data_A1A23 # _chem_comp.id A1A23 _chem_comp.name "2-{[(4-amino-5,6-dimethylthieno[2,3-d]pyrimidin-2-yl)methyl]sulfanyl}pyridine-3-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H14 N4 O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-22 _chem_comp.pdbx_modified_date 2024-08-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 346.427 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A23 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9D9K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A23 C1 C1 C 0 1 N N N N N N -53.613 29.090 29.621 6.552 -1.184 0.819 C1 A1A23 1 A1A23 C11 C2 C 0 1 N N N N N N -46.101 29.438 30.208 -0.745 1.169 0.367 C11 A1A23 2 A1A23 C13 C3 C 0 1 Y N N N N N -43.430 29.793 30.907 -3.366 0.396 0.229 C13 A1A23 3 A1A23 C15 C4 C 0 1 Y N N N N N -42.173 29.078 29.131 -4.663 2.072 1.148 C15 A1A23 4 A1A23 C16 C5 C 0 1 Y N N N N N -40.989 29.384 29.766 -5.830 1.368 0.908 C16 A1A23 5 A1A23 C17 C6 C 0 1 Y N N N N N -41.037 29.923 31.039 -5.765 0.123 0.309 C17 A1A23 6 A1A23 C18 C7 C 0 1 Y N N N N N -42.275 30.143 31.642 -4.507 -0.382 -0.041 C18 A1A23 7 A1A23 C19 C8 C 0 1 N N N N N N -42.276 30.763 33.020 -4.380 -1.701 -0.682 C19 A1A23 8 A1A23 C2 C9 C 0 1 Y N N N N N -52.173 29.239 30.009 5.140 -0.689 0.641 C2 A1A23 9 A1A23 C23 C10 C 0 1 N N N N N N -52.487 30.407 32.220 5.577 0.205 -1.631 C23 A1A23 10 A1A23 C3 C11 C 0 1 Y N N N N N -51.645 29.835 31.115 4.699 -0.073 -0.438 C3 A1A23 11 A1A23 C4 C12 C 0 1 Y N N N N N -50.195 29.831 31.094 3.302 0.316 -0.389 C4 A1A23 12 A1A23 C5 C13 C 0 1 Y N N N N N -49.199 30.344 31.968 2.499 0.985 -1.348 C5 A1A23 13 A1A23 C7 C14 C 0 1 Y N N N N N -47.563 29.582 30.528 0.705 0.863 0.095 C7 A1A23 14 A1A23 C9 C15 C 0 1 Y N N N N N -49.691 29.212 29.948 2.699 -0.049 0.817 C9 A1A23 15 A1A23 N14 N1 N 0 1 Y N N N N N -43.383 29.273 29.677 -3.487 1.581 0.810 N14 A1A23 16 A1A23 N22 N2 N 0 1 N N N N N N -49.486 31.022 33.091 3.032 1.374 -2.563 N22 A1A23 17 A1A23 N6 N3 N 0 1 Y N N N N N -47.890 30.207 31.670 1.229 1.230 -1.061 N6 A1A23 18 A1A23 N8 N4 N 0 1 Y N N N N N -48.407 29.063 29.628 1.407 0.242 1.014 N8 A1A23 19 A1A23 O20 O1 O 0 1 N N N N N N -41.221 31.342 33.393 -3.282 -2.128 -0.982 O20 A1A23 20 A1A23 O21 O2 O 0 1 N N N N N N -43.310 30.675 33.718 -5.481 -2.436 -0.935 O21 A1A23 21 A1A23 S10 S1 S 0 1 Y N N N N N -50.960 28.647 28.908 3.873 -0.864 1.841 S10 A1A23 22 A1A23 S12 S2 S 0 1 N N N N N N -45.044 30.020 31.574 -1.769 -0.211 -0.200 S12 A1A23 23 A1A23 H1 H1 H 0 1 N N N N N N -53.680 28.599 28.639 7.159 -0.399 1.270 H1 A1A23 24 A1A23 H2 H2 H 0 1 N N N N N N -54.134 28.479 30.373 6.551 -2.060 1.469 H2 A1A23 25 A1A23 H3 H3 H 0 1 N N N N N N -54.083 30.083 29.567 6.968 -1.453 -0.152 H3 A1A23 26 A1A23 H4 H4 H 0 1 N N N N N N -45.882 28.377 30.016 -0.891 1.313 1.438 H4 A1A23 27 A1A23 H5 H5 H 0 1 N N N N N N -45.875 30.028 29.307 -1.031 2.076 -0.164 H5 A1A23 28 A1A23 H6 H6 H 0 1 N N N N N N -42.124 28.657 28.137 -4.716 3.042 1.619 H6 A1A23 29 A1A23 H7 H7 H 0 1 N N N N N N -40.042 29.206 29.279 -6.785 1.786 1.191 H7 A1A23 30 A1A23 H8 H8 H 0 1 N N N N N N -40.125 30.171 31.561 -6.663 -0.444 0.113 H8 A1A23 31 A1A23 H9 H9 H 0 1 N N N N N N -52.683 29.629 32.973 5.438 -0.579 -2.375 H9 A1A23 32 A1A23 H10 H10 H 0 1 N N N N N N -51.954 31.246 32.690 5.309 1.168 -2.063 H10 A1A23 33 A1A23 H11 H11 H 0 1 N N N N N N -53.441 30.765 31.806 6.621 0.225 -1.316 H11 A1A23 34 A1A23 H12 H12 H 0 1 N N N N N N -48.637 31.319 33.528 3.902 1.046 -2.839 H12 A1A23 35 A1A23 H13 H13 H 0 1 N N N N N N -50.042 31.822 32.864 2.536 1.976 -3.140 H13 A1A23 36 A1A23 H14 H14 H 0 1 N N N N N N -43.167 31.107 34.552 -5.348 -3.296 -1.357 H14 A1A23 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A23 S10 C9 SING Y N 1 A1A23 S10 C2 SING Y N 2 A1A23 C15 N14 DOUB Y N 3 A1A23 C15 C16 SING Y N 4 A1A23 C1 C2 SING N N 5 A1A23 N8 C9 DOUB Y N 6 A1A23 N8 C7 SING Y N 7 A1A23 N14 C13 SING Y N 8 A1A23 C16 C17 DOUB Y N 9 A1A23 C9 C4 SING Y N 10 A1A23 C2 C3 DOUB Y N 11 A1A23 C11 C7 SING N N 12 A1A23 C11 S12 SING N N 13 A1A23 C7 N6 DOUB Y N 14 A1A23 C13 S12 SING N N 15 A1A23 C13 C18 DOUB Y N 16 A1A23 C17 C18 SING Y N 17 A1A23 C4 C3 SING Y N 18 A1A23 C4 C5 DOUB Y N 19 A1A23 C3 C23 SING N N 20 A1A23 C18 C19 SING N N 21 A1A23 N6 C5 SING Y N 22 A1A23 C5 N22 SING N N 23 A1A23 C19 O20 DOUB N N 24 A1A23 C19 O21 SING N N 25 A1A23 C1 H1 SING N N 26 A1A23 C1 H2 SING N N 27 A1A23 C1 H3 SING N N 28 A1A23 C11 H4 SING N N 29 A1A23 C11 H5 SING N N 30 A1A23 C15 H6 SING N N 31 A1A23 C16 H7 SING N N 32 A1A23 C17 H8 SING N N 33 A1A23 C23 H9 SING N N 34 A1A23 C23 H10 SING N N 35 A1A23 C23 H11 SING N N 36 A1A23 N22 H12 SING N N 37 A1A23 N22 H13 SING N N 38 A1A23 O21 H14 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A23 SMILES ACDLabs 14.52 "O=C(O)c1cccnc1SCc1nc(N)c2c(n1)sc(C)c2C" A1A23 InChI InChI 1.06 "InChI=1S/C15H14N4O2S2/c1-7-8(2)23-14-11(7)12(16)18-10(19-14)6-22-13-9(15(20)21)4-3-5-17-13/h3-5H,6H2,1-2H3,(H,20,21)(H2,16,18,19)" A1A23 InChIKey InChI 1.06 KJEORLGJPGWLTQ-UHFFFAOYSA-N A1A23 SMILES_CANONICAL CACTVS 3.385 "Cc1sc2nc(CSc3ncccc3C(O)=O)nc(N)c2c1C" A1A23 SMILES CACTVS 3.385 "Cc1sc2nc(CSc3ncccc3C(O)=O)nc(N)c2c1C" A1A23 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(sc2c1c(nc(n2)CSc3c(cccn3)C(=O)O)N)C" A1A23 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(sc2c1c(nc(n2)CSc3c(cccn3)C(=O)O)N)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A23 "SYSTEMATIC NAME" ACDLabs 14.52 "2-{[(4-amino-5,6-dimethylthieno[2,3-d]pyrimidin-2-yl)methyl]sulfanyl}pyridine-3-carboxylic acid" A1A23 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(4-azanyl-5,6-dimethyl-thieno[2,3-d]pyrimidin-2-yl)methylsulfanyl]pyridine-3-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A23 "Create component" 2024-08-22 RCSB A1A23 "Initial release" 2024-09-04 RCSB #