data_A1A0S # _chem_comp.id A1A0S _chem_comp.name "(E)-1-[(3R)-1-cyclopentylpiperidin-3-yl]-N-methoxy-1-(6-methoxynaphthalen-2-yl)methanimine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H30 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-02 _chem_comp.pdbx_modified_date 2025-04-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 366.497 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A0S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9CYC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A0S N N1 N 0 1 N N N N N N -7.022 -12.530 41.722 -3.450 0.508 -0.457 N A1A0S 1 A1A0S C C1 C 0 1 N N N N N N -12.550 -4.144 47.245 7.707 1.438 0.558 C A1A0S 2 A1A0S O O1 O 0 1 N N N N N N -13.118 -5.239 46.500 6.475 2.005 0.108 O A1A0S 3 A1A0S C1 C2 C 0 1 Y N N N N N -12.287 -6.292 46.197 5.378 1.204 0.143 C1 A1A0S 4 A1A0S C10 C3 C 0 1 N N N N N N -5.717 -12.811 41.000 -4.027 1.573 0.375 C10 A1A0S 5 A1A0S C11 C4 C 0 1 N N N N N N -4.924 -11.544 40.673 -4.333 1.044 1.792 C11 A1A0S 6 A1A0S C12 C5 C 0 1 N N N N N N -4.110 -11.890 39.435 -5.650 1.706 2.233 C12 A1A0S 7 A1A0S C13 C6 C 0 1 N N N N N N -4.619 -13.218 38.911 -6.099 2.613 1.069 C13 A1A0S 8 A1A0S C14 C7 C 0 1 N N N N N N -5.904 -13.498 39.647 -5.409 2.002 -0.176 C14 A1A0S 9 A1A0S C15 C8 C 0 1 N N N N N N -7.847 -13.779 41.874 -3.264 0.964 -1.840 C15 A1A0S 10 A1A0S C16 C9 C 0 1 N N N N N N -9.170 -13.479 42.538 -2.800 -0.208 -2.707 C16 A1A0S 11 A1A0S C17 C10 C 0 1 N N N N N N -8.961 -12.850 43.910 -1.484 -0.758 -2.151 C17 A1A0S 12 A1A0S C18 C11 C 0 1 N N N N N N -5.649 -13.003 46.899 -1.202 -4.992 0.963 C18 A1A0S 13 A1A0S C19 C12 C 0 1 Y N N N N N -9.971 -9.608 45.040 2.029 -1.295 0.268 C19 A1A0S 14 A1A0S C2 C13 C 0 1 Y N N N N N -11.011 -6.423 46.678 4.163 1.695 -0.278 C2 A1A0S 15 A1A0S C20 C14 C 0 1 Y N N N N N -10.765 -8.499 45.423 3.158 -0.465 0.230 C20 A1A0S 16 A1A0S C21 C15 C 0 1 Y N N N N N -12.088 -8.323 44.956 4.417 -0.936 0.648 C21 A1A0S 17 A1A0S C22 C16 C 0 1 Y N N N N N -12.825 -7.243 45.338 5.497 -0.112 0.602 C22 A1A0S 18 A1A0S C3 C17 C 0 1 Y N N N N N -10.216 -7.533 46.298 3.031 0.867 -0.241 C3 A1A0S 19 A1A0S C4 C18 C 0 1 Y N N N N N -8.890 -7.710 46.749 1.775 1.339 -0.666 C4 A1A0S 20 A1A0S C5 C19 C 0 1 Y N N N N N -8.146 -8.787 46.358 0.692 0.521 -0.622 C5 A1A0S 21 A1A0S C6 C20 C 0 1 Y N N N N N -8.686 -9.750 45.506 0.805 -0.801 -0.156 C6 A1A0S 22 A1A0S C7 C21 C 0 1 N N N N N N -7.901 -10.952 45.145 -0.387 -1.669 -0.120 C7 A1A0S 23 A1A0S C8 C22 C 0 1 N N R N N N -8.093 -11.592 43.797 -1.692 -1.181 -0.694 C8 A1A0S 24 A1A0S C9 C23 C 0 1 N N N N N N -6.790 -11.916 43.083 -2.189 0.019 0.115 C9 A1A0S 25 A1A0S N1 N2 N 0 1 N N N N N N -7.119 -11.384 46.119 -0.312 -2.850 0.405 N1 A1A0S 26 A1A0S O1 O2 O 0 1 N N N N N N -6.487 -12.597 45.797 -1.425 -3.723 0.345 O1 A1A0S 27 A1A0S H2 H2 H 0 1 N N N N N N -13.320 -3.378 47.416 7.605 1.127 1.598 H2 A1A0S 28 A1A0S H1 H3 H 0 1 N N N N N N -12.179 -4.513 48.213 7.956 0.574 -0.058 H1 A1A0S 29 A1A0S H3 H4 H 0 1 N N N N N N -11.717 -3.706 46.675 8.500 2.182 0.478 H3 A1A0S 30 A1A0S H10 H5 H 0 1 N N N N N N -5.095 -13.457 41.637 -3.351 2.426 0.424 H10 A1A0S 31 A1A0S H12 H6 H 0 1 N N N N N N -5.605 -10.706 40.465 -4.448 -0.039 1.770 H12 A1A0S 32 A1A0S H11 H7 H 0 1 N N N N N N -4.260 -11.278 41.509 -3.530 1.321 2.475 H11 A1A0S 33 A1A0S H13 H8 H 0 1 N N N N N N -4.240 -11.110 38.670 -6.405 0.943 2.424 H13 A1A0S 34 A1A0S H14 H9 H 0 1 N N N N N N -3.045 -11.973 39.697 -5.487 2.303 3.130 H14 A1A0S 35 A1A0S H16 H10 H 0 1 N N N N N N -4.806 -13.154 37.829 -7.183 2.582 0.957 H16 A1A0S 36 A1A0S H15 H11 H 0 1 N N N N N N -3.885 -14.013 39.110 -5.760 3.636 1.230 H15 A1A0S 37 A1A0S H17 H12 H 0 1 N N N N N N -6.763 -13.072 39.108 -5.296 2.750 -0.961 H17 A1A0S 38 A1A0S H18 H13 H 0 1 N N N N N N -6.052 -14.580 39.776 -5.965 1.139 -0.541 H18 A1A0S 39 A1A0S H19 H14 H 0 1 N N N N N N -8.034 -14.210 40.879 -4.208 1.349 -2.225 H19 A1A0S 40 A1A0S H20 H15 H 0 1 N N N N N N -7.292 -14.503 42.489 -2.513 1.754 -1.865 H20 A1A0S 41 A1A0S H21 H16 H 0 1 N N N N N N -9.740 -12.782 41.906 -3.557 -0.992 -2.694 H21 A1A0S 42 A1A0S H22 H17 H 0 1 N N N N N N -9.735 -14.416 42.654 -2.647 0.134 -3.731 H22 A1A0S 43 A1A0S H24 H18 H 0 1 N N N N N N -9.938 -12.579 44.336 -1.172 -1.621 -2.739 H24 A1A0S 44 A1A0S H23 H19 H 0 1 N N N N N N -8.462 -13.576 44.569 -0.716 0.014 -2.200 H23 A1A0S 45 A1A0S H27 H20 H 0 1 N N N N N N -5.152 -13.953 46.652 -0.371 -5.496 0.470 H27 A1A0S 46 A1A0S H26 H21 H 0 1 N N N N N N -4.890 -12.230 47.086 -0.964 -4.846 2.017 H26 A1A0S 47 A1A0S H25 H22 H 0 1 N N N N N N -6.267 -13.136 47.799 -2.101 -5.602 0.875 H25 A1A0S 48 A1A0S H28 H23 H 0 1 N N N N N N -10.381 -10.352 44.373 2.111 -2.311 0.625 H28 A1A0S 49 A1A0S H4 H24 H 0 1 N N N N N N -10.610 -5.678 47.349 4.082 2.711 -0.635 H4 A1A0S 50 A1A0S H29 H25 H 0 1 N N N N N N -12.520 -9.054 44.288 4.525 -1.949 1.005 H29 A1A0S 51 A1A0S H30 H26 H 0 1 N N N N N N -13.834 -7.125 44.971 6.461 -0.479 0.923 H30 A1A0S 52 A1A0S H5 H27 H 0 1 N N N N N N -8.455 -6.980 47.416 1.672 2.352 -1.026 H5 A1A0S 53 A1A0S H6 H28 H 0 1 N N N N N N -7.131 -8.894 46.712 -0.269 0.891 -0.949 H6 A1A0S 54 A1A0S H7 H29 H 0 1 N N N N N N -8.641 -10.876 43.167 -2.431 -1.981 -0.649 H7 A1A0S 55 A1A0S H9 H30 H 0 1 N N N N N N -6.214 -10.987 42.959 -1.442 0.813 0.081 H9 A1A0S 56 A1A0S H8 H31 H 0 1 N N N N N N -6.216 -12.625 43.698 -2.352 -0.282 1.150 H8 A1A0S 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A0S C O SING N N 1 A1A0S O C1 SING N N 2 A1A0S C1 C2 DOUB Y N 3 A1A0S C2 C3 SING Y N 4 A1A0S C3 C4 DOUB Y N 5 A1A0S C4 C5 SING Y N 6 A1A0S C5 C6 DOUB Y N 7 A1A0S C6 C7 SING N N 8 A1A0S C8 C7 SING N N 9 A1A0S C8 C9 SING N N 10 A1A0S C9 N SING N N 11 A1A0S C10 N SING N N 12 A1A0S C10 C11 SING N N 13 A1A0S C11 C12 SING N N 14 A1A0S C12 C13 SING N N 15 A1A0S C13 C14 SING N N 16 A1A0S C14 C10 SING N N 17 A1A0S N C15 SING N N 18 A1A0S C15 C16 SING N N 19 A1A0S C16 C17 SING N N 20 A1A0S C17 C8 SING N N 21 A1A0S C7 N1 DOUB N E 22 A1A0S N1 O1 SING N N 23 A1A0S O1 C18 SING N N 24 A1A0S C19 C6 SING Y N 25 A1A0S C20 C19 DOUB Y N 26 A1A0S C3 C20 SING Y N 27 A1A0S C21 C20 SING Y N 28 A1A0S C22 C21 DOUB Y N 29 A1A0S C1 C22 SING Y N 30 A1A0S C H2 SING N N 31 A1A0S C H1 SING N N 32 A1A0S C H3 SING N N 33 A1A0S C10 H10 SING N N 34 A1A0S C11 H12 SING N N 35 A1A0S C11 H11 SING N N 36 A1A0S C12 H13 SING N N 37 A1A0S C12 H14 SING N N 38 A1A0S C13 H16 SING N N 39 A1A0S C13 H15 SING N N 40 A1A0S C14 H17 SING N N 41 A1A0S C14 H18 SING N N 42 A1A0S C15 H19 SING N N 43 A1A0S C15 H20 SING N N 44 A1A0S C16 H21 SING N N 45 A1A0S C16 H22 SING N N 46 A1A0S C17 H24 SING N N 47 A1A0S C17 H23 SING N N 48 A1A0S C18 H27 SING N N 49 A1A0S C18 H26 SING N N 50 A1A0S C18 H25 SING N N 51 A1A0S C19 H28 SING N N 52 A1A0S C2 H4 SING N N 53 A1A0S C21 H29 SING N N 54 A1A0S C22 H30 SING N N 55 A1A0S C4 H5 SING N N 56 A1A0S C5 H6 SING N N 57 A1A0S C8 H7 SING N N 58 A1A0S C9 H9 SING N N 59 A1A0S C9 H8 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A0S SMILES ACDLabs 12.01 "COc1ccc2cc(ccc2c1)C(=N\OC)\C1CCCN(C1)C1CCCC1" A1A0S InChI InChI 1.06 "InChI=1S/C23H30N2O2/c1-26-22-12-11-17-14-19(10-9-18(17)15-22)23(24-27-2)20-6-5-13-25(16-20)21-7-3-4-8-21/h9-12,14-15,20-21H,3-8,13,16H2,1-2H3/b24-23-/t20-/m1/s1" A1A0S InChIKey InChI 1.06 OOQFGLNLHKAAOI-LRVSTDGRSA-N A1A0S SMILES_CANONICAL CACTVS 3.385 "CO/N=C([C@@H]1CCCN(C1)C2CCCC2)/c3ccc4cc(OC)ccc4c3" A1A0S SMILES CACTVS 3.385 "CON=C([CH]1CCCN(C1)C2CCCC2)c3ccc4cc(OC)ccc4c3" A1A0S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc2cc(ccc2c1)/C(=N/OC)/[C@@H]3CCCN(C3)C4CCCC4" A1A0S SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc2cc(ccc2c1)C(=NOC)C3CCCN(C3)C4CCCC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A0S "SYSTEMATIC NAME" ACDLabs 12.01 "(E)-1-[(3R)-1-cyclopentylpiperidin-3-yl]-N-methoxy-1-(6-methoxynaphthalen-2-yl)methanimine" A1A0S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(~{E})-1-[(3~{R})-1-cyclopentylpiperidin-3-yl]-~{N}-methoxy-1-(6-methoxynaphthalen-2-yl)methanimine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A0S "Create component" 2024-08-02 RCSB A1A0S "Initial release" 2025-04-09 RCSB #