data_A1A2E # _chem_comp.id A1A2E _chem_comp.name "4-[(morpholin-4-yl)methyl]-2-{4-[(2R)-5-oxopyrrolidin-2-yl]phenyl}quinoline-7-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H24 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-16 _chem_comp.pdbx_modified_date 2025-08-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 412.484 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A2E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9D36 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A2E C1 C1 C 0 1 Y N N N N N -5.671 -9.581 -7.605 3.594 0.335 0.339 C1 A1A2E 1 A1A2E C2 C2 C 0 1 Y N N N N N -5.234 -8.849 -8.703 4.230 -0.794 -0.145 C2 A1A2E 2 A1A2E C3 C3 C 0 1 Y N N N N N -4.416 -7.740 -8.487 3.495 -1.916 -0.485 C3 A1A2E 3 A1A2E C4 C4 C 0 1 Y N N N N N -4.001 -7.415 -7.196 2.123 -1.914 -0.342 C4 A1A2E 4 A1A2E C5 C5 C 0 1 Y N N N N N -4.404 -8.190 -6.103 1.477 -0.780 0.146 C5 A1A2E 5 A1A2E C6 C6 C 0 1 Y N N N N N -5.266 -9.259 -6.316 2.222 0.348 0.486 C6 A1A2E 6 A1A2E C7 C7 C 0 1 Y N N N N N -3.830 -7.949 -4.715 0.002 -0.772 0.303 C7 A1A2E 7 A1A2E C9 C8 C 0 1 Y N N N N N -2.580 -7.601 -2.282 -2.714 -0.752 0.592 C9 A1A2E 8 A1A2E C10 C9 C 0 1 Y N N N N N -3.651 -8.495 -2.365 -1.985 0.403 0.939 C10 A1A2E 9 A1A2E C11 C10 C 0 1 Y N N N N N -4.279 -8.665 -3.600 -0.630 0.383 0.790 C11 A1A2E 10 A1A2E C13 C11 C 0 1 Y N N N N N -0.430 -5.830 -2.194 -4.118 -3.046 -0.113 C13 A1A2E 11 A1A2E C14 C12 C 0 1 Y N N N N N -0.834 -6.482 -1.041 -4.795 -1.915 0.376 C14 A1A2E 12 A1A2E C15 C13 C 0 1 Y N N N N N -1.903 -7.368 -1.082 -4.112 -0.792 0.722 C15 A1A2E 13 A1A2E C17 C14 C 0 1 N N N N N N -4.140 -9.303 -1.124 -2.687 1.631 1.460 C17 A1A2E 14 A1A2E C19 C15 C 0 1 N N N N N N -3.500 -10.797 0.721 -4.352 3.283 0.852 C19 A1A2E 15 A1A2E C21 C16 C 0 1 N N N N N N -1.397 -12.002 -0.760 -3.135 3.623 -1.706 C21 A1A2E 16 A1A2E N1 N1 N 0 1 Y N N N N N -2.789 -7.121 -4.596 -0.686 -1.848 -0.024 N1 A1A2E 17 A1A2E C8 C17 C 0 1 Y N N N N N -2.174 -6.928 -3.434 -2.016 -1.885 0.100 C8 A1A2E 18 A1A2E C12 C18 C 0 1 Y N N N N N -1.099 -6.048 -3.385 -2.740 -3.036 -0.252 C12 A1A2E 19 A1A2E C81 C19 C 0 1 N N N N N N 0.648 -4.933 -2.161 -4.859 -4.218 -0.470 C81 A1A2E 20 A1A2E N3 N2 N 0 1 N N N N N N -3.020 -10.134 -0.527 -3.365 2.316 0.350 N3 A1A2E 21 A1A2E C20 C20 C 0 1 N N N N N N -2.322 -11.575 1.380 -5.075 3.928 -0.333 C20 A1A2E 22 A1A2E O3 O1 O 0 1 N N N N N N -1.797 -12.575 0.460 -4.112 4.536 -1.198 O3 A1A2E 23 A1A2E C22 C21 C 0 1 N N N N N N -2.572 -11.216 -1.433 -2.393 2.975 -0.534 C22 A1A2E 24 A1A2E C23 C22 C 0 1 N N R N N N -5.707 -9.402 -10.083 5.729 -0.802 -0.303 C23 A1A2E 25 A1A2E N4 N3 N 0 1 N N N N N N -4.637 -10.364 -10.567 6.360 -0.068 0.799 N4 A1A2E 26 A1A2E C25 C23 C 0 1 N N N N N N -3.883 -9.771 -11.506 7.337 0.740 0.352 C25 A1A2E 27 A1A2E O4 O2 O 0 1 N N N N N N -2.933 -10.344 -12.071 8.024 1.453 1.052 O4 A1A2E 28 A1A2E C26 C24 C 0 1 N N N N N N -4.330 -8.305 -11.735 7.455 0.629 -1.153 C26 A1A2E 29 A1A2E C27 C25 C 0 1 N N N N N N -5.764 -8.524 -11.390 6.134 -0.048 -1.589 C27 A1A2E 30 A1A2E N55 N4 N 0 1 N N N N N N 1.536 -4.192 -2.133 -5.448 -5.147 -0.753 N55 A1A2E 31 A1A2E H79 H1 H 0 1 N N N N N N -6.338 -10.416 -7.757 4.174 1.206 0.607 H79 A1A2E 32 A1A2E H3 H2 H 0 1 N N N N N N -4.103 -7.131 -9.322 3.997 -2.795 -0.863 H3 A1A2E 33 A1A2E H4 H3 H 0 1 N N N N N N -3.363 -6.558 -7.038 1.550 -2.791 -0.608 H4 A1A2E 34 A1A2E H6 H4 H 0 1 N N N N N N -5.622 -9.840 -5.478 1.727 1.229 0.869 H6 A1A2E 35 A1A2E H11 H5 H 0 1 N N N N N N -5.110 -9.348 -3.695 -0.045 1.253 1.048 H11 A1A2E 36 A1A2E H14 H6 H 0 1 N N N N N N -0.318 -6.302 -0.110 -5.870 -1.938 0.479 H14 A1A2E 37 A1A2E H15 H7 H 0 1 N N N N N N -2.212 -7.879 -0.182 -4.644 0.071 1.094 H15 A1A2E 38 A1A2E H172 H8 H 0 0 N N N N N N -4.509 -8.600 -0.362 -3.422 1.339 2.210 H172 A1A2E 39 A1A2E H171 H9 H 0 0 N N N N N N -4.957 -9.972 -1.432 -1.956 2.304 1.909 H171 A1A2E 40 A1A2E H191 H10 H 0 0 N N N N N N -3.874 -10.035 1.421 -5.076 2.768 1.484 H191 A1A2E 41 A1A2E H192 H11 H 0 0 N N N N N N -4.311 -11.498 0.475 -3.845 4.053 1.433 H192 A1A2E 42 A1A2E H211 H12 H 0 0 N N N N N N -1.065 -12.801 -1.439 -3.631 2.851 -2.295 H211 A1A2E 43 A1A2E H212 H13 H 0 0 N N N N N N -0.563 -11.309 -0.574 -2.426 4.161 -2.334 H212 A1A2E 44 A1A2E H12 H14 H 0 1 N N N N N N -0.785 -5.532 -4.280 -2.225 -3.908 -0.628 H12 A1A2E 45 A1A2E H201 H16 H 0 0 N N N N N N -2.682 -12.075 2.291 -5.626 3.165 -0.882 H201 A1A2E 46 A1A2E H202 H17 H 0 0 N N N N N N -1.522 -10.867 1.642 -5.767 4.686 0.032 H202 A1A2E 47 A1A2E H222 H18 H 0 0 N N N N N N -2.227 -10.781 -2.382 -1.687 2.236 -0.915 H222 A1A2E 48 A1A2E H221 H19 H 0 0 N N N N N N -3.409 -11.902 -1.628 -1.854 3.741 0.024 H221 A1A2E 49 A1A2E H23 H20 H 0 1 N N N N N N -6.663 -9.932 -9.959 6.099 -1.827 -0.335 H23 A1A2E 50 A1A2E H24 H21 H 0 1 N N N N N N -4.513 -11.299 -10.236 6.105 -0.153 1.731 H24 A1A2E 51 A1A2E H262 H22 H 0 0 N N N N N N -3.832 -7.598 -11.055 7.544 1.618 -1.602 H262 A1A2E 52 A1A2E H261 H23 H 0 0 N N N N N N -4.189 -7.975 -12.775 8.309 0.008 -1.423 H261 A1A2E 53 A1A2E H271 H24 H 0 0 N N N N N N -6.271 -7.567 -11.197 6.305 -0.741 -2.413 H271 A1A2E 54 A1A2E H272 H25 H 0 0 N N N N N N -6.284 -9.058 -12.199 5.384 0.696 -1.857 H272 A1A2E 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A2E O4 C25 DOUB N N 1 A1A2E C26 C25 SING N N 2 A1A2E C26 C27 SING N N 3 A1A2E C25 N4 SING N N 4 A1A2E C27 C23 SING N N 5 A1A2E N4 C23 SING N N 6 A1A2E C23 C2 SING N N 7 A1A2E C2 C3 DOUB Y N 8 A1A2E C2 C1 SING Y N 9 A1A2E C3 C4 SING Y N 10 A1A2E C1 C6 DOUB Y N 11 A1A2E C4 C5 DOUB Y N 12 A1A2E C6 C5 SING Y N 13 A1A2E C5 C7 SING N N 14 A1A2E C7 N1 DOUB Y N 15 A1A2E C7 C11 SING Y N 16 A1A2E N1 C8 SING Y N 17 A1A2E C11 C10 DOUB Y N 18 A1A2E C8 C12 DOUB Y N 19 A1A2E C8 C9 SING Y N 20 A1A2E C12 C13 SING Y N 21 A1A2E C10 C9 SING Y N 22 A1A2E C10 C17 SING N N 23 A1A2E C9 C15 DOUB Y N 24 A1A2E C13 C81 SING N N 25 A1A2E C13 C14 DOUB Y N 26 A1A2E C81 N55 TRIP N N 27 A1A2E C22 C21 SING N N 28 A1A2E C22 N3 SING N N 29 A1A2E C17 N3 SING N N 30 A1A2E C15 C14 SING Y N 31 A1A2E C21 O3 SING N N 32 A1A2E N3 C19 SING N N 33 A1A2E O3 C20 SING N N 34 A1A2E C19 C20 SING N N 35 A1A2E C1 H79 SING N N 36 A1A2E C3 H3 SING N N 37 A1A2E C4 H4 SING N N 38 A1A2E C6 H6 SING N N 39 A1A2E C11 H11 SING N N 40 A1A2E C14 H14 SING N N 41 A1A2E C15 H15 SING N N 42 A1A2E C17 H172 SING N N 43 A1A2E C17 H171 SING N N 44 A1A2E C19 H191 SING N N 45 A1A2E C19 H192 SING N N 46 A1A2E C21 H211 SING N N 47 A1A2E C21 H212 SING N N 48 A1A2E C12 H12 SING N N 49 A1A2E C20 H201 SING N N 50 A1A2E C20 H202 SING N N 51 A1A2E C22 H222 SING N N 52 A1A2E C22 H221 SING N N 53 A1A2E C23 H23 SING N N 54 A1A2E N4 H24 SING N N 55 A1A2E C26 H262 SING N N 56 A1A2E C26 H261 SING N N 57 A1A2E C27 H271 SING N N 58 A1A2E C27 H272 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A2E SMILES ACDLabs 12.01 "O=C1CCC(N1)c1ccc(cc1)c1cc(CN2CCOCC2)c2ccc(C#N)cc2n1" A1A2E InChI InChI 1.06 "InChI=1S/C25H24N4O2/c26-15-17-1-6-21-20(16-29-9-11-31-12-10-29)14-23(27-24(21)13-17)19-4-2-18(3-5-19)22-7-8-25(30)28-22/h1-6,13-14,22H,7-12,16H2,(H,28,30)/t22-/m1/s1" A1A2E InChIKey InChI 1.06 MUVCLMZDXXUHRB-JOCHJYFZSA-N A1A2E SMILES_CANONICAL CACTVS 3.385 "O=C1CC[C@@H](N1)c2ccc(cc2)c3cc(CN4CCOCC4)c5ccc(cc5n3)C#N" A1A2E SMILES CACTVS 3.385 "O=C1CC[CH](N1)c2ccc(cc2)c3cc(CN4CCOCC4)c5ccc(cc5n3)C#N" A1A2E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1c2cc(c3ccc(cc3n2)C#N)CN4CCOCC4)[C@H]5CCC(=O)N5" A1A2E SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1c2cc(c3ccc(cc3n2)C#N)CN4CCOCC4)C5CCC(=O)N5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A2E "SYSTEMATIC NAME" ACDLabs 12.01 "4-[(morpholin-4-yl)methyl]-2-{4-[(2R)-5-oxopyrrolidin-2-yl]phenyl}quinoline-7-carbonitrile" A1A2E "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-(morpholin-4-ylmethyl)-2-[4-[(2~{R})-5-oxidanylidenepyrrolidin-2-yl]phenyl]quinoline-7-carbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A2E "Create component" 2024-08-16 RCSB A1A2E "Initial release" 2025-08-13 RCSB #