data_A1A21 # _chem_comp.id A1A21 _chem_comp.name "(5-bromopyridin-3-yl){4-[(R)-(4-chlorophenyl)(phenyl)methyl]piperazin-1-yl}methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H21 Br Cl N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-21 _chem_comp.pdbx_modified_date 2024-11-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 470.789 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A21 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8W1T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A21 C1 C1 C 0 1 N N R N N N -19.462 2.222 -2.441 2.651 0.655 0.778 C1 A1A21 1 A1A21 C2 C2 C 0 1 Y N N N N N -20.311 3.403 -2.880 3.892 -0.176 0.572 C2 A1A21 2 A1A21 C3 C3 C 0 1 Y N N N N N -19.726 4.527 -3.451 4.238 -0.597 -0.698 C3 A1A21 3 A1A21 C4 C4 C 0 1 Y N N N N N -20.495 5.603 -3.828 5.379 -1.354 -0.888 C4 A1A21 4 A1A21 C5 C5 C 0 1 Y N N N N N -21.852 5.551 -3.627 6.174 -1.690 0.193 C5 A1A21 5 A1A21 C6 C6 C 0 1 Y N N N N N -22.457 4.459 -3.058 5.827 -1.268 1.464 C6 A1A21 6 A1A21 C7 C7 C 0 1 Y N N N N N -21.685 3.388 -2.682 4.686 -0.511 1.653 C7 A1A21 7 A1A21 C8 C8 C 0 1 Y N N N N N -18.845 1.548 -3.659 2.941 2.089 0.415 C8 A1A21 8 A1A21 C11 C9 C 0 1 Y N N N N N -17.729 0.300 -5.885 3.471 4.719 -0.250 C11 A1A21 9 A1A21 C21 C10 C 0 1 N N N N N N -16.764 2.904 2.338 -2.098 -1.517 -0.696 C21 A1A21 10 A1A21 C10 C11 C 0 1 Y N N N N N -19.002 -0.026 -5.478 3.212 3.794 -1.244 C10 A1A21 11 A1A21 C12 C12 C 0 1 Y N N N N N -17.009 1.242 -5.191 3.471 4.328 1.076 C12 A1A21 12 A1A21 C13 C13 C 0 1 Y N N N N N -17.565 1.868 -4.085 3.206 3.013 1.408 C13 A1A21 13 A1A21 C16 C14 C 0 1 N N N N N N -19.020 3.432 -0.378 1.331 -1.285 0.179 C16 A1A21 14 A1A21 C17 C15 C 0 1 N N N N N N -17.925 3.999 0.496 0.331 -1.822 -0.850 C17 A1A21 15 A1A21 C19 C16 C 0 1 N N N N N N -16.631 1.968 0.023 -0.697 0.482 -0.934 C19 A1A21 16 A1A21 C20 C17 C 0 1 N N N N N N -17.779 1.502 -0.843 0.343 0.929 0.098 C20 A1A21 17 A1A21 C23 C18 C 0 1 Y N N N N N -15.956 1.760 2.886 -3.299 -0.661 -0.799 C23 A1A21 18 A1A21 C24 C19 C 0 1 Y N N N N N -14.629 1.551 2.535 -3.348 0.383 -1.723 C24 A1A21 19 A1A21 C26 C20 C 0 1 Y N N N N N -14.454 -0.297 3.882 -5.475 0.959 -1.050 C26 A1A21 20 A1A21 C27 C21 C 0 1 Y N N N N N -15.760 -0.166 4.289 -5.507 -0.059 -0.112 C27 A1A21 21 A1A21 C28 C22 C 0 1 Y N N N N N -16.527 0.867 3.797 -4.408 -0.889 0.024 C28 A1A21 22 A1A21 C9 C23 C 0 1 Y N N N N N -19.558 0.596 -4.371 2.946 2.478 -0.911 C9 A1A21 23 A1A21 N15 N1 N 0 1 N N N N N N -18.439 2.649 -1.466 1.571 0.142 -0.076 N15 A1A21 24 A1A21 N18 N2 N 0 1 N N N N N N -17.085 2.925 1.033 -0.870 -0.974 -0.822 N18 A1A21 25 A1A21 N25 N3 N 0 1 Y N N N N N -13.889 0.538 3.014 -4.417 1.146 -1.816 N25 A1A21 26 A1A21 O22 O1 O 0 1 N N N N N N -17.105 3.807 3.097 -2.217 -2.711 -0.498 O22 A1A21 27 A1A21 BR29 BR1 BR 0 0 N N N N N N -16.486 -1.396 5.526 -7.036 -0.312 0.971 BR29 A1A21 28 A1A21 CL14 CL1 CL 0 0 N N N N N N -22.834 6.906 -4.095 7.607 -2.641 -0.045 CL14 A1A21 29 A1A21 H1 H1 H 0 1 N N N N N N -20.125 1.493 -1.952 2.346 0.599 1.822 H1 A1A21 30 A1A21 H2 H2 H 0 1 N N N N N N -18.657 4.556 -3.600 3.617 -0.336 -1.542 H2 A1A21 31 A1A21 H3 H3 H 0 1 N N N N N N -20.039 6.474 -4.275 5.649 -1.684 -1.881 H3 A1A21 32 A1A21 H4 H4 H 0 1 N N N N N N -23.526 4.442 -2.908 6.447 -1.530 2.308 H4 A1A21 33 A1A21 H5 H5 H 0 1 N N N N N N -22.151 2.526 -2.228 4.418 -0.177 2.644 H5 A1A21 34 A1A21 H6 H6 H 0 1 N N N N N N -17.296 -0.184 -6.748 3.679 5.747 -0.510 H6 A1A21 35 A1A21 H7 H7 H 0 1 N N N N N N -19.569 -0.767 -6.022 3.211 4.099 -2.280 H7 A1A21 36 A1A21 H8 H8 H 0 1 N N N N N N -16.008 1.496 -5.507 3.674 5.051 1.852 H8 A1A21 37 A1A21 H9 H9 H 0 1 N N N N N N -16.995 2.613 -3.550 3.206 2.707 2.444 H9 A1A21 38 A1A21 H10 H10 H 0 1 N N N N N N -19.613 4.257 -0.800 0.924 -1.411 1.182 H10 A1A21 39 A1A21 H11 H11 H 0 1 N N N N N N -19.671 2.785 0.228 2.269 -1.833 0.095 H11 A1A21 40 A1A21 H12 H12 H 0 1 N N N N N N -17.302 4.681 -0.102 0.777 -1.793 -1.844 H12 A1A21 41 A1A21 H13 H13 H 0 1 N N N N N N -18.379 4.554 1.330 0.061 -2.848 -0.597 H13 A1A21 42 A1A21 H14 H14 H 0 1 N N N N N N -16.186 1.098 0.528 -1.646 0.980 -0.737 H14 A1A21 43 A1A21 H15 H15 H 0 1 N N N N N N -15.874 2.450 -0.613 -0.353 0.733 -1.938 H15 A1A21 44 A1A21 H16 H16 H 0 1 N N N N N N -18.506 0.958 -0.222 0.566 1.987 -0.044 H16 A1A21 45 A1A21 H17 H17 H 0 1 N N N N N N -17.394 0.834 -1.628 -0.050 0.772 1.102 H17 A1A21 46 A1A21 H18 H18 H 0 1 N N N N N N -14.168 2.238 1.841 -2.501 0.568 -2.368 H18 A1A21 47 A1A21 H19 H19 H 0 1 N N N N N N -13.864 -1.108 4.282 -6.331 1.609 -1.158 H19 A1A21 48 A1A21 H20 H20 H 0 1 N N N N N N -17.554 0.985 4.110 -4.405 -1.691 0.747 H20 A1A21 49 A1A21 H21 H21 H 0 1 N N N N N N -20.559 0.336 -4.059 2.744 1.755 -1.688 H21 A1A21 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A21 C11 C10 DOUB Y N 1 A1A21 C11 C12 SING Y N 2 A1A21 C10 C9 SING Y N 3 A1A21 C12 C13 DOUB Y N 4 A1A21 C9 C8 DOUB Y N 5 A1A21 CL14 C5 SING N N 6 A1A21 C13 C8 SING Y N 7 A1A21 C4 C5 DOUB Y N 8 A1A21 C4 C3 SING Y N 9 A1A21 C8 C1 SING N N 10 A1A21 C5 C6 SING Y N 11 A1A21 C3 C2 DOUB Y N 12 A1A21 C6 C7 DOUB Y N 13 A1A21 C2 C7 SING Y N 14 A1A21 C2 C1 SING N N 15 A1A21 C1 N15 SING N N 16 A1A21 N15 C20 SING N N 17 A1A21 N15 C16 SING N N 18 A1A21 C20 C19 SING N N 19 A1A21 C16 C17 SING N N 20 A1A21 C19 N18 SING N N 21 A1A21 C17 N18 SING N N 22 A1A21 N18 C21 SING N N 23 A1A21 C21 C23 SING N N 24 A1A21 C21 O22 DOUB N N 25 A1A21 C24 C23 DOUB Y N 26 A1A21 C24 N25 SING Y N 27 A1A21 C23 C28 SING Y N 28 A1A21 N25 C26 DOUB Y N 29 A1A21 C28 C27 DOUB Y N 30 A1A21 C26 C27 SING Y N 31 A1A21 C27 BR29 SING N N 32 A1A21 C1 H1 SING N N 33 A1A21 C3 H2 SING N N 34 A1A21 C4 H3 SING N N 35 A1A21 C6 H4 SING N N 36 A1A21 C7 H5 SING N N 37 A1A21 C11 H6 SING N N 38 A1A21 C10 H7 SING N N 39 A1A21 C12 H8 SING N N 40 A1A21 C13 H9 SING N N 41 A1A21 C16 H10 SING N N 42 A1A21 C16 H11 SING N N 43 A1A21 C17 H12 SING N N 44 A1A21 C17 H13 SING N N 45 A1A21 C19 H14 SING N N 46 A1A21 C19 H15 SING N N 47 A1A21 C20 H16 SING N N 48 A1A21 C20 H17 SING N N 49 A1A21 C24 H18 SING N N 50 A1A21 C26 H19 SING N N 51 A1A21 C28 H20 SING N N 52 A1A21 C9 H21 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A21 SMILES ACDLabs 14.52 "Brc1cc(cnc1)C(=O)N1CCN(CC1)C(c1ccc(Cl)cc1)c1ccccc1" A1A21 InChI InChI 1.06 "InChI=1S/C23H21BrClN3O/c24-20-14-19(15-26-16-20)23(29)28-12-10-27(11-13-28)22(17-4-2-1-3-5-17)18-6-8-21(25)9-7-18/h1-9,14-16,22H,10-13H2/t22-/m1/s1" A1A21 InChIKey InChI 1.06 HUHIPWIDNVSBFL-JOCHJYFZSA-N A1A21 SMILES_CANONICAL CACTVS 3.385 "Clc1ccc(cc1)[C@H](N2CCN(CC2)C(=O)c3cncc(Br)c3)c4ccccc4" A1A21 SMILES CACTVS 3.385 "Clc1ccc(cc1)[CH](N2CCN(CC2)C(=O)c3cncc(Br)c3)c4ccccc4" A1A21 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)[C@H](c2ccc(cc2)Cl)N3CCN(CC3)C(=O)c4cc(cnc4)Br" A1A21 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(c2ccc(cc2)Cl)N3CCN(CC3)C(=O)c4cc(cnc4)Br" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A21 "SYSTEMATIC NAME" ACDLabs 14.52 "(5-bromopyridin-3-yl){4-[(R)-(4-chlorophenyl)(phenyl)methyl]piperazin-1-yl}methanone" A1A21 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(5-bromanylpyridin-3-yl)-[4-[(~{R})-(4-chlorophenyl)-phenyl-methyl]piperazin-1-yl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A21 "Create component" 2024-08-21 RCSB A1A21 "Initial release" 2024-11-20 RCSB #