 4.734 -0.536 0.458 C15 9ZG 22 9ZG C16 C16 C 0 1 Y N N 35.833 -1.292 11.846 5.372 -1.526 -0.266 C16 9ZG 23 9ZG C17 C17 C 0 1 Y N N 36.629 -1.376 12.982 6.636 -1.302 -0.777 C17 9ZG 24 9ZG C18 C18 C 0 1 Y N N 36.134 -0.970 14.194 7.263 -0.088 -0.565 C18 9ZG 25 9ZG C19 C19 C 0 1 Y N N 34.846 -0.496 14.276 6.624 0.902 0.158 C19 9ZG 26 9ZG C20 C20 C 0 1 Y N N 34.047 -0.415 13.143 5.358 0.680 0.666 C20 9ZG 27 9ZG H1 H1 H 0 1 N N N 33.840 0.264 10.205 3.224 -0.199 1.928 H1 9ZG 28 9ZG H2 H2 H 0 1 N N N 32.623 -0.814 10.969 3.236 -1.840 1.239 H2 9ZG 29 9ZG H3 H3 H 0 1 N N N 32.019 -2.959 6.606 -1.430 -0.154 0.963 H3 9ZG 30 9ZG H4 H4 H 0 1 N N N 32.417 -5.126 5.565 -1.989 0.511 -1.961 H4 9ZG 31 9ZG H5 H5 H 0 1 N N N 33.536 -5.579 6.895 -3.227 0.458 -0.683 H5 9ZG 32 9ZG H6 H6 H 0 1 N N N 34.988 -1.529 3.504 -2.684 4.430 1.736 H6 9ZG 33 9ZG H7 H7 H 0 1 N N N 35.746 -5.513 6.264 -0.301 2.256 -1.985 H7 9ZG 34 9ZG H8 H8 H 0 1 N N N 37.620 -4.516 5.001 0.277 4.558 -1.330 H8 9ZG 35 9ZG H9 H9 H 0 1 N N N 37.228 -2.533 3.601 -0.916 5.646 0.529 H9 9ZG 36 9ZG H10 H10 H 0 1 N N N 33.106 -2.589 4.666 -3.266 2.129 1.079 H10 9ZG 37 9ZG H11 H11 H 0 1 N N N 27.685 -7.781 7.191 -4.969 1.003 -0.319 H11 9ZG 38 9ZG H12 H12 H 0 1 N N N 27.988 -7.261 8.709 -6.451 0.433 -0.816 H12 9ZG 39 9ZG H14 H14 H 0 1 N N N 28.849 -3.855 5.709 -3.267 -4.143 0.404 H14 9ZG 40 9ZG H15 H15 H 0 1 N N N 30.192 -2.728 6.099 -4.507 -3.507 -0.704 H15 9ZG 41 9ZG H16 H16 H 0 1 N N N 30.539 -4.291 5.284 -2.876 -3.880 -1.313 H16 9ZG 42 9ZG H17 H17 H 0 1 N N N 28.870 -3.193 9.265 -3.463 -1.770 2.381 H17 9ZG 43 9ZG H18 H18 H 0 1 N N N 27.263 -3.898 8.880 -5.034 -0.970 2.139 H18 9ZG 44 9ZG H19 H19 H 0 1 N N N 28.368 -4.746 10.015 -4.814 -2.667 1.648 H19 9ZG 45 9ZG H20 H20 H 0 1 N N N 29.619 -6.640 7.263 -4.731 -1.090 -1.531 H20 9ZG 46 9ZG H21 H21 H 0 1 N N N 28.349 -5.839 6.276 -5.796 -1.826 -0.310 H21 9ZG 47 9ZG H22 H22 H 0 1 N N N 34.270 -3.638 8.308 0.323 0.190 -1.347 H22 9ZG 48 9ZG H23 H23 H 0 1 N N N 36.233 -1.608 10.894 4.883 -2.474 -0.432 H23 9ZG 49 9ZG H24 H24 H 0 1 N N N 37.636 -1.760 12.910 7.135 -2.075 -1.342 H24 9ZG 50 9ZG H25 H25 H 0 1 N N N 36.752 -1.022 15.079 8.251 0.087 -0.964 H25 9ZG 51 9ZG H26 H26 H 0 1 N N N 34.451 -0.183 15.232 7.114 1.851 0.324 H26 9ZG 52 9ZG H27 H27 H 0 1 N N N 33.037 -0.041 13.223 4.858 1.455 1.227 H27 9ZG 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9ZG C11 C10 DOUB Y N 1 9ZG C11 C12 SING Y N 2 9ZG C10 C9 SING Y N 3 9ZG C12 C7 DOUB Y N 4 9ZG C9 C8 DOUB Y N 5 9ZG C7 C8 SING Y N 6 9ZG C7 C6 SING N N 7 9ZG C3 N3 SING N N 8 9ZG C6 C5 SING N N 9 9ZG C5 C4 SING N N 10 9ZG C5 N4 SING N N 11 9ZG C2 N2 SING N N 12 9ZG C2 N1 SING N N 13 9ZG N3 C4 SING N N 14 9ZG N3 N1 SING N N 15 9ZG C4 O1 DOUB N N 16 9ZG N1 C1 SING N N 17 9ZG N4 C13 SING N N 18 9ZG O2 C13 DOUB N N 19 9ZG C13 O3 SING N N 20 9ZG O3 C14 SING N N 21 9ZG C14 C15 SING N N 22 9ZG C16 C15 DOUB Y N 23 9ZG C16 C17 SING Y N 24 9ZG C15 C20 SING Y N 25 9ZG C17 C18 DOUB Y N 26 9ZG C20 C19 DOUB Y N 27 9ZG C18 C19 SING Y N 28 9ZG C14 H1 SING N N 29 9ZG C14 H2 SING N N 30 9ZG C5 H3 SING N N 31 9ZG C6 H4 SING N N 32 9ZG C6 H5 SING N N 33 9ZG C11 H6 SING N N 34 9ZG C8 H7 SING N N 35 9ZG C9 H8 SING N N 36 9ZG C10 H9 SING N N 37 9ZG C12 H10 SING N N 38 9ZG N2 H11 SING N N 39 9ZG N2 H12 SING N N 40 9ZG C3 H14 SING N N 41 9ZG C3 H15 SING N N 42 9ZG C3 H16 SING N N 43 9ZG C1 H17 SING N N 44 9ZG C1 H18 SING N N 45 9ZG C1 H19 SING N N 46 9ZG C2 H20 SING N N 47 9ZG C2 H21 SING N N 48 9ZG N4 H22 SING N N 49 9ZG C16 H23 SING N N 50 9ZG C17 H24 SING N N 51 9ZG C18 H25 SING N N 52 9ZG C19 H26 SING N N 53 9ZG C20 H27 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9ZG InChI InChI 1.06 "InChI=1S/C20H26N4O3/c1-23(15-21)24(2)19(25)18(13-16-9-5-3-6-10-16)22-20(26)27-14-17-11-7-4-8-12-17/h3-12,18H,13-15,21H2,1-2H3,(H,22,26)/t18-/m0/s1" 9ZG InChIKey InChI 1.06 OUWJIALCFGQZPQ-SFHVURJKSA-N 9ZG SMILES_CANONICAL CACTVS 3.385 "CN(CN)N(C)C(=O)[C@H](Cc1ccccc1)NC(=O)OCc2ccccc2" 9ZG SMILES CACTVS 3.385 "CN(CN)N(C)C(=O)[CH](Cc1ccccc1)NC(=O)OCc2ccccc2" 9ZG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(CN)N(C)C(=O)[C@H](Cc1ccccc1)NC(=O)OCc2ccccc2" 9ZG SMILES "OpenEye OEToolkits" 2.0.7 "CN(CN)N(C)C(=O)C(Cc1ccccc1)NC(=O)OCc2ccccc2" # _pdbx_chem_comp_identifier.comp_id 9ZG _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(phenylmethyl) ~{N}-[(2~{S})-1-[[aminomethyl(methyl)amino]-methyl-amino]-1-oxidanylidene-3-phenyl-propan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9ZG "Create component" 2021-11-22 PDBE 9ZG "Initial release" 2022-01-26 RCSB 9ZG "Modify descriptor" 2022-08-22 RCSB #