data_A06 # _chem_comp.id A06 _chem_comp.name "(3S)-4-(5-chloro-1H-benzimidazol-2-yl)-3-(4-chlorophenyl)butanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H14 Cl2 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-09-08 _chem_comp.pdbx_modified_date 2023-09-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 349.211 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A06 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4A06 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A06 C1 C1 C 0 1 Y N N 13.840 -6.389 -14.535 2.546 -0.177 0.133 C1 A06 1 A06 C6 C6 C 0 1 Y N N 13.074 -7.034 -13.569 3.183 -0.058 1.354 C6 A06 2 A06 C5 C5 C 0 1 Y N N 13.323 -8.369 -13.268 4.540 -0.302 1.452 C5 A06 3 A06 C4 C4 C 0 1 Y N N 14.339 -9.049 -13.937 5.261 -0.665 0.329 C4 A06 4 A06 C3 C3 C 0 1 Y N N 15.102 -8.396 -14.901 4.623 -0.785 -0.893 C3 A06 5 A06 C2 C2 C 0 1 Y N N 14.854 -7.065 -15.199 3.266 -0.540 -0.990 C2 A06 6 A06 C8 C8 C 0 1 Y N N 16.328 -4.100 -11.848 -3.239 -0.817 -1.085 C8 A06 7 A06 C9 C9 C 0 1 Y N N 16.451 -3.860 -10.487 -4.481 -0.782 -1.704 C9 A06 8 A06 C10 C10 C 0 1 Y N N 17.670 -4.110 -9.864 -5.604 -0.468 -0.969 C10 A06 9 A06 C11 C11 C 0 1 Y N N 18.761 -4.595 -10.581 -5.502 -0.185 0.387 C11 A06 10 A06 C12 C12 C 0 1 Y N N 18.685 -4.844 -11.946 -4.278 -0.215 1.016 C12 A06 11 A06 C13 C13 C 0 1 Y N N 17.490 -4.608 -12.606 -3.130 -0.532 0.286 C13 A06 12 A06 N14 N14 N 0 1 Y N N 17.077 -4.739 -13.883 -1.815 -0.642 0.609 N14 A06 13 A06 C15 C15 C 0 1 Y N N 15.779 -4.349 -13.952 -1.130 -0.967 -0.448 C15 A06 14 A06 C14 C14 C 0 1 N N N 13.596 -4.972 -14.869 1.066 0.082 0.027 C14 A06 15 A06 C16 C16 C 0 1 N N N 14.944 -4.351 -15.210 0.361 -1.179 -0.478 C16 A06 16 A06 C17 C17 C 0 1 N N N ? ? ? 0.818 1.232 -0.952 C17 A06 17 A06 C18 C18 C 0 1 N N N ? ? ? 1.391 2.506 -0.386 C18 A06 18 A06 O1 O1 O 0 1 N N N ? ? ? 1.397 3.626 -1.126 O1 A06 19 A06 O2 O2 O 0 1 N N N ? ? ? 1.844 2.519 0.734 O2 A06 20 A06 CL1 CL1 CL 0 0 N N N 20.304 -4.905 -9.730 -6.928 0.210 1.294 CL1 A06 21 A06 N9 N9 N 0 1 Y N N 15.333 -3.976 -12.733 -1.957 -1.094 -1.520 N9 A06 22 A06 CL2 CL2 CL 0 0 N N N 14.676 -10.776 -13.568 6.965 -0.971 0.452 CL2 A06 23 A06 H6 H6 H 0 1 N N N 12.289 -6.500 -13.055 2.621 0.226 2.231 H6 A06 24 A06 H2 H2 H 0 1 N N N 15.447 -6.556 -15.945 2.768 -0.633 -1.944 H2 A06 25 A06 H5 H5 H 0 1 N N N 12.732 -8.876 -12.520 5.038 -0.208 2.407 H5 A06 26 A06 H3 H3 H 0 1 N N N 15.888 -8.927 -15.417 5.185 -1.068 -1.770 H3 A06 27 A06 H9 H9 H 0 1 N N N 15.613 -3.484 -9.919 -4.568 -1.001 -2.758 H9 A06 28 A06 HA HA H 0 1 N N N 14.408 -3.658 -12.526 -1.696 -1.333 -2.423 HA A06 29 A06 H10 H10 H 0 1 N N N 17.772 -3.924 -8.805 -6.570 -0.440 -1.452 H10 A06 30 A06 H12 H12 H 0 1 N N N 19.544 -5.216 -12.484 -4.206 0.006 2.071 H12 A06 31 A06 H14 H14 H 0 1 N N N 12.840 -4.823 -15.654 0.673 0.350 1.008 H14 A06 32 A06 H161 H161 H 0 0 N N N 14.802 -3.320 -15.567 0.622 -2.022 0.162 H161 A06 33 A06 H162 H162 H 0 0 N N N 15.443 -4.944 -15.990 0.678 -1.387 -1.500 H162 A06 34 A06 H171 H171 H 0 0 N N N ? ? ? 1.300 1.008 -1.904 H171 A06 35 A06 H172 H172 H 0 0 N N N ? ? ? -0.254 1.353 -1.107 H172 A06 36 A06 HO1 HO1 H 0 1 N N N ? ? ? 1.775 4.418 -0.720 HO1 A06 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A06 C1 C6 SING Y N 1 A06 C1 C2 DOUB Y N 2 A06 C1 C14 SING N N 3 A06 C6 C5 DOUB Y N 4 A06 C5 C4 SING Y N 5 A06 C4 C3 DOUB Y N 6 A06 C4 CL2 SING N N 7 A06 C3 C2 SING Y N 8 A06 C8 C9 SING Y N 9 A06 C8 C13 DOUB Y N 10 A06 C8 N9 SING Y N 11 A06 C9 C10 DOUB Y N 12 A06 C10 C11 SING Y N 13 A06 C11 C12 DOUB Y N 14 A06 C11 CL1 SING N N 15 A06 C12 C13 SING Y N 16 A06 C13 N14 SING Y N 17 A06 N14 C15 DOUB Y N 18 A06 C15 C16 SING N N 19 A06 C15 N9 SING Y N 20 A06 C14 C16 SING N N 21 A06 C14 C17 SING N N 22 A06 C17 C18 SING N N 23 A06 C18 O1 SING N N 24 A06 C18 O2 DOUB N N 25 A06 C14 H14 SING N N 26 A06 C6 H6 SING N N 27 A06 C2 H2 SING N N 28 A06 C5 H5 SING N N 29 A06 C3 H3 SING N N 30 A06 C9 H9 SING N N 31 A06 N9 HA SING N N 32 A06 C10 H10 SING N N 33 A06 C12 H12 SING N N 34 A06 C16 H161 SING N N 35 A06 C16 H162 SING N N 36 A06 C17 H171 SING N N 37 A06 C17 H172 SING N N 38 A06 O1 HO1 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A06 InChI InChI 1.06 "InChI=1S/C17H14Cl2N2O2/c18-12-3-1-10(2-4-12)11(8-17(22)23)7-16-20-14-6-5-13(19)9-15(14)21-16/h1-6,9,11H,7-8H2,(H,20,21)(H,22,23)" A06 InChIKey InChI 1.06 MOXSMEYUODNXTB-UHFFFAOYSA-N A06 SMILES_CANONICAL CACTVS 3.385 "OC(=O)CC(Cc1[nH]c2ccc(Cl)cc2n1)c3ccc(Cl)cc3" A06 SMILES CACTVS 3.385 "OC(=O)CC(Cc1[nH]c2ccc(Cl)cc2n1)c3ccc(Cl)cc3" A06 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1[C@H](Cc2[nH]c3ccc(cc3n2)Cl)CC(=O)O)Cl" A06 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(Cc2[nH]c3ccc(cc3n2)Cl)CC(=O)O)Cl" # _pdbx_chem_comp_identifier.comp_id A06 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R})-4-(5-chloranyl-1~{H}-benzimidazol-2-yl)-3-(4-chlorophenyl)butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A06 "Create component" 2011-09-08 EBI A06 "Other modification" 2011-10-04 EBI A06 "Modify descriptor" 2023-09-23 RCSB #