data_A1A1P # _chem_comp.id A1A1P _chem_comp.name "(12'R)-4'-chloro-9'-(piperidin-4-yl)-5'H-spiro[cyclohexane-1,7'-indolo[1,2-a]quinazolin]-5'-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H26 Cl N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-12 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 419.946 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A1P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A1P C2 C1 C 0 1 Y N N N N N ? ? ? -0.186 -0.428 0.005 C2 A1A1P 1 A1A1P C1 C2 C 0 1 N N N N N N ? ? ? 1.446 1.160 0.005 C1 A1A1P 2 A1A1P N2 N1 N 0 1 N N N N N N ? ? ? -6.928 -2.004 0.006 N2 A1A1P 3 A1A1P C5 C3 C 0 1 Y N N N N N ? ? ? -2.963 -0.467 -0.006 C5 A1A1P 4 A1A1P N1 N2 N 0 1 N N N N N N ? ? ? 1.192 -0.165 0.004 N1 A1A1P 5 A1A1P C4 C4 C 0 1 Y N N N N N ? ? ? -2.253 -1.654 0.005 C4 A1A1P 6 A1A1P C3 C5 C 0 1 Y N N N N N ? ? ? -0.873 -1.640 0.004 C3 A1A1P 7 A1A1P CL CL1 CL 0 0 N N N N N N ? ? ? 6.270 -0.861 -0.002 CL A1A1P 8 A1A1P C21 C6 C 0 1 Y N N N N N ? ? ? 4.642 -1.462 -0.001 C21 A1A1P 9 A1A1P C20 C7 C 0 1 Y N N N N N ? ? ? 3.564 -0.577 0.002 C20 A1A1P 10 A1A1P C C8 C 0 1 N N N N N N ? ? ? 3.753 0.884 0.003 C A1A1P 11 A1A1P O O1 O 0 1 N N N N N N ? ? ? 4.869 1.374 0.004 O A1A1P 12 A1A1P C22 C9 C 0 1 Y N N N N N ? ? ? 4.401 -2.821 -0.003 C22 A1A1P 13 A1A1P C23 C10 C 0 1 Y N N N N N ? ? ? 3.100 -3.304 -0.003 C23 A1A1P 14 A1A1P C24 C11 C 0 1 Y N N N N N ? ? ? 2.026 -2.439 -0.000 C24 A1A1P 15 A1A1P C19 C12 C 0 1 Y N N N N N ? ? ? 2.248 -1.068 0.002 C19 A1A1P 16 A1A1P C12 C13 C 0 1 Y N N N N N ? ? ? -0.910 0.756 -0.000 C12 A1A1P 17 A1A1P C13 C14 C 0 1 N N N N N N ? ? ? 0.107 1.867 0.001 C13 A1A1P 18 A1A1P C18 C15 C 0 1 N N N N N N ? ? ? -0.031 2.723 -1.255 C18 A1A1P 19 A1A1P C17 C16 C 0 1 N N N N N N ? ? ? -1.397 3.414 -1.254 C17 A1A1P 20 A1A1P C16 C17 C 0 1 N N N N N N ? ? ? -1.525 4.289 -0.006 C16 A1A1P 21 A1A1P C15 C18 C 0 1 N N N N N N ? ? ? -1.404 3.417 1.245 C15 A1A1P 22 A1A1P C14 C19 C 0 1 N N N N N N ? ? ? -0.038 2.725 1.254 C14 A1A1P 23 A1A1P N N3 N 0 1 N N N N N N ? ? ? 2.655 1.659 0.005 N A1A1P 24 A1A1P C11 C20 C 0 1 Y N N N N N ? ? ? -2.287 0.740 -0.006 C11 A1A1P 25 A1A1P C6 C21 C 0 1 N N N N N N ? ? ? -4.470 -0.489 -0.005 C6 A1A1P 26 A1A1P C10 C22 C 0 1 N N N N N N ? ? ? -4.970 -1.214 1.248 C10 A1A1P 27 A1A1P C9 C23 C 0 1 N N N N N N ? ? ? -6.498 -1.286 1.212 C9 A1A1P 28 A1A1P C8 C24 C 0 1 N N N N N N ? ? ? -6.499 -1.302 -1.211 C8 A1A1P 29 A1A1P C7 C25 C 0 1 N N N N N N ? ? ? -4.971 -1.230 -1.248 C7 A1A1P 30 A1A1P H2 H2 H 0 1 N N N N N N ? ? ? -7.927 -2.149 0.007 H2 A1A1P 31 A1A1P H4 H4 H 0 1 N N N N N N ? ? ? -2.781 -2.596 0.014 H4 A1A1P 32 A1A1P H5 H5 H 0 1 N N N N N N ? ? ? -0.324 -2.571 0.003 H5 A1A1P 33 A1A1P H6 H6 H 0 1 N N N N N N ? ? ? 5.230 -3.513 -0.005 H6 A1A1P 34 A1A1P H7 H7 H 0 1 N N N N N N ? ? ? 2.927 -4.370 -0.004 H7 A1A1P 35 A1A1P H8 H8 H 0 1 N N N N N N ? ? ? 1.018 -2.825 -0.001 H8 A1A1P 36 A1A1P H9 H9 H 0 1 N N N N N N ? ? ? 0.757 3.476 -1.269 H9 A1A1P 37 A1A1P H10 H10 H 0 1 N N N N N N ? ? ? 0.055 2.090 -2.137 H10 A1A1P 38 A1A1P H11 H11 H 0 1 N N N N N N ? ? ? -1.490 4.036 -2.145 H11 A1A1P 39 A1A1P H12 H12 H 0 1 N N N N N N ? ? ? -2.185 2.661 -1.253 H12 A1A1P 40 A1A1P H13 H13 H 0 1 N N N N N N ? ? ? -0.732 5.038 -0.004 H13 A1A1P 41 A1A1P H14 H14 H 0 1 N N N N N N ? ? ? -2.494 4.787 -0.009 H14 A1A1P 42 A1A1P H15 H15 H 0 1 N N N N N N ? ? ? -1.501 4.040 2.134 H15 A1A1P 43 A1A1P H16 H16 H 0 1 N N N N N N ? ? ? -2.192 2.664 1.241 H16 A1A1P 44 A1A1P H17 H17 H 0 1 N N N N N N ? ? ? 0.044 2.093 2.138 H17 A1A1P 45 A1A1P H18 H18 H 0 1 N N N N N N ? ? ? 0.750 3.478 1.271 H18 A1A1P 46 A1A1P H20 H20 H 0 1 N N N N N N ? ? ? -2.838 1.669 -0.010 H20 A1A1P 47 A1A1P H21 H21 H 0 1 N N N N N N ? ? ? -4.849 0.532 -0.012 H21 A1A1P 48 A1A1P H22 H22 H 0 1 N N N N N N ? ? ? -4.558 -2.223 1.274 H22 A1A1P 49 A1A1P H23 H23 H 0 1 N N N N N N ? ? ? -4.652 -0.667 2.135 H23 A1A1P 50 A1A1P H24 H24 H 0 1 N N N N N N ? ? ? -6.910 -0.277 1.200 H24 A1A1P 51 A1A1P H25 H25 H 0 1 N N N N N N ? ? ? -6.857 -1.814 2.096 H25 A1A1P 52 A1A1P H26 H26 H 0 1 N N N N N N ? ? ? -6.859 -1.841 -2.087 H26 A1A1P 53 A1A1P H27 H27 H 0 1 N N N N N N ? ? ? -6.911 -0.293 -1.211 H27 A1A1P 54 A1A1P H28 H28 H 0 1 N N N N N N ? ? ? -4.654 -0.695 -2.143 H28 A1A1P 55 A1A1P H29 H29 H 0 1 N N N N N N ? ? ? -4.559 -2.239 -1.261 H29 A1A1P 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A1P C16 C17 SING N N 1 A1A1P C16 C15 SING N N 2 A1A1P C17 C18 SING N N 3 A1A1P C15 C14 SING N N 4 A1A1P C18 C13 SING N N 5 A1A1P C14 C13 SING N N 6 A1A1P O C DOUB N N 7 A1A1P N C SING N N 8 A1A1P N C1 DOUB N N 9 A1A1P C13 C1 SING N N 10 A1A1P C13 C12 SING N N 11 A1A1P C C20 SING N N 12 A1A1P C1 N1 SING N N 13 A1A1P C12 C11 DOUB Y N 14 A1A1P C12 C2 SING Y N 15 A1A1P C11 C5 SING Y N 16 A1A1P CL C21 SING N N 17 A1A1P C20 C21 SING Y N 18 A1A1P C20 C19 DOUB Y N 19 A1A1P N1 C2 SING N N 20 A1A1P N1 C19 SING N N 21 A1A1P C2 C3 DOUB Y N 22 A1A1P C21 C22 DOUB Y N 23 A1A1P C19 C24 SING Y N 24 A1A1P C5 C6 SING N N 25 A1A1P C5 C4 DOUB Y N 26 A1A1P C6 C7 SING N N 27 A1A1P C6 C10 SING N N 28 A1A1P C7 C8 SING N N 29 A1A1P C8 N2 SING N N 30 A1A1P C3 C4 SING Y N 31 A1A1P C10 C9 SING N N 32 A1A1P C22 C23 SING Y N 33 A1A1P C9 N2 SING N N 34 A1A1P C24 C23 DOUB Y N 35 A1A1P N2 H2 SING N N 36 A1A1P C4 H4 SING N N 37 A1A1P C3 H5 SING N N 38 A1A1P C22 H6 SING N N 39 A1A1P C23 H7 SING N N 40 A1A1P C24 H8 SING N N 41 A1A1P C18 H9 SING N N 42 A1A1P C18 H10 SING N N 43 A1A1P C17 H11 SING N N 44 A1A1P C17 H12 SING N N 45 A1A1P C16 H13 SING N N 46 A1A1P C16 H14 SING N N 47 A1A1P C15 H15 SING N N 48 A1A1P C15 H16 SING N N 49 A1A1P C14 H17 SING N N 50 A1A1P C14 H18 SING N N 51 A1A1P C11 H20 SING N N 52 A1A1P C6 H21 SING N N 53 A1A1P C10 H22 SING N N 54 A1A1P C10 H23 SING N N 55 A1A1P C9 H24 SING N N 56 A1A1P C9 H25 SING N N 57 A1A1P C8 H26 SING N N 58 A1A1P C8 H27 SING N N 59 A1A1P C7 H28 SING N N 60 A1A1P C7 H29 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A1P SMILES ACDLabs 12.01 "Clc1cccc2c1C(=O)N=C1N2c2ccc(cc2C21CCCCC2)C1CCNCC1" A1A1P InChI InChI 1.06 "InChI=1S/C25H26ClN3O/c26-19-5-4-6-21-22(19)23(30)28-24-25(11-2-1-3-12-25)18-15-17(7-8-20(18)29(21)24)16-9-13-27-14-10-16/h4-8,15-16,27H,1-3,9-14H2" A1A1P InChIKey InChI 1.06 MEFDDENEEVLEBY-UHFFFAOYSA-N A1A1P SMILES_CANONICAL CACTVS 3.385 "Clc1cccc2N3c4ccc(cc4C5(CCCCC5)C3=NC(=O)c12)C6CCNCC6" A1A1P SMILES CACTVS 3.385 "Clc1cccc2N3c4ccc(cc4C5(CCCCC5)C3=NC(=O)c12)C6CCNCC6" A1A1P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)Cl)C(=O)N=C3N2c4ccc(cc4C35CCCCC5)C6CCNCC6" A1A1P SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)Cl)C(=O)N=C3N2c4ccc(cc4C35CCCCC5)C6CCNCC6" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A1P "SYSTEMATIC NAME" ACDLabs 12.01 "(12'R)-4'-chloro-9'-(piperidin-4-yl)-5'H-spiro[cyclohexane-1,7'-indolo[1,2-a]quinazolin]-5'-one" A1A1P "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4'-chloranyl-9'-piperidin-4-yl-spiro[cyclohexane-1,7'-indolo[1,2-a]quinazoline]-5'-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A1P "Create component" 2024-08-12 RCSB A1A1P "Initial release" 2024-12-18 RCSB #