data_A1A07 # _chem_comp.id A1A07 _chem_comp.name "(2R)-3-phenyl-2-{[(2S)-3-phenyl-2-{[N-(trifluoroacetyl)glycyl]amino}propyl]sulfanyl}-N-[2-(pyridin-3-yl)ethyl]propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H31 F3 N4 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-05 _chem_comp.pdbx_modified_date 2025-01-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 572.642 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A07 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9COR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A07 C13 C1 C 0 1 N N N N N N -15.377 -35.124 -8.205 -0.477 2.249 0.216 C13 A1A07 1 A1A07 C15 C2 C 0 1 N N R N N N -14.837 -32.418 -6.574 2.176 1.271 -0.041 C15 A1A07 2 A1A07 C17 C3 C 0 1 Y N N N N N -13.712 -31.349 -4.415 4.015 2.932 -0.132 C17 A1A07 3 A1A07 C20 C4 C 0 1 Y N N N N N -13.831 -30.739 -1.612 6.499 3.604 0.879 C20 A1A07 4 A1A07 C21 C5 C 0 1 Y N N N N N -14.156 -32.013 -2.085 5.353 3.953 1.571 C21 A1A07 5 A1A07 C22 C6 C 0 1 Y N N N N N -14.094 -32.314 -3.452 4.112 3.617 1.065 C22 A1A07 6 A1A07 C26 C7 C 0 1 N N N N N N -16.650 -29.698 -6.528 5.089 -1.208 -0.190 C26 A1A07 7 A1A07 C28 C8 C 0 1 Y N N N N N -18.449 -28.267 -7.879 7.205 -2.398 0.317 C28 A1A07 8 A1A07 C02 C9 C 0 1 N N N N N N -10.863 -39.112 -10.379 -6.876 -3.382 -0.114 C02 A1A07 9 A1A07 C05 C10 C 0 1 N N N N N N -11.626 -37.695 -10.537 -5.662 -2.831 0.590 C05 A1A07 10 A1A07 C08 C11 C 0 1 N N N N N N -11.921 -35.442 -11.726 -3.910 -1.156 0.838 C08 A1A07 11 A1A07 C09 C12 C 0 1 N N N N N N -13.451 -35.296 -11.262 -3.470 0.116 0.160 C09 A1A07 12 A1A07 C12 C13 C 0 1 N N S N N N -15.251 -34.262 -9.537 -1.969 2.025 -0.039 C12 A1A07 13 A1A07 C16 C14 C 0 1 N N N N N N -13.648 -31.672 -5.907 2.661 2.571 -0.686 C16 A1A07 14 A1A07 C18 C15 C 0 1 Y N N N N N -13.396 -30.079 -3.914 5.160 2.582 -0.822 C18 A1A07 15 A1A07 C19 C16 C 0 1 Y N N N N N -13.453 -29.779 -2.548 6.402 2.918 -0.317 C19 A1A07 16 A1A07 C23 C17 C 0 1 N N N N N N -16.242 -32.198 -5.866 3.075 0.136 -0.460 C23 A1A07 17 A1A07 C27 C18 C 0 1 N N N N N N -17.779 -28.573 -6.538 6.306 -1.263 0.736 C27 A1A07 18 A1A07 C29 C19 C 0 1 Y N N N N N -19.853 -28.269 -8.030 8.211 -2.189 -0.608 C29 A1A07 19 A1A07 C31 C20 C 0 1 Y N N N N N -19.821 -27.729 -10.309 8.868 -4.394 -0.489 C31 A1A07 20 A1A07 C32 C21 C 0 1 Y N N N N N -18.421 -27.701 -10.289 7.888 -4.677 0.443 C32 A1A07 21 A1A07 C33 C22 C 0 1 Y N N N N N -17.752 -27.969 -9.080 7.037 -3.663 0.858 C33 A1A07 22 A1A07 C34 C23 C 0 1 N N N N N N -16.512 -34.456 -10.512 -2.766 3.204 0.522 C34 A1A07 23 A1A07 C35 C24 C 0 1 Y N N N N N -17.769 -33.658 -10.197 -4.220 3.044 0.164 C35 A1A07 24 A1A07 C36 C25 C 0 1 Y N N N N N -18.653 -34.018 -9.156 -5.071 2.363 1.015 C36 A1A07 25 A1A07 C37 C26 C 0 1 Y N N N N N -19.814 -33.271 -8.864 -6.406 2.216 0.686 C37 A1A07 26 A1A07 C38 C27 C 0 1 Y N N N N N -20.138 -32.127 -9.604 -6.890 2.750 -0.494 C38 A1A07 27 A1A07 C39 C28 C 0 1 Y N N N N N -19.275 -31.752 -10.640 -6.039 3.431 -1.345 C39 A1A07 28 A1A07 C40 C29 C 0 1 Y N N N N N -18.119 -32.501 -10.925 -4.706 3.583 -1.013 C40 A1A07 29 A1A07 F01 F1 F 0 1 N N N N N N -10.684 -39.408 -9.100 -7.284 -4.562 0.516 F01 A1A07 30 A1A07 F03 F2 F 0 1 N N N N N N -9.626 -39.110 -10.950 -7.911 -2.442 -0.061 F03 A1A07 31 A1A07 F04 F3 F 0 1 N N N N N N -11.523 -40.130 -10.928 -6.558 -3.651 -1.449 F04 A1A07 32 A1A07 N07 N1 N 0 1 N N N N N N -11.256 -36.751 -11.548 -5.090 -1.691 0.154 N07 A1A07 33 A1A07 N11 N2 N 0 1 N N N N N N -13.853 -34.484 -10.126 -2.397 0.789 0.620 N11 A1A07 34 A1A07 N25 N3 N 0 1 N N N N N N -17.014 -30.998 -5.859 4.215 -0.105 0.217 N25 A1A07 35 A1A07 N30 N4 N 0 1 Y N N N N N -20.521 -28.013 -9.182 9.002 -3.177 -0.979 N30 A1A07 36 A1A07 O06 O1 O 0 1 N N N N N N -12.498 -37.539 -9.708 -5.200 -3.414 1.548 O06 A1A07 37 A1A07 O10 O2 O 0 1 N N N N N N -14.281 -35.906 -11.908 -4.082 0.534 -0.800 O10 A1A07 38 A1A07 O24 O3 O 0 1 N N N N N N -16.681 -33.175 -5.271 2.772 -0.560 -1.406 O24 A1A07 39 A1A07 S14 S1 S 0 1 N N N N N N -14.517 -34.291 -6.733 0.478 0.927 -0.577 S14 A1A07 40 A1A07 H1 H1 H 0 1 N N N N N N -16.443 -35.254 -7.966 -0.178 3.212 -0.198 H1 A1A07 41 A1A07 H2 H2 H 0 1 N N N N N N -14.916 -36.108 -8.374 -0.287 2.241 1.289 H2 A1A07 42 A1A07 H3 H3 H 0 1 N N N N N N -14.926 -32.062 -7.611 2.201 1.372 1.044 H3 A1A07 43 A1A07 H4 H4 H 0 1 N N N N N N -13.871 -30.507 -0.558 7.469 3.867 1.275 H4 A1A07 44 A1A07 H5 H5 H 0 1 N N N N N N -14.460 -32.778 -1.386 5.429 4.488 2.506 H5 A1A07 45 A1A07 H6 H6 H 0 1 N N N N N N -14.345 -33.312 -3.781 3.217 3.891 1.605 H6 A1A07 46 A1A07 H7 H7 H 0 1 N N N N N N -16.388 -29.920 -7.573 5.420 -1.049 -1.217 H7 A1A07 47 A1A07 H8 H8 H 0 1 N N N N N N -11.337 -34.701 -11.161 -3.103 -1.888 0.797 H8 A1A07 48 A1A07 H9 H9 H 0 1 N N N N N N -11.881 -35.200 -12.798 -4.158 -0.946 1.879 H9 A1A07 49 A1A07 H10 H10 H 0 1 N N N N N N -15.287 -33.211 -9.215 -2.146 1.944 -1.112 H10 A1A07 50 A1A07 H11 H11 H 0 1 N N N N N N -12.752 -32.291 -6.063 2.734 2.435 -1.765 H11 A1A07 51 A1A07 H12 H12 H 0 1 N N N N N N -13.530 -30.716 -6.438 1.954 3.371 -0.467 H12 A1A07 52 A1A07 H13 H13 H 0 1 N N N N N N -13.098 -29.305 -4.606 5.085 2.046 -1.757 H13 A1A07 53 A1A07 H14 H14 H 0 1 N N N N N N -13.199 -28.784 -2.213 7.297 2.645 -0.857 H14 A1A07 54 A1A07 H15 H15 H 0 1 N N N N N N -17.320 -27.641 -6.177 6.854 -0.323 0.672 H15 A1A07 55 A1A07 H16 H16 H 0 1 N N N N N N -18.567 -28.889 -5.839 5.975 -1.422 1.762 H16 A1A07 56 A1A07 H17 H17 H 0 1 N N N N N N -20.444 -28.493 -7.155 8.351 -1.205 -1.031 H17 A1A07 57 A1A07 H18 H18 H 0 1 N N N N N N -20.348 -27.523 -11.229 9.534 -5.178 -0.817 H18 A1A07 58 A1A07 H19 H19 H 0 1 N N N N N N -17.864 -27.477 -11.187 7.783 -5.675 0.841 H19 A1A07 59 A1A07 H20 H20 H 0 1 N N N N N N -16.672 -27.947 -9.065 6.262 -3.855 1.585 H20 A1A07 60 A1A07 H21 H21 H 0 1 N N N N N N -16.784 -35.522 -10.492 -2.659 3.231 1.607 H21 A1A07 61 A1A07 H22 H22 H 0 1 N N N N N N -16.190 -34.179 -11.527 -2.387 4.134 0.097 H22 A1A07 62 A1A07 H23 H23 H 0 1 N N N N N N -18.433 -34.894 -8.564 -4.693 1.946 1.936 H23 A1A07 63 A1A07 H24 H24 H 0 1 N N N N N N -20.461 -33.586 -8.059 -7.070 1.684 1.350 H24 A1A07 64 A1A07 H25 H25 H 0 1 N N N N N N -21.025 -31.553 -9.382 -7.932 2.635 -0.751 H25 A1A07 65 A1A07 H26 H26 H 0 1 N N N N N N -19.500 -30.875 -11.229 -6.417 3.847 -2.267 H26 A1A07 66 A1A07 H27 H27 H 0 1 N N N N N N -17.476 -32.179 -11.730 -4.041 4.114 -1.678 H27 A1A07 67 A1A07 H28 H28 H 0 1 N N N N N N -10.508 -36.990 -12.167 -5.460 -1.225 -0.612 H28 A1A07 68 A1A07 H29 H29 H 0 1 N N N N N N -13.111 -34.000 -9.662 -1.908 0.454 1.388 H29 A1A07 69 A1A07 H30 H30 H 0 1 N N N N N N -15.771 -29.288 -6.009 4.541 -2.148 -0.127 H30 A1A07 70 A1A07 H31 H31 H 0 1 N N N N N N -17.881 -31.022 -5.362 4.457 0.451 0.974 H31 A1A07 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A07 O10 C09 DOUB N N 1 A1A07 C08 N07 SING N N 2 A1A07 C08 C09 SING N N 3 A1A07 N07 C05 SING N N 4 A1A07 C09 N11 SING N N 5 A1A07 F03 C02 SING N N 6 A1A07 F04 C02 SING N N 7 A1A07 C40 C39 DOUB Y N 8 A1A07 C40 C35 SING Y N 9 A1A07 C39 C38 SING Y N 10 A1A07 C05 C02 SING N N 11 A1A07 C05 O06 DOUB N N 12 A1A07 C34 C35 SING N N 13 A1A07 C34 C12 SING N N 14 A1A07 C02 F01 SING N N 15 A1A07 C31 C32 DOUB Y N 16 A1A07 C31 N30 SING Y N 17 A1A07 C32 C33 SING Y N 18 A1A07 C35 C36 DOUB Y N 19 A1A07 N11 C12 SING N N 20 A1A07 C38 C37 DOUB Y N 21 A1A07 C12 C13 SING N N 22 A1A07 N30 C29 DOUB Y N 23 A1A07 C36 C37 SING Y N 24 A1A07 C33 C28 DOUB Y N 25 A1A07 C13 S14 SING N N 26 A1A07 C29 C28 SING Y N 27 A1A07 C28 C27 SING N N 28 A1A07 S14 C15 SING N N 29 A1A07 C15 C16 SING N N 30 A1A07 C15 C23 SING N N 31 A1A07 C27 C26 SING N N 32 A1A07 C26 N25 SING N N 33 A1A07 C16 C17 SING N N 34 A1A07 C23 N25 SING N N 35 A1A07 C23 O24 DOUB N N 36 A1A07 C17 C18 DOUB Y N 37 A1A07 C17 C22 SING Y N 38 A1A07 C18 C19 SING Y N 39 A1A07 C22 C21 DOUB Y N 40 A1A07 C19 C20 DOUB Y N 41 A1A07 C21 C20 SING Y N 42 A1A07 C13 H1 SING N N 43 A1A07 C13 H2 SING N N 44 A1A07 C15 H3 SING N N 45 A1A07 C20 H4 SING N N 46 A1A07 C21 H5 SING N N 47 A1A07 C22 H6 SING N N 48 A1A07 C26 H7 SING N N 49 A1A07 C08 H8 SING N N 50 A1A07 C08 H9 SING N N 51 A1A07 C12 H10 SING N N 52 A1A07 C16 H11 SING N N 53 A1A07 C16 H12 SING N N 54 A1A07 C18 H13 SING N N 55 A1A07 C19 H14 SING N N 56 A1A07 C27 H15 SING N N 57 A1A07 C27 H16 SING N N 58 A1A07 C29 H17 SING N N 59 A1A07 C31 H18 SING N N 60 A1A07 C32 H19 SING N N 61 A1A07 C33 H20 SING N N 62 A1A07 C34 H21 SING N N 63 A1A07 C34 H22 SING N N 64 A1A07 C36 H23 SING N N 65 A1A07 C37 H24 SING N N 66 A1A07 C38 H25 SING N N 67 A1A07 C39 H26 SING N N 68 A1A07 C40 H27 SING N N 69 A1A07 N07 H28 SING N N 70 A1A07 N11 H29 SING N N 71 A1A07 C26 H30 SING N N 72 A1A07 N25 H31 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A07 SMILES ACDLabs 12.01 "FC(F)(F)C(=O)NCC(=O)NC(Cc1ccccc1)CSC(Cc1ccccc1)C(=O)NCCc1cccnc1" A1A07 InChI InChI 1.06 "InChI=1S/C29H31F3N4O3S/c30-29(31,32)28(39)35-19-26(37)36-24(16-21-8-3-1-4-9-21)20-40-25(17-22-10-5-2-6-11-22)27(38)34-15-13-23-12-7-14-33-18-23/h1-12,14,18,24-25H,13,15-17,19-20H2,(H,34,38)(H,35,39)(H,36,37)/t24-,25+/m0/s1" A1A07 InChIKey InChI 1.06 GEIFBNQNQIBUCF-LOSJGSFVSA-N A1A07 SMILES_CANONICAL CACTVS 3.385 "FC(F)(F)C(=O)NCC(=O)N[C@H](CS[C@H](Cc1ccccc1)C(=O)NCCc2cccnc2)Cc3ccccc3" A1A07 SMILES CACTVS 3.385 "FC(F)(F)C(=O)NCC(=O)N[CH](CS[CH](Cc1ccccc1)C(=O)NCCc2cccnc2)Cc3ccccc3" A1A07 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C[C@@H](CS[C@H](Cc2ccccc2)C(=O)NCCc3cccnc3)NC(=O)CNC(=O)C(F)(F)F" A1A07 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC(CSC(Cc2ccccc2)C(=O)NCCc3cccnc3)NC(=O)CNC(=O)C(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A07 "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-3-phenyl-2-{[(2S)-3-phenyl-2-{[N-(trifluoroacetyl)glycyl]amino}propyl]sulfanyl}-N-[2-(pyridin-3-yl)ethyl]propanamide" A1A07 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-3-phenyl-2-[(2~{S})-3-phenyl-2-[2-[2,2,2-tris(fluoranyl)ethanoylamino]ethanoylamino]propyl]sulfanyl-~{N}-(2-pyridin-3-ylethyl)propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A07 "Create component" 2024-08-05 RCSB A1A07 "Initial release" 2025-01-08 RCSB #