data_A1A2F # _chem_comp.id A1A2F _chem_comp.name "[(2R,3S)-3-methyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H18 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-16 _chem_comp.pdbx_modified_date 2025-05-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 246.308 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A2F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9D6G _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A2F N2 N1 N 0 1 Y N N N N N 14.316 -0.125 4.090 -0.686 -1.775 0.198 N2 A1A2F 1 A1A2F C3 C1 C 0 1 N N N N N N 14.514 -0.489 -0.798 3.781 -0.313 0.573 C3 A1A2F 2 A1A2F C6 C2 C 0 1 Y N N N N N 14.478 0.917 3.227 -0.401 -0.482 0.322 C6 A1A2F 3 A1A2F C9 C3 C 0 1 Y N N N N N 14.981 2.133 3.716 -1.463 0.435 0.335 C9 A1A2F 4 A1A2F C12 C4 C 0 1 N N R N N N 13.422 -0.514 1.493 1.678 -0.385 -0.771 C12 A1A2F 5 A1A2F C1 C5 C 0 1 N N N N N N 13.375 -2.612 -0.046 2.957 1.753 -0.568 C1 A1A2F 6 A1A2F C10 C6 C 0 1 Y N N N N N 15.315 3.458 3.272 -1.575 1.888 0.448 C10 A1A2F 7 A1A2F C11 C7 C 0 1 Y N N N N N 15.788 4.158 4.348 -2.885 2.182 0.396 C11 A1A2F 8 A1A2F C13 C8 C 0 1 N N N N N N 12.029 -0.125 0.997 0.962 0.171 -2.003 C13 A1A2F 9 A1A2F C2 C9 C 0 1 N N S N N N 14.183 -1.347 0.377 3.076 0.231 -0.672 C2 A1A2F 10 A1A2F C4 C10 C 0 1 N N N N N N 15.298 0.694 -0.342 2.936 0.005 1.809 C4 A1A2F 11 A1A2F C5 C11 C 0 1 N N N N N N 14.647 1.509 0.792 1.542 -0.604 1.639 C5 A1A2F 12 A1A2F C7 C12 C 0 1 Y N N N N N 14.656 0.020 5.393 -1.935 -2.190 0.090 C7 A1A2F 13 A1A2F C8 C13 C 0 1 Y N N N N N 15.276 2.127 5.116 -2.778 -0.053 0.217 C8 A1A2F 14 A1A2F N1 N2 N 0 1 N N N N N N 14.137 0.686 1.910 0.909 -0.052 0.435 N1 A1A2F 15 A1A2F N3 N3 N 0 1 Y N N N N N 15.118 1.104 5.990 -2.961 -1.367 0.098 N3 A1A2F 16 A1A2F N4 N4 N 0 1 Y N N N N N 15.754 3.363 5.488 -3.614 1.029 0.257 N4 A1A2F 17 A1A2F O1 O1 O 0 1 N N N N N N 11.353 0.566 2.041 -0.280 -0.512 -2.181 O1 A1A2F 18 A1A2F H6 H1 H 0 1 N N N N N N 13.584 -0.150 -1.278 3.901 -1.393 0.481 H6 A1A2F 19 A1A2F H7 H2 H 0 1 N N N N N N 15.109 -1.068 -1.519 4.760 0.155 0.671 H7 A1A2F 20 A1A2F H2 H3 H 0 1 N N N N N N 13.298 -1.174 2.364 1.764 -1.468 -0.859 H2 A1A2F 21 A1A2F H3 H4 H 0 1 N N N N N N 13.150 -3.218 0.844 3.953 2.191 -0.495 H3 A1A2F 22 A1A2F H5 H5 H 0 1 N N N N N N 12.435 -2.303 -0.526 2.455 2.140 -1.455 H5 A1A2F 23 A1A2F H4 H6 H 0 1 N N N N N N 13.970 -3.207 -0.754 2.379 2.012 0.319 H4 A1A2F 24 A1A2F H13 H7 H 0 1 N N N N N N 15.211 3.835 2.265 -0.762 2.591 0.554 H13 A1A2F 25 A1A2F H14 H8 H 0 1 N N N N N N 16.137 5.180 4.316 -3.301 3.176 0.454 H14 A1A2F 26 A1A2F H17 H9 H 0 1 N N N N N N 12.118 0.529 0.117 0.773 1.236 -1.864 H17 A1A2F 27 A1A2F H16 H10 H 0 1 N N N N N N 11.466 -1.030 0.726 1.587 0.025 -2.884 H16 A1A2F 28 A1A2F H1 H11 H 0 1 N N N N N N 15.126 -1.695 0.823 3.652 -0.029 -1.560 H1 A1A2F 29 A1A2F H8 H12 H 0 1 N N N N N N 16.277 0.339 0.012 3.412 -0.417 2.694 H8 A1A2F 30 A1A2F H9 H13 H 0 1 N N N N N N 15.440 1.362 -1.204 2.849 1.086 1.922 H9 A1A2F 31 A1A2F H11 H14 H 0 1 N N N N N N 15.398 2.207 1.191 1.629 -1.686 1.539 H11 A1A2F 32 A1A2F H10 H15 H 0 1 N N N N N N 13.806 2.078 0.370 0.933 -0.367 2.511 H10 A1A2F 33 A1A2F H12 H16 H 0 1 N N N N N N 14.535 -0.853 6.017 -2.122 -3.249 -0.008 H12 A1A2F 34 A1A2F H15 H17 H 0 1 N N N N N N 16.027 3.639 6.410 -4.581 0.986 0.197 H15 A1A2F 35 A1A2F H18 H18 H 0 1 N N N N N N 10.485 0.814 1.747 -0.789 -0.210 -2.946 H18 A1A2F 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A2F C3 C4 SING N N 1 A1A2F C3 C2 SING N N 2 A1A2F C4 C5 SING N N 3 A1A2F C1 C2 SING N N 4 A1A2F C2 C12 SING N N 5 A1A2F C5 N1 SING N N 6 A1A2F C13 C12 SING N N 7 A1A2F C13 O1 SING N N 8 A1A2F C12 N1 SING N N 9 A1A2F N1 C6 SING N N 10 A1A2F C6 C9 DOUB Y N 11 A1A2F C6 N2 SING Y N 12 A1A2F C10 C9 SING Y N 13 A1A2F C10 C11 DOUB Y N 14 A1A2F C9 C8 SING Y N 15 A1A2F N2 C7 DOUB Y N 16 A1A2F C11 N4 SING Y N 17 A1A2F C8 N4 SING Y N 18 A1A2F C8 N3 DOUB Y N 19 A1A2F C7 N3 SING Y N 20 A1A2F C3 H6 SING N N 21 A1A2F C3 H7 SING N N 22 A1A2F C12 H2 SING N N 23 A1A2F C1 H3 SING N N 24 A1A2F C1 H5 SING N N 25 A1A2F C1 H4 SING N N 26 A1A2F C10 H13 SING N N 27 A1A2F C11 H14 SING N N 28 A1A2F C13 H17 SING N N 29 A1A2F C13 H16 SING N N 30 A1A2F C2 H1 SING N N 31 A1A2F C4 H8 SING N N 32 A1A2F C4 H9 SING N N 33 A1A2F C5 H11 SING N N 34 A1A2F C5 H10 SING N N 35 A1A2F C7 H12 SING N N 36 A1A2F N4 H15 SING N N 37 A1A2F O1 H18 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A2F SMILES ACDLabs 12.01 "OCC1C(C)CCCN1c1ncnc2[NH]ccc12" A1A2F InChI InChI 1.06 "InChI=1S/C13H18N4O/c1-9-3-2-6-17(11(9)7-18)13-10-4-5-14-12(10)15-8-16-13/h4-5,8-9,11,18H,2-3,6-7H2,1H3,(H,14,15,16)/t9-,11-/m0/s1" A1A2F InChIKey InChI 1.06 GXQARUAFSUJAQV-ONGXEEELSA-N A1A2F SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CCCN([C@H]1CO)c2ncnc3[nH]ccc23" A1A2F SMILES CACTVS 3.385 "C[CH]1CCCN([CH]1CO)c2ncnc3[nH]ccc23" A1A2F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1CCCN([C@H]1CO)c2c3cc[nH]c3ncn2" A1A2F SMILES "OpenEye OEToolkits" 2.0.7 "CC1CCCN(C1CO)c2c3cc[nH]c3ncn2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A2F "SYSTEMATIC NAME" ACDLabs 12.01 "[(2R,3S)-3-methyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol" A1A2F "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{R},3~{S})-3-methyl-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A2F "Create component" 2024-08-16 RCSB A1A2F "Initial release" 2025-05-21 RCSB #