data_A1A4X # _chem_comp.id A1A4X _chem_comp.name "benzyl (3-{5-carbamoyl-2-[(1-ethyl-3-methyl-1H-pyrazole-5-carbonyl)amino]-7-methoxy-1H-1,3-benzimidazol-1-yl}propyl)carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H31 N7 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-05 _chem_comp.pdbx_modified_date 2025-06-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 533.579 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A4X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9CUE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A4X N1 N1 N 0 1 Y N N N N N 18.035 -29.340 -1.145 -3.583 -0.260 -0.275 N1 A1A4X 1 A1A4X C7 C1 C 0 1 Y N N N N N 14.554 -31.297 -2.200 -2.913 -4.310 0.108 C7 A1A4X 2 A1A4X C8 C2 C 0 1 Y N N N N N 23.207 -28.313 -0.202 -1.574 4.452 0.624 C8 A1A4X 3 A1A4X N2 N2 N 0 1 Y N N N N N 24.462 -29.470 -1.673 -2.901 6.073 -0.005 N2 A1A4X 4 A1A4X C9 C3 C 0 1 Y N N N N N 14.398 -30.069 -1.564 -4.061 -3.947 -0.607 C9 A1A4X 5 A1A4X O1 O1 O 0 1 N N N N N N 12.772 -28.343 -1.543 -5.939 -4.680 -1.786 O1 A1A4X 6 A1A4X C1 C4 C 0 1 Y N N N N N 15.991 -40.953 -2.106 9.667 -0.069 -2.257 C1 A1A4X 7 A1A4X O5 O2 O 0 1 N N N N N N 17.660 -36.716 -0.061 5.387 -0.296 0.217 O5 A1A4X 8 A1A4X C5 C5 C 0 1 Y N N N N N 16.051 -38.793 -1.077 8.138 1.073 -0.811 C5 A1A4X 9 A1A4X C6 C6 C 0 1 Y N N N N N 15.517 -29.341 -1.173 -4.376 -2.604 -0.792 C6 A1A4X 10 A1A4X N3 N3 N 0 1 Y N N N N N 18.323 -31.257 -2.232 -1.785 -0.812 0.844 N3 A1A4X 11 A1A4X C4 C7 C 0 1 Y N N N N N 17.850 -40.318 -0.736 8.319 -1.313 -0.718 C4 A1A4X 12 A1A4X O4 O3 O 0 1 N N N N N N 16.047 -32.966 -3.113 -0.971 -3.696 1.327 O4 A1A4X 13 A1A4X C3 C8 C 0 1 Y N N N N N 15.412 -39.727 -1.876 9.097 1.107 -1.806 C3 A1A4X 14 A1A4X O3 O4 O 0 1 N N N N N N 19.777 -36.026 0.399 4.511 -0.283 2.257 O3 A1A4X 15 A1A4X C2 C9 C 0 1 Y N N N N N 17.208 -41.251 -1.534 9.278 -1.279 -1.713 C2 A1A4X 16 A1A4X N4 N4 N 0 1 Y N N N N N 23.135 -29.698 -1.892 -3.530 4.977 -0.234 N4 A1A4X 17 A1A4X C10 C10 C 0 1 Y N N N N N 17.282 -39.075 -0.504 7.749 -0.137 -0.267 C10 A1A4X 18 A1A4X C11 C11 C 0 1 Y N N N N N 16.781 -29.863 -1.423 -3.543 -1.619 -0.262 C11 A1A4X 19 A1A4X C12 C12 C 0 1 Y N N N N N 16.945 -31.053 -2.098 -2.393 -1.991 0.454 C12 A1A4X 20 A1A4X C13 C13 C 0 1 Y N N N N N 15.814 -31.779 -2.481 -2.086 -3.339 0.634 C13 A1A4X 21 A1A4X C14 C14 C 0 1 Y N N N N N 22.357 -29.011 -1.013 -2.755 3.916 0.140 C14 A1A4X 22 A1A4X C15 C15 C 0 1 Y N N N N N 24.500 -28.628 -0.647 -1.722 5.836 0.511 C15 A1A4X 23 A1A4X C16 C16 C 0 1 Y N N N N N 18.975 -30.170 -1.655 -2.551 0.215 0.374 C16 A1A4X 24 A1A4X C17 C17 C 0 1 N N N N N N 13.020 -29.538 -1.305 -4.941 -4.993 -1.166 C17 A1A4X 25 A1A4X C18 C18 C 0 1 N N N N N N 20.870 -29.026 -1.005 -3.105 2.491 0.046 C18 A1A4X 26 A1A4X C19 C19 C 0 1 N N N N N N 18.645 -35.796 0.022 4.335 -0.343 1.056 C19 A1A4X 27 A1A4X C20 C20 C 0 1 N N N N N N 25.812 -28.145 -0.113 -0.704 6.873 0.911 C20 A1A4X 28 A1A4X C21 C21 C 0 1 N N N N N N 23.067 -32.052 -2.675 -4.780 4.911 -2.335 C21 A1A4X 29 A1A4X C22 C22 C 0 1 N N N N N N 15.309 -34.098 -2.665 -0.719 -5.095 1.472 C22 A1A4X 30 A1A4X C23 C23 C 0 1 N N N N N N 17.996 -38.070 0.348 6.703 -0.173 0.818 C23 A1A4X 31 A1A4X C24 C24 C 0 1 N N N N N N 19.720 -33.261 -1.762 0.648 -0.636 0.666 C24 A1A4X 32 A1A4X C25 C25 C 0 1 N N N N N N 22.768 -30.597 -2.992 -4.875 4.880 -0.809 C25 A1A4X 33 A1A4X C26 C26 C 0 1 N N N N N N 19.005 -32.426 -2.806 -0.548 -0.689 1.619 C26 A1A4X 34 A1A4X C27 C27 C 0 1 N N N N N N 19.050 -33.419 -0.402 1.940 -0.507 1.476 C27 A1A4X 35 A1A4X N5 N5 N 0 1 N N N N N N 12.107 -30.383 -0.838 -4.639 -6.294 -0.988 N5 A1A4X 36 A1A4X N6 N6 N 0 1 N N N N N N 20.286 -30.074 -1.625 -2.276 1.559 0.556 N6 A1A4X 37 A1A4X N7 N7 N 0 1 N N N N N N 18.191 -34.594 -0.361 3.085 -0.456 0.563 N7 A1A4X 38 A1A4X O2 O5 O 0 1 N N N N N N 20.286 -28.090 -0.466 -4.143 2.153 -0.491 O2 A1A4X 39 A1A4X H7 H2 H 0 1 N N N N N N 13.684 -31.875 -2.475 -2.674 -5.354 0.249 H7 A1A4X 40 A1A4X H8 H3 H 0 1 N N N N N N 22.939 -27.656 0.612 -0.721 3.914 1.011 H8 A1A4X 41 A1A4X H1 H4 H 0 1 N N N N N N 15.494 -41.679 -2.732 10.413 -0.043 -3.037 H1 A1A4X 42 A1A4X H5 H5 H 0 1 N N N N N N 15.586 -37.835 -0.898 7.693 1.992 -0.459 H5 A1A4X 43 A1A4X H6 H6 H 0 1 N N N N N N 15.406 -28.385 -0.683 -5.262 -2.326 -1.344 H6 A1A4X 44 A1A4X H4 H7 H 0 1 N N N N N N 18.803 -40.562 -0.290 8.014 -2.258 -0.293 H4 A1A4X 45 A1A4X H3 H8 H 0 1 N N N N N N 14.456 -39.492 -2.320 9.402 2.052 -2.231 H3 A1A4X 46 A1A4X H2 H9 H 0 1 N N N N N N 17.663 -42.215 -1.708 9.723 -2.198 -2.065 H2 A1A4X 47 A1A4X H11 H10 H 0 1 N N N N N N 26.632 -28.593 -0.694 -0.865 7.158 1.951 H11 A1A4X 48 A1A4X H10 H11 H 0 1 N N N N N N 25.860 -27.049 -0.195 0.299 6.460 0.798 H10 A1A4X 49 A1A4X H9 H12 H 0 1 N N N N N N 25.908 -28.438 0.943 -0.809 7.750 0.273 H9 A1A4X 50 A1A4X H13 H13 H 0 1 N N N N N N 22.775 -32.681 -3.528 -5.780 4.838 -2.763 H13 A1A4X 51 A1A4X H12 H14 H 0 1 N N N N N N 24.144 -32.172 -2.483 -4.317 5.845 -2.652 H12 A1A4X 52 A1A4X H14 H15 H 0 1 N N N N N N 22.500 -32.357 -1.783 -4.177 4.070 -2.679 H14 A1A4X 53 A1A4X H15 H16 H 0 1 N N N N N N 15.594 -34.980 -3.257 0.198 -5.241 2.043 H15 A1A4X 54 A1A4X H16 H17 H 0 1 N N N N N N 15.529 -34.282 -1.603 -1.552 -5.562 1.997 H16 A1A4X 55 A1A4X H17 H18 H 0 1 N N N N N N 14.233 -33.906 -2.788 -0.609 -5.548 0.487 H17 A1A4X 56 A1A4X H19 H19 H 0 1 N N N N N N 17.702 -38.213 1.398 6.753 0.746 1.401 H19 A1A4X 57 A1A4X H18 H20 H 0 1 N N N N N N 19.081 -38.218 0.248 6.886 -1.027 1.470 H18 A1A4X 58 A1A4X H20 H21 H 0 1 N N N N N N 19.853 -34.269 -2.182 0.681 -1.550 0.073 H20 A1A4X 59 A1A4X H21 H22 H 0 1 N N N N N N 20.705 -32.802 -1.592 0.547 0.224 0.004 H21 A1A4X 60 A1A4X H23 H23 H 0 1 N N N N N N 23.335 -30.307 -3.889 -5.338 3.946 -0.492 H23 A1A4X 61 A1A4X H22 H24 H 0 1 N N N N N N 21.691 -30.493 -3.189 -5.478 5.720 -0.465 H22 A1A4X 62 A1A4X H25 H25 H 0 1 N N N N N N 18.257 -33.057 -3.309 -0.580 0.225 2.213 H25 A1A4X 63 A1A4X H24 H26 H 0 1 N N N N N N 19.744 -32.076 -3.542 -0.447 -1.549 2.282 H24 A1A4X 64 A1A4X H27 H27 H 0 1 N N N N N N 19.828 -33.518 0.370 1.908 0.407 2.069 H27 A1A4X 65 A1A4X H26 H28 H 0 1 N N N N N N 18.442 -32.525 -0.197 2.041 -1.367 2.138 H26 A1A4X 66 A1A4X H29 H29 H 0 1 N N N N N N 11.175 -30.066 -0.663 -3.843 -6.543 -0.493 H29 A1A4X 67 A1A4X H28 H30 H 0 1 N N N N N N 12.352 -31.336 -0.661 -5.217 -6.981 -1.355 H28 A1A4X 68 A1A4X H30 H31 H 0 1 N N N N N N 20.850 -30.776 -2.061 -1.487 1.830 1.051 H30 A1A4X 69 A1A4X H31 H32 H 0 1 N N N N N N 17.232 -34.501 -0.627 2.944 -0.504 -0.395 H31 A1A4X 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A4X O4 C22 SING N N 1 A1A4X O4 C13 SING N N 2 A1A4X C25 C21 SING N N 3 A1A4X C25 N4 SING N N 4 A1A4X C26 N3 SING N N 5 A1A4X C26 C24 SING N N 6 A1A4X C13 C7 DOUB Y N 7 A1A4X C13 C12 SING Y N 8 A1A4X N3 C12 SING Y N 9 A1A4X N3 C16 SING Y N 10 A1A4X C7 C9 SING Y N 11 A1A4X C1 C3 DOUB Y N 12 A1A4X C1 C2 SING Y N 13 A1A4X C12 C11 DOUB Y N 14 A1A4X N4 N2 SING Y N 15 A1A4X N4 C14 SING Y N 16 A1A4X C3 C5 SING Y N 17 A1A4X C24 C27 SING N N 18 A1A4X N2 C15 DOUB Y N 19 A1A4X C16 N6 SING N N 20 A1A4X C16 N1 DOUB Y N 21 A1A4X N6 C18 SING N N 22 A1A4X C9 C17 SING N N 23 A1A4X C9 C6 DOUB Y N 24 A1A4X O1 C17 DOUB N N 25 A1A4X C2 C4 DOUB Y N 26 A1A4X C11 C6 SING Y N 27 A1A4X C11 N1 SING Y N 28 A1A4X C17 N5 SING N N 29 A1A4X C5 C10 DOUB Y N 30 A1A4X C14 C18 SING N N 31 A1A4X C14 C8 DOUB Y N 32 A1A4X C18 O2 DOUB N N 33 A1A4X C4 C10 SING Y N 34 A1A4X C15 C8 SING Y N 35 A1A4X C15 C20 SING N N 36 A1A4X C10 C23 SING N N 37 A1A4X C27 N7 SING N N 38 A1A4X N7 C19 SING N N 39 A1A4X O5 C19 SING N N 40 A1A4X O5 C23 SING N N 41 A1A4X C19 O3 DOUB N N 42 A1A4X C7 H7 SING N N 43 A1A4X C8 H8 SING N N 44 A1A4X C1 H1 SING N N 45 A1A4X C5 H5 SING N N 46 A1A4X C6 H6 SING N N 47 A1A4X C4 H4 SING N N 48 A1A4X C3 H3 SING N N 49 A1A4X C2 H2 SING N N 50 A1A4X C20 H11 SING N N 51 A1A4X C20 H10 SING N N 52 A1A4X C20 H9 SING N N 53 A1A4X C21 H13 SING N N 54 A1A4X C21 H12 SING N N 55 A1A4X C21 H14 SING N N 56 A1A4X C22 H15 SING N N 57 A1A4X C22 H16 SING N N 58 A1A4X C22 H17 SING N N 59 A1A4X C23 H19 SING N N 60 A1A4X C23 H18 SING N N 61 A1A4X C24 H20 SING N N 62 A1A4X C24 H21 SING N N 63 A1A4X C25 H23 SING N N 64 A1A4X C25 H22 SING N N 65 A1A4X C26 H25 SING N N 66 A1A4X C26 H24 SING N N 67 A1A4X C27 H27 SING N N 68 A1A4X C27 H26 SING N N 69 A1A4X N5 H29 SING N N 70 A1A4X N5 H28 SING N N 71 A1A4X N6 H30 SING N N 72 A1A4X N7 H31 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A4X SMILES ACDLabs 14.52 "Cc1cc(C(=O)Nc2nc3cc(cc(OC)c3n2CCCNC(=O)OCc2ccccc2)C(N)=O)n(CC)n1" A1A4X InChI InChI 1.06 "InChI=1S/C27H31N7O5/c1-4-34-21(13-17(2)32-34)25(36)31-26-30-20-14-19(24(28)35)15-22(38-3)23(20)33(26)12-8-11-29-27(37)39-16-18-9-6-5-7-10-18/h5-7,9-10,13-15H,4,8,11-12,16H2,1-3H3,(H2,28,35)(H,29,37)(H,30,31,36)" A1A4X InChIKey InChI 1.06 KYPRTXHJJCGCSW-UHFFFAOYSA-N A1A4X SMILES_CANONICAL CACTVS 3.385 "CCn1nc(C)cc1C(=O)Nc2nc3cc(cc(OC)c3n2CCCNC(=O)OCc4ccccc4)C(N)=O" A1A4X SMILES CACTVS 3.385 "CCn1nc(C)cc1C(=O)Nc2nc3cc(cc(OC)c3n2CCCNC(=O)OCc4ccccc4)C(N)=O" A1A4X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCn1c(cc(n1)C)C(=O)Nc2nc3cc(cc(c3n2CCCNC(=O)OCc4ccccc4)OC)C(=O)N" A1A4X SMILES "OpenEye OEToolkits" 2.0.7 "CCn1c(cc(n1)C)C(=O)Nc2nc3cc(cc(c3n2CCCNC(=O)OCc4ccccc4)OC)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A4X "SYSTEMATIC NAME" ACDLabs 14.52 "benzyl (3-{5-carbamoyl-2-[(1-ethyl-3-methyl-1H-pyrazole-5-carbonyl)amino]-7-methoxy-1H-1,3-benzimidazol-1-yl}propyl)carbamate" A1A4X "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) ~{N}-[3-[5-aminocarbonyl-2-[(2-ethyl-5-methyl-pyrazol-3-yl)carbonylamino]-7-methoxy-benzimidazol-1-yl]propyl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A4X "Create component" 2024-09-05 RCSB A1A4X "Initial release" 2025-06-18 RCSB #