data_A1A3F # _chem_comp.id A1A3F _chem_comp.name "(3P)-3-(6-amino-4-methylpyridin-2-yl)-5-[(methylamino)methyl]benzonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H16 N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-23 _chem_comp.pdbx_modified_date 2025-04-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 252.314 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A3F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9CW8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A3F N01 N1 N 0 1 Y N N N N N 65.325 27.941 -185.340 1.839 1.292 -0.085 N01 A1A3F 1 A1A3F C02 C1 C 0 1 Y N N N N N 66.414 28.368 -186.019 3.118 1.622 -0.020 C02 A1A3F 2 A1A3F N02 N2 N 0 1 N N N N N N 67.376 27.487 -186.371 3.485 2.962 -0.057 N02 A1A3F 3 A1A3F C03 C2 C 0 1 Y N N N N N 66.537 29.702 -186.391 4.101 0.642 0.085 C03 A1A3F 4 A1A3F C04 C3 C 0 1 Y N N N N N 65.539 30.589 -186.031 3.727 -0.690 0.121 C04 A1A3F 5 A1A3F C05 C4 C 0 1 Y N N N N N 64.439 30.132 -185.320 2.378 -1.004 0.051 C05 A1A3F 6 A1A3F C06 C5 C 0 1 Y N N N N N 64.342 28.788 -184.976 1.447 0.024 -0.053 C06 A1A3F 7 A1A3F C07 C6 C 0 1 N N N N N N 65.634 32.035 -186.414 4.765 -1.778 0.234 C07 A1A3F 8 A1A3F C11 C7 C 0 1 Y N N N N N 63.173 28.258 -184.210 0.001 -0.300 -0.129 C11 A1A3F 9 A1A3F C12 C8 C 0 1 Y N N N N N 62.698 28.962 -183.105 -0.426 -1.617 0.008 C12 A1A3F 10 A1A3F C13 C9 C 0 1 Y N N N N N 61.597 28.468 -182.384 -1.786 -1.913 -0.064 C13 A1A3F 11 A1A3F C14 C10 C 0 1 Y N N N N N 61.006 27.290 -182.779 -2.711 -0.887 -0.273 C14 A1A3F 12 A1A3F C15 C11 C 0 1 Y N N N N N 61.478 26.571 -183.875 -2.279 0.417 -0.408 C15 A1A3F 13 A1A3F C16 C12 C 0 1 Y N N N N N 62.560 27.068 -184.607 -0.933 0.716 -0.333 C16 A1A3F 14 A1A3F C17 C13 C 0 1 N N N N N N 61.127 29.067 -181.341 -2.235 -3.266 0.076 C17 A1A3F 15 A1A3F C19 C14 C 0 1 N N N N N N 60.747 25.285 -184.211 -3.281 1.520 -0.634 C19 A1A3F 16 A1A3F N20 N3 N 0 1 N N N N N N 61.627 24.161 -184.604 -3.718 2.057 0.661 N20 A1A3F 17 A1A3F C21 C15 C 0 1 N N N N N N 62.721 23.902 -183.649 -4.698 3.136 0.480 C21 A1A3F 18 A1A3F N18 N4 N 0 1 N N N N N N 60.700 29.663 -180.437 -2.590 -4.339 0.187 N18 A1A3F 19 A1A3F H1 H1 H 0 1 N N N N N N 67.124 26.573 -186.053 2.805 3.650 -0.130 H1 A1A3F 20 A1A3F H2 H2 H 0 1 N N N N N N 67.472 27.479 -187.366 4.422 3.210 -0.009 H2 A1A3F 21 A1A3F H3 H3 H 0 1 N N N N N N 67.397 30.039 -186.951 5.144 0.918 0.137 H3 A1A3F 22 A1A3F H4 H4 H 0 1 N N N N N N 63.658 30.820 -185.033 2.055 -2.034 0.076 H4 A1A3F 23 A1A3F H5 H5 H 0 1 N N N N N N 65.162 32.186 -187.396 4.951 -1.994 1.286 H5 A1A3F 24 A1A3F H6 H6 H 0 1 N N N N N N 65.118 32.648 -185.661 4.404 -2.678 -0.264 H6 A1A3F 25 A1A3F H7 H7 H 0 1 N N N N N N 66.692 32.332 -186.466 5.690 -1.447 -0.239 H7 A1A3F 26 A1A3F H8 H8 H 0 1 N N N N N N 63.174 29.883 -182.804 0.293 -2.406 0.169 H8 A1A3F 27 A1A3F H9 H9 H 0 1 N N N N N N 60.157 26.914 -182.227 -3.765 -1.114 -0.330 H9 A1A3F 28 A1A3F H10 H10 H 0 1 N N N N N N 62.920 26.535 -185.475 -0.602 1.739 -0.435 H10 A1A3F 29 A1A3F H11 H11 H 0 1 N N N N N N 60.058 25.489 -185.044 -2.821 2.315 -1.220 H11 A1A3F 30 A1A3F H12 H12 H 0 1 N N N N N N 60.171 24.977 -183.326 -4.142 1.123 -1.172 H12 A1A3F 31 A1A3F H13 H13 H 0 1 N N N N N N 61.069 23.334 -184.677 -4.090 1.326 1.249 H13 A1A3F 32 A1A3F H15 H15 H 0 1 N N N N N N 63.329 23.058 -184.007 -4.247 3.943 -0.098 H15 A1A3F 33 A1A3F H16 H16 H 0 1 N N N N N N 63.353 24.798 -183.564 -5.569 2.752 -0.050 H16 A1A3F 34 A1A3F H17 H17 H 0 1 N N N N N N 62.297 23.657 -182.664 -5.004 3.516 1.455 H17 A1A3F 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A3F C07 C04 SING N N 1 A1A3F C03 C04 DOUB Y N 2 A1A3F C03 C02 SING Y N 3 A1A3F N02 C02 SING N N 4 A1A3F C04 C05 SING Y N 5 A1A3F C02 N01 DOUB Y N 6 A1A3F N01 C06 SING Y N 7 A1A3F C05 C06 DOUB Y N 8 A1A3F C06 C11 SING N N 9 A1A3F C16 C11 DOUB Y N 10 A1A3F C16 C15 SING Y N 11 A1A3F N20 C19 SING N N 12 A1A3F N20 C21 SING N N 13 A1A3F C19 C15 SING N N 14 A1A3F C11 C12 SING Y N 15 A1A3F C15 C14 DOUB Y N 16 A1A3F C12 C13 DOUB Y N 17 A1A3F C14 C13 SING Y N 18 A1A3F C13 C17 SING N N 19 A1A3F C17 N18 TRIP N N 20 A1A3F N02 H1 SING N N 21 A1A3F N02 H2 SING N N 22 A1A3F C03 H3 SING N N 23 A1A3F C05 H4 SING N N 24 A1A3F C07 H5 SING N N 25 A1A3F C07 H6 SING N N 26 A1A3F C07 H7 SING N N 27 A1A3F C12 H8 SING N N 28 A1A3F C14 H9 SING N N 29 A1A3F C16 H10 SING N N 30 A1A3F C19 H11 SING N N 31 A1A3F C19 H12 SING N N 32 A1A3F N20 H13 SING N N 33 A1A3F C21 H15 SING N N 34 A1A3F C21 H16 SING N N 35 A1A3F C21 H17 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A3F SMILES ACDLabs 14.52 "Cc1cc(nc(N)c1)c1cc(C#N)cc(CNC)c1" A1A3F InChI InChI 1.06 "InChI=1S/C15H16N4/c1-10-3-14(19-15(17)4-10)13-6-11(8-16)5-12(7-13)9-18-2/h3-7,18H,9H2,1-2H3,(H2,17,19)" A1A3F InChIKey InChI 1.06 KMIIYZIQKGGZIB-UHFFFAOYSA-N A1A3F SMILES_CANONICAL CACTVS 3.385 "CNCc1cc(cc(c1)c2cc(C)cc(N)n2)C#N" A1A3F SMILES CACTVS 3.385 "CNCc1cc(cc(c1)c2cc(C)cc(N)n2)C#N" A1A3F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(c1)N)c2cc(cc(c2)C#N)CNC" A1A3F SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(c1)N)c2cc(cc(c2)C#N)CNC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A3F "SYSTEMATIC NAME" ACDLabs 14.52 "(3P)-3-(6-amino-4-methylpyridin-2-yl)-5-[(methylamino)methyl]benzonitrile" A1A3F "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-(6-azanyl-4-methyl-pyridin-2-yl)-5-(methylaminomethyl)benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A3F "Create component" 2024-08-23 RCSB A1A3F "Initial release" 2025-04-30 RCSB #