data_A1A08 # _chem_comp.id A1A08 _chem_comp.name "(2R)-3-phenyl-2-{[(2S)-3-phenyl-2-(2,2,2-trifluoroacetamido)propyl]sulfanyl}-N-[3-(pyridin-3-yl)propyl]propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H30 F3 N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-05 _chem_comp.pdbx_modified_date 2025-01-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 529.617 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A08 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9COT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A08 C11 C1 C 0 1 N N R N N N -14.832 -32.749 -6.498 -0.446 0.869 0.328 C11 A1A08 1 A1A08 C12 C2 C 0 1 N N N N N N -13.495 -32.199 -5.882 -0.554 2.395 0.334 C12 A1A08 2 A1A08 C13 C3 C 0 1 Y N N N N N -13.564 -30.889 -5.077 -1.823 2.812 -0.364 C13 A1A08 3 A1A08 C16 C4 C 0 1 Y N N N N N -13.652 -28.477 -3.557 -4.150 3.577 -1.645 C16 A1A08 4 A1A08 C17 C5 C 0 1 Y N N N N N -13.173 -28.480 -4.864 -3.013 3.306 -2.382 C17 A1A08 5 A1A08 C18 C6 C 0 1 Y N N N N N -13.128 -29.666 -5.604 -1.849 2.924 -1.742 C18 A1A08 6 A1A08 C19 C7 C 0 1 N N N N N N -16.098 -31.845 -6.272 -1.557 0.284 1.162 C19 A1A08 7 A1A08 C22 C8 C 0 1 N N N N N N -18.081 -30.482 -7.307 -3.850 -0.497 1.424 C22 A1A08 8 A1A08 C23 C9 C 0 1 N N N N N N -17.913 -29.205 -6.391 -5.111 -0.635 0.569 C23 A1A08 9 A1A08 C24 C10 C 0 1 N N N N N N -18.161 -27.813 -7.042 -6.239 -1.229 1.415 C24 A1A08 10 A1A08 C25 C11 C 0 1 Y N N N N N -18.728 -27.839 -8.456 -7.481 -1.364 0.572 C25 A1A08 11 A1A08 C26 C12 C 0 1 Y N N N N N -20.114 -27.822 -8.707 -7.721 -2.524 -0.140 C26 A1A08 12 A1A08 C29 C13 C 0 1 Y N N N N N -18.480 -27.915 -10.889 -9.530 -0.498 -0.282 C29 A1A08 13 A1A08 C30 C14 C 0 1 Y N N N N N -17.926 -27.886 -9.605 -8.401 -0.329 0.506 C30 A1A08 14 A1A08 C31 C15 C 0 1 N N N N N N -18.230 -34.975 -8.582 4.760 1.306 -0.726 C31 A1A08 15 A1A08 C32 C16 C 0 1 Y N N N N N -18.521 -33.707 -9.406 6.158 1.171 -0.180 C32 A1A08 16 A1A08 C33 C17 C 0 1 Y N N N N N -19.720 -32.991 -9.270 6.906 0.045 -0.465 C33 A1A08 17 A1A08 C34 C18 C 0 1 Y N N N N N -19.989 -31.840 -10.021 8.188 -0.079 0.036 C34 A1A08 18 A1A08 C35 C19 C 0 1 Y N N N N N -19.060 -31.361 -10.939 8.722 0.924 0.823 C35 A1A08 19 A1A08 C36 C20 C 0 1 Y N N N N N -17.862 -32.052 -11.093 7.974 2.051 1.109 C36 A1A08 20 A1A08 C02 C21 C 0 1 N N N N N N -14.400 -37.427 -10.350 4.129 -3.008 -0.585 C02 A1A08 21 A1A08 C05 C22 C 0 1 N N N N N N -15.038 -36.198 -9.650 3.888 -1.525 -0.703 C05 A1A08 22 A1A08 C08 C23 C 0 1 N N S N N N -16.732 -35.188 -8.088 3.763 0.706 0.268 C08 A1A08 23 A1A08 C09 C24 C 0 1 N N N N N N -16.640 -35.372 -6.529 2.337 0.953 -0.227 C09 A1A08 24 A1A08 C14 C25 C 0 1 Y N N N N N -14.027 -30.865 -3.752 -2.962 3.077 0.372 C14 A1A08 25 A1A08 C15 C26 C 0 1 Y N N N N N -14.079 -29.682 -3.006 -4.126 3.459 -0.268 C15 A1A08 26 A1A08 C28 C27 C 0 1 Y N N N N N -19.873 -27.891 -11.017 -9.699 -1.685 -0.969 C28 A1A08 27 A1A08 C37 C28 C 0 1 Y N N N N N -17.601 -33.204 -10.338 6.694 2.177 0.602 C37 A1A08 28 A1A08 F01 F1 F 0 1 N N N N N N -14.419 -37.325 -11.729 5.433 -3.234 -0.132 F01 A1A08 29 A1A08 F03 F2 F 0 1 N N N N N N -13.079 -37.600 -10.091 3.218 -3.557 0.325 F03 A1A08 30 A1A08 F04 F3 F 0 1 N N N N N N -14.961 -38.633 -10.114 3.958 -3.610 -1.836 F04 A1A08 31 A1A08 N07 N1 N 0 1 N N N N N N -16.104 -36.358 -8.792 3.997 -0.736 0.384 N07 A1A08 32 A1A08 N21 N2 N 0 1 N N N N N N -16.838 -31.334 -7.388 -2.770 0.072 0.614 N21 A1A08 33 A1A08 N27 N3 N 0 1 Y N N N N N -20.685 -27.846 -9.934 -8.806 -2.650 -0.879 N27 A1A08 34 A1A08 O06 O1 O 0 1 N N N N N N -14.519 -35.131 -9.931 3.597 -1.042 -1.777 O06 A1A08 35 A1A08 O20 O2 O 0 1 N N N N N N -16.500 -31.615 -5.139 -1.360 0.005 2.325 O20 A1A08 36 A1A08 S10 S1 S 0 1 N N N N N N -15.135 -34.508 -5.799 1.155 0.374 1.022 S10 A1A08 37 A1A08 H1 H1 H 0 1 N N N N N N -14.689 -32.889 -7.580 -0.528 0.503 -0.695 H1 A1A08 38 A1A08 H2 H2 H 0 1 N N N N N N -13.098 -32.976 -5.212 -0.571 2.755 1.363 H2 A1A08 39 A1A08 H3 H3 H 0 1 N N N N N N -12.792 -32.037 -6.713 0.304 2.822 -0.186 H3 A1A08 40 A1A08 H4 H4 H 0 1 N N N N N N -13.691 -27.562 -2.984 -5.060 3.875 -2.146 H4 A1A08 41 A1A08 H5 H5 H 0 1 N N N N N N -12.833 -27.558 -5.311 -3.032 3.398 -3.458 H5 A1A08 42 A1A08 H6 H6 H 0 1 N N N N N N -12.745 -29.638 -6.613 -0.960 2.713 -2.318 H6 A1A08 43 A1A08 H7 H7 H 0 1 N N N N N N -18.342 -30.150 -8.323 -4.055 0.159 2.270 H7 A1A08 44 A1A08 H8 H8 H 0 1 N N N N N N -18.898 -31.096 -6.901 -3.551 -1.479 1.791 H8 A1A08 45 A1A08 H9 H9 H 0 1 N N N N N N -18.618 -29.306 -5.553 -5.411 0.347 0.202 H9 A1A08 46 A1A08 H10 H10 H 0 1 N N N N N N -17.201 -27.278 -7.072 -5.940 -2.211 1.781 H10 A1A08 47 A1A08 H11 H11 H 0 1 N N N N N N -20.773 -27.787 -7.852 -7.011 -3.337 -0.091 H11 A1A08 48 A1A08 H12 H12 H 0 1 N N N N N N -17.846 -27.955 -11.763 -10.267 0.287 -0.356 H12 A1A08 49 A1A08 H13 H13 H 0 1 N N N N N N -16.852 -27.900 -9.496 -8.242 0.587 1.055 H13 A1A08 50 A1A08 H14 H14 H 0 1 N N N N N N -18.873 -34.946 -7.690 4.529 2.361 -0.879 H14 A1A08 51 A1A08 H15 H15 H 0 1 N N N N N N -18.502 -35.843 -9.201 4.688 0.777 -1.676 H15 A1A08 52 A1A08 H16 H16 H 0 1 N N N N N N -20.459 -33.339 -8.563 6.488 -0.739 -1.080 H16 A1A08 53 A1A08 H17 H17 H 0 1 N N N N N N -20.926 -31.320 -9.886 8.772 -0.960 -0.187 H17 A1A08 54 A1A08 H18 H18 H 0 1 N N N N N N -19.264 -30.473 -11.519 9.724 0.827 1.215 H18 A1A08 55 A1A08 H19 H19 H 0 1 N N N N N N -17.127 -31.698 -11.800 8.391 2.834 1.724 H19 A1A08 56 A1A08 H20 H20 H 0 1 N N N N N N -16.168 -34.281 -8.350 3.896 1.175 1.243 H20 A1A08 57 A1A08 H21 H21 H 0 1 N N N N N N -17.547 -34.953 -6.069 2.191 2.020 -0.397 H21 A1A08 58 A1A08 H22 H22 H 0 1 N N N N N N -16.576 -36.446 -6.302 2.177 0.411 -1.158 H22 A1A08 59 A1A08 H23 H23 H 0 1 N N N N N N -14.353 -31.787 -3.294 -2.943 2.985 1.448 H23 A1A08 60 A1A08 H24 H24 H 0 1 N N N N N N -14.454 -29.704 -1.993 -5.015 3.671 0.308 H24 A1A08 61 A1A08 H25 H25 H 0 1 N N N N N N -20.312 -27.909 -12.004 -10.576 -1.824 -1.584 H25 A1A08 62 A1A08 H26 H26 H 0 1 N N N N N N -16.663 -33.720 -10.478 6.110 3.058 0.825 H26 A1A08 63 A1A08 H27 H27 H 0 1 N N N N N N -16.469 -37.275 -8.634 4.231 -1.122 1.242 H27 A1A08 64 A1A08 H28 H28 H 0 1 N N N N N N -16.501 -31.562 -8.301 -2.928 0.295 -0.317 H28 A1A08 65 A1A08 H29 H29 H 0 1 N N N N N N -16.883 -29.209 -6.006 -4.907 -1.291 -0.277 H29 A1A08 66 A1A08 H30 H30 H 0 1 N N N N N N -18.868 -27.262 -6.404 -6.444 -0.572 2.260 H30 A1A08 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A08 F01 C02 SING N N 1 A1A08 C36 C35 DOUB Y N 2 A1A08 C36 C37 SING Y N 3 A1A08 C28 C29 DOUB Y N 4 A1A08 C28 N27 SING Y N 5 A1A08 C35 C34 SING Y N 6 A1A08 C29 C30 SING Y N 7 A1A08 C02 F04 SING N N 8 A1A08 C02 F03 SING N N 9 A1A08 C02 C05 SING N N 10 A1A08 C37 C32 DOUB Y N 11 A1A08 C34 C33 DOUB Y N 12 A1A08 N27 C26 DOUB Y N 13 A1A08 O06 C05 DOUB N N 14 A1A08 C05 N07 SING N N 15 A1A08 C30 C25 DOUB Y N 16 A1A08 C32 C33 SING Y N 17 A1A08 C32 C31 SING N N 18 A1A08 N07 C08 SING N N 19 A1A08 C26 C25 SING Y N 20 A1A08 C31 C08 SING N N 21 A1A08 C25 C24 SING N N 22 A1A08 C08 C09 SING N N 23 A1A08 N21 C22 SING N N 24 A1A08 N21 C19 SING N N 25 A1A08 C22 C23 SING N N 26 A1A08 C24 C23 SING N N 27 A1A08 C09 S10 SING N N 28 A1A08 C11 C19 SING N N 29 A1A08 C11 C12 SING N N 30 A1A08 C11 S10 SING N N 31 A1A08 C19 O20 DOUB N N 32 A1A08 C12 C13 SING N N 33 A1A08 C18 C13 DOUB Y N 34 A1A08 C18 C17 SING Y N 35 A1A08 C13 C14 SING Y N 36 A1A08 C17 C16 DOUB Y N 37 A1A08 C14 C15 DOUB Y N 38 A1A08 C16 C15 SING Y N 39 A1A08 C11 H1 SING N N 40 A1A08 C12 H2 SING N N 41 A1A08 C12 H3 SING N N 42 A1A08 C16 H4 SING N N 43 A1A08 C17 H5 SING N N 44 A1A08 C18 H6 SING N N 45 A1A08 C22 H7 SING N N 46 A1A08 C22 H8 SING N N 47 A1A08 C23 H9 SING N N 48 A1A08 C24 H10 SING N N 49 A1A08 C26 H11 SING N N 50 A1A08 C29 H12 SING N N 51 A1A08 C30 H13 SING N N 52 A1A08 C31 H14 SING N N 53 A1A08 C31 H15 SING N N 54 A1A08 C33 H16 SING N N 55 A1A08 C34 H17 SING N N 56 A1A08 C35 H18 SING N N 57 A1A08 C36 H19 SING N N 58 A1A08 C08 H20 SING N N 59 A1A08 C09 H21 SING N N 60 A1A08 C09 H22 SING N N 61 A1A08 C14 H23 SING N N 62 A1A08 C15 H24 SING N N 63 A1A08 C28 H25 SING N N 64 A1A08 C37 H26 SING N N 65 A1A08 N07 H27 SING N N 66 A1A08 N21 H28 SING N N 67 A1A08 C23 H29 SING N N 68 A1A08 C24 H30 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A08 SMILES ACDLabs 12.01 "FC(F)(F)C(=O)NC(Cc1ccccc1)CSC(Cc1ccccc1)C(=O)NCCCc1cccnc1" A1A08 InChI InChI 1.06 "InChI=1S/C28H30F3N3O2S/c29-28(30,31)27(36)34-24(17-21-9-3-1-4-10-21)20-37-25(18-22-11-5-2-6-12-22)26(35)33-16-8-14-23-13-7-15-32-19-23/h1-7,9-13,15,19,24-25H,8,14,16-18,20H2,(H,33,35)(H,34,36)/t24-,25+/m0/s1" A1A08 InChIKey InChI 1.06 XEMIEHOJAVNCBX-LOSJGSFVSA-N A1A08 SMILES_CANONICAL CACTVS 3.385 "FC(F)(F)C(=O)N[C@H](CS[C@H](Cc1ccccc1)C(=O)NCCCc2cccnc2)Cc3ccccc3" A1A08 SMILES CACTVS 3.385 "FC(F)(F)C(=O)N[CH](CS[CH](Cc1ccccc1)C(=O)NCCCc2cccnc2)Cc3ccccc3" A1A08 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C[C@@H](CS[C@H](Cc2ccccc2)C(=O)NCCCc3cccnc3)NC(=O)C(F)(F)F" A1A08 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC(CSC(Cc2ccccc2)C(=O)NCCCc3cccnc3)NC(=O)C(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A08 "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-3-phenyl-2-{[(2S)-3-phenyl-2-(2,2,2-trifluoroacetamido)propyl]sulfanyl}-N-[3-(pyridin-3-yl)propyl]propanamide" A1A08 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-3-phenyl-2-[(2~{S})-3-phenyl-2-[2,2,2-tris(fluoranyl)ethanoylamino]propyl]sulfanyl-~{N}-(3-pyridin-3-ylpropyl)propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A08 "Create component" 2024-08-05 RCSB A1A08 "Initial release" 2025-01-08 RCSB #