data_A1A00 # _chem_comp.id A1A00 _chem_comp.name "N-cyclopropyl-N'-{4-[(2-oxopyrrolidin-1-yl)amino]-9H-pyrimido[4,5-b]indol-8-yl}urea" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-02 _chem_comp.pdbx_modified_date 2025-08-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 365.389 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A00 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HC7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A00 N2 N1 N 0 1 N N N N N N 14.967 1.184 2.040 -3.271 0.643 -0.126 N2 A1A00 1 A1A00 C3 C1 C 0 1 N N N N N N 14.646 -1.734 -0.227 -6.938 1.278 -0.485 C3 A1A00 2 A1A00 C6 C2 C 0 1 Y N N N N N 14.873 -0.075 5.447 -2.589 -2.863 -0.217 C6 A1A00 3 A1A00 C9 C3 C 0 1 Y N N N N N 15.186 3.756 3.983 -0.139 0.448 -0.325 C9 A1A00 4 A1A00 C12 C4 C 0 1 Y N N N N N 15.412 6.570 4.271 2.239 1.871 -0.454 C12 A1A00 5 A1A00 C14 C5 C 0 1 N N N N N N 15.349 7.540 7.188 4.593 0.320 0.008 C14 A1A00 6 A1A00 C17 C6 C 0 1 N N N N N N 13.967 9.443 9.744 8.012 -0.813 1.102 C17 A1A00 7 A1A00 C1 C7 C 0 1 N N N N N N 13.230 -0.467 1.312 -5.355 0.352 1.085 C1 A1A00 8 A1A00 C10 C8 C 0 1 Y N N N N N 15.257 4.586 2.834 -0.154 1.843 -0.305 C10 A1A00 9 A1A00 C11 C9 C 0 1 Y N N N N N 15.372 5.978 2.976 1.030 2.544 -0.370 C11 A1A00 10 A1A00 C13 C10 C 0 1 Y N N N N N 15.355 5.794 5.448 2.271 0.488 -0.489 C13 A1A00 11 A1A00 C15 C11 C 0 1 N N N N N N 15.327 8.884 9.271 6.942 0.178 0.639 C15 A1A00 12 A1A00 C16 C12 C 0 1 N N N N N N 14.913 8.824 10.749 8.269 0.077 -0.115 C16 A1A00 13 A1A00 C18 C13 C 0 1 Y N N N N N 15.236 4.371 5.290 1.080 -0.238 -0.422 C18 A1A00 14 A1A00 C2 C14 C 0 1 N N N N N N 13.239 -1.684 0.380 -6.841 0.467 0.828 C2 A1A00 15 A1A00 C4 C15 C 0 1 N N N N N N 15.445 -0.607 0.508 -5.572 0.978 -1.141 C4 A1A00 16 A1A00 C5 C16 C 0 1 Y N N N N N 14.985 1.164 3.452 -2.586 -0.557 -0.186 C5 A1A00 17 A1A00 C7 C17 C 0 1 Y N N N N N 15.057 2.183 5.663 -0.537 -1.823 -0.336 C7 A1A00 18 A1A00 C8 C18 C 0 1 Y N N N N N 15.073 2.353 4.219 -1.188 -0.581 -0.273 C8 A1A00 19 A1A00 N1 N2 N 0 1 N N N N N N 14.512 0.155 1.323 -4.668 0.649 -0.032 N1 A1A00 20 A1A00 N3 N3 N 0 1 Y N N N N N 14.879 -0.028 4.091 -3.240 -1.716 -0.160 N3 A1A00 21 A1A00 N4 N4 N 0 1 Y N N N N N 14.950 0.968 6.301 -1.278 -2.931 -0.299 N4 A1A00 22 A1A00 N5 N5 N 0 1 N N N N N N 15.366 6.248 6.759 3.496 -0.183 -0.592 N5 A1A00 23 A1A00 N6 N6 N 0 1 N N N N N N 15.339 7.658 8.544 5.750 -0.370 -0.014 N6 A1A00 24 A1A00 N7 N7 N 0 1 Y N N N N N 15.152 3.392 6.221 0.815 -1.599 -0.418 N7 A1A00 25 A1A00 O1 O1 O 0 1 N N N N N N 12.243 -0.068 1.924 -4.855 0.039 2.145 O1 A1A00 26 A1A00 O2 O2 O 0 1 N N N N N N 15.360 8.501 6.425 4.538 1.397 0.570 O2 A1A00 27 A1A00 H7 H1 H 0 1 N N N N N N 15.913 1.330 1.750 -2.783 1.482 -0.145 H7 A1A00 28 A1A00 H3 H2 H 0 1 N N N N N N 15.109 -2.716 -0.049 -7.757 0.916 -1.107 H3 A1A00 29 A1A00 H4 H3 H 0 1 N N N N N N 14.607 -1.538 -1.309 -7.046 2.342 -0.279 H4 A1A00 30 A1A00 H8 H4 H 0 1 N N N N N N 14.798 -1.056 5.893 -3.155 -3.782 -0.189 H8 A1A00 31 A1A00 H11 H5 H 0 1 N N N N N N 15.488 7.644 4.354 3.161 2.430 -0.507 H11 A1A00 32 A1A00 H17 H6 H 0 1 N N N N N N 13.792 10.529 9.751 8.551 -0.579 2.020 H17 A1A00 33 A1A00 H18 H7 H 0 1 N N N N N N 13.036 8.923 9.474 7.829 -1.872 0.921 H18 A1A00 34 A1A00 H9 H8 H 0 1 N N N N N N 15.222 4.146 1.848 -1.093 2.372 -0.240 H9 A1A00 35 A1A00 H10 H9 H 0 1 N N N N N N 15.431 6.604 2.098 1.017 3.624 -0.354 H10 A1A00 36 A1A00 H14 H10 H 0 1 N N N N N N 16.088 9.638 9.019 6.777 1.064 1.252 H14 A1A00 37 A1A00 H16 H11 H 0 1 N N N N N N 14.666 7.856 11.210 8.978 0.897 0.002 H16 A1A00 38 A1A00 H15 H12 H 0 1 N N N N N N 15.422 9.462 11.487 8.256 -0.396 -1.097 H15 A1A00 39 A1A00 H2 H13 H 0 1 N N N N N N 12.484 -1.566 -0.411 -7.329 1.002 1.643 H2 A1A00 40 A1A00 H1 H14 H 0 1 N N N N N N 13.034 -2.603 0.948 -7.284 -0.521 0.701 H1 A1A00 41 A1A00 H5 H15 H 0 1 N N N N N N 16.218 -1.056 1.149 -5.658 0.131 -1.822 H5 A1A00 42 A1A00 H6 H16 H 0 1 N N N N N N 15.920 0.055 -0.231 -5.209 1.856 -1.675 H6 A1A00 43 A1A00 H12 H17 H 0 1 N N N N N N 15.389 5.546 7.470 3.556 -1.010 -1.096 H12 A1A00 44 A1A00 H13 H18 H 0 1 N N N N N N 15.340 6.811 9.076 5.794 -1.229 -0.462 H13 A1A00 45 A1A00 H19 H19 H 0 1 N N N N N N 15.160 3.555 7.208 1.488 -2.295 -0.476 H19 A1A00 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A00 C3 C2 SING N N 1 A1A00 C3 C4 SING N N 2 A1A00 C2 C1 SING N N 3 A1A00 C4 N1 SING N N 4 A1A00 C1 N1 SING N N 5 A1A00 C1 O1 DOUB N N 6 A1A00 N1 N2 SING N N 7 A1A00 N2 C5 SING N N 8 A1A00 C10 C11 DOUB Y N 9 A1A00 C10 C9 SING Y N 10 A1A00 C11 C12 SING Y N 11 A1A00 C5 N3 DOUB Y N 12 A1A00 C5 C8 SING Y N 13 A1A00 C9 C8 SING Y N 14 A1A00 C9 C18 DOUB Y N 15 A1A00 N3 C6 SING Y N 16 A1A00 C8 C7 DOUB Y N 17 A1A00 C12 C13 DOUB Y N 18 A1A00 C18 C13 SING Y N 19 A1A00 C18 N7 SING Y N 20 A1A00 C6 N4 DOUB Y N 21 A1A00 C13 N5 SING N N 22 A1A00 C7 N7 SING Y N 23 A1A00 C7 N4 SING Y N 24 A1A00 O2 C14 DOUB N N 25 A1A00 N5 C14 SING N N 26 A1A00 C14 N6 SING N N 27 A1A00 N6 C15 SING N N 28 A1A00 C15 C17 SING N N 29 A1A00 C15 C16 SING N N 30 A1A00 C17 C16 SING N N 31 A1A00 N2 H7 SING N N 32 A1A00 C3 H3 SING N N 33 A1A00 C3 H4 SING N N 34 A1A00 C6 H8 SING N N 35 A1A00 C12 H11 SING N N 36 A1A00 C17 H17 SING N N 37 A1A00 C17 H18 SING N N 38 A1A00 C10 H9 SING N N 39 A1A00 C11 H10 SING N N 40 A1A00 C15 H14 SING N N 41 A1A00 C16 H16 SING N N 42 A1A00 C16 H15 SING N N 43 A1A00 C2 H2 SING N N 44 A1A00 C2 H1 SING N N 45 A1A00 C4 H5 SING N N 46 A1A00 C4 H6 SING N N 47 A1A00 N5 H12 SING N N 48 A1A00 N6 H13 SING N N 49 A1A00 N7 H19 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A00 SMILES ACDLabs 12.01 "O=C(NC1CC1)Nc1cccc2c3c(ncnc3[NH]c21)NN1CCCC1=O" A1A00 InChI InChI 1.06 "InChI=1S/C18H19N7O2/c26-13-5-2-8-25(13)24-17-14-11-3-1-4-12(22-18(27)21-10-6-7-10)15(11)23-16(14)19-9-20-17/h1,3-4,9-10H,2,5-8H2,(H2,21,22,27)(H2,19,20,23,24)" A1A00 InChIKey InChI 1.06 ICIAISPSYYZBKM-UHFFFAOYSA-N A1A00 SMILES_CANONICAL CACTVS 3.385 "O=C(NC1CC1)Nc2cccc3c2[nH]c4ncnc(NN5CCCC5=O)c34" A1A00 SMILES CACTVS 3.385 "O=C(NC1CC1)Nc2cccc3c2[nH]c4ncnc(NN5CCCC5=O)c34" A1A00 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c3c([nH]c2c(c1)NC(=O)NC4CC4)ncnc3NN5CCCC5=O" A1A00 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc2c3c([nH]c2c(c1)NC(=O)NC4CC4)ncnc3NN5CCCC5=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A00 "SYSTEMATIC NAME" ACDLabs 12.01 "N-cyclopropyl-N'-{4-[(2-oxopyrrolidin-1-yl)amino]-9H-pyrimido[4,5-b]indol-8-yl}urea" A1A00 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "1-cyclopropyl-3-[4-[(2-oxidanylidenepyrrolidin-1-yl)amino]-9~{H}-pyrimido[4,5-b]indol-8-yl]urea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A00 "Create component" 2024-08-02 RCSB A1A00 "Initial release" 2025-08-20 RCSB #